RNA–Protein interactions for RNA: ENST00000523430.5

SQLE-206, Transcript of squalene epoxidase, humanhuman

TSL 2 BASIC

Gene SQLE, Length 1,879 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-206ENST00000523430 DUSP9Q99956 384 aaKnown RBP23.15■■□□□ 1.3
SQLE-206ENST00000523430 FGFBP2Q9BYJ0 223 aa23.15■■□□□ 1.3
SQLE-206ENST00000523430 ZNF408Q9H9D4 720 aa23.15■■□□□ 1.3
SQLE-206ENST00000523430 TESPA1A2RU30 521 aaPredicted RBP23.15■■□□□ 1.3
SQLE-206ENST00000523430 KCNJ18B7U540 433 aa23.15■■□□□ 1.3
SQLE-206ENST00000523430 KRT18P05783 430 aaKnown RBP23.15■■□□□ 1.3
SQLE-206ENST00000523430 PPP1R2P41236 205 aa23.15■■□□□ 1.3
SQLE-206ENST00000523430 GSDMDP57764 484 aa23.15■■□□□ 1.3
SQLE-206ENST00000523430 IRX3P78415 501 aaPredicted RBP23.15■■□□□ 1.3
SQLE-206ENST00000523430 KCNJ12Q14500 433 aa23.15■■□□□ 1.3
SQLE-206ENST00000523430 NR1I3Q14994 352 aa23.15■■□□□ 1.3
SQLE-206ENST00000523430 KRT31Q15323 416 aa23.15■■□□□ 1.3
SQLE-206ENST00000523430 ANKRD40Q6AI12 368 aa23.15■■□□□ 1.3
SQLE-206ENST00000523430 ARMCX5Q6P1M9 558 aa23.15■■□□□ 1.3
SQLE-206ENST00000523430 IRF2BP1Q8IU81 584 aa23.15■■□□□ 1.3
SQLE-206ENST00000523430 PIGOQ8TEQ8 1089 aa23.15■■□□□ 1.3
SQLE-206ENST00000523430 SEMA6BQ9H3T3 888 aa23.15■■□□□ 1.3
SQLE-206ENST00000523430 ADD3Q9UEY8 706 aaKnown RBP23.15■■□□□ 1.3
SQLE-206ENST00000523430 AGTPBP1Q9UPW5 1226 aa23.15■■□□□ 1.3
SQLE-206ENST00000523430 FRMD3A2A2Y4 597 aa23.14■■□□□ 1.29
SQLE-206ENST00000523430 EYA4O95677 639 aa23.14■■□□□ 1.29
SQLE-206ENST00000523430 CCND2P30279 289 aa23.14■■□□□ 1.29
SQLE-206ENST00000523430 GJA5P36382 358 aa23.14■■□□□ 1.29
SQLE-206ENST00000523430 LRRC41Q15345 812 aa23.14■■□□□ 1.29
SQLE-206ENST00000523430 EPHA7Q15375 998 aa23.14■■□□□ 1.29
SQLE-206ENST00000523430 TCP11X2Q5H9J9 407 aa23.14■■□□□ 1.29
SQLE-206ENST00000523430 LDLRAD1Q5T700 205 aa23.14■■□□□ 1.29
SQLE-206ENST00000523430 BANK1Q8NDB2 785 aa23.14■■□□□ 1.29
SQLE-206ENST00000523430 REEP2Q9BRK0 252 aa23.14■■□□□ 1.29
SQLE-206ENST00000523430 RUSC1Q9BVN2 902 aa23.14■■□□□ 1.29
SQLE-206ENST00000523430 ASCC2Q9H1I8 757 aaPredicted RBP23.14■■□□□ 1.29
SQLE-206ENST00000523430 LIMA1Q9UHB6 759 aaKnown RBP23.14■■□□□ 1.29
SQLE-206ENST00000523430 BICDL2A1A5D9 508 aa23.13■■□□□ 1.29
SQLE-206ENST00000523430 ZBTB39O15060 712 aa23.13■■□□□ 1.29
SQLE-206ENST00000523430 TEX33O43247 280 aa23.13■■□□□ 1.29
SQLE-206ENST00000523430 NR3C2P08235 984 aa23.13■■□□□ 1.29
SQLE-206ENST00000523430 PSMD2Q13200 908 aa23.13■■□□□ 1.29
SQLE-206ENST00000523430 FAM26FQ5R3K3 315 aa23.13■■□□□ 1.29
SQLE-206ENST00000523430 CCDC65Q8IXS2 484 aa23.13■■□□□ 1.29
SQLE-206ENST00000523430 LXNQ9BS40 222 aa23.13■■□□□ 1.29
SQLE-206ENST00000523430 TAB2Q9NYJ8 693 aa23.13■■□□□ 1.29
SQLE-206ENST00000523430 TBC1D7Q9P0N9 293 aa23.13■■□□□ 1.29
SQLE-206ENST00000523430 GIT2Q14161 759 aa23.13■■□□□ 1.29
SQLE-206ENST00000523430 VSIG10LQ86VR7 867 aa23.13■■□□□ 1.29
SQLE-206ENST00000523430 GUF1Q8N442 669 aaKnown RBP23.13■■□□□ 1.29
SQLE-206ENST00000523430 CSGALNACT2Q8N6G5 542 aa23.13■■□□□ 1.29
SQLE-206ENST00000523430 MB21D1Q8N884 522 aa23.13■■□□□ 1.29
SQLE-206ENST00000523430 KIAA1524Q8TCG1 905 aa23.13■■□□□ 1.29
SQLE-206ENST00000523430 NSUN6Q8TEA1 469 aaKnown RBP23.13■■□□□ 1.29
SQLE-206ENST00000523430 EEF2KMTQ96G04 330 aa23.13■■□□□ 1.29
SQLE-206ENST00000523430 SRRTQ9BXP5 876 aaKnown RBP23.13■■□□□ 1.29
SQLE-206ENST00000523430 PCDHA2Q9Y5H9 948 aa23.13■■□□□ 1.29
SQLE-206ENST00000523430 ATP9AO75110 1047 aa23.12■■□□□ 1.29
SQLE-206ENST00000523430 HERVK_113P62684 666 aa23.12■■□□□ 1.29
SQLE-206ENST00000523430 CCZ1BP86790 482 aa23.12■■□□□ 1.29
SQLE-206ENST00000523430 CCZ1P86791 482 aaPredicted RBP23.12■■□□□ 1.29
SQLE-206ENST00000523430 SPAG1Q07617 926 aa23.12■■□□□ 1.29
SQLE-206ENST00000523430 XRRA1Q6P2D8 792 aa23.12■■□□□ 1.29
SQLE-206ENST00000523430 MIER3Q7Z3K6 550 aa23.12■■□□□ 1.29
SQLE-206ENST00000523430 RIOX2Q8IUF8 465 aa23.12■■□□□ 1.29
SQLE-206ENST00000523430 CCDC150Q8NCX0 1101 aa23.12■■□□□ 1.29
SQLE-206ENST00000523430 CHST13Q8NET6 341 aa23.12■■□□□ 1.29
SQLE-206ENST00000523430 CTAGE1Q96RT6 745 aa23.12■■□□□ 1.29
SQLE-206ENST00000523430 PAGR1Q9BTK6 254 aa23.12■■□□□ 1.29
SQLE-206ENST00000523430 SPATC1LQ9H0A9 340 aa23.12■■□□□ 1.29
SQLE-206ENST00000523430 THAP9Q9H5L6 903 aa23.12■■□□□ 1.29
SQLE-206ENST00000523430 CNMDO75829 334 aa23.11■■□□□ 1.29
SQLE-206ENST00000523430 CENPPQ6IPU0 288 aa23.11■■□□□ 1.29
SQLE-206ENST00000523430 CREBRFQ8IUR6 639 aa23.11■■□□□ 1.29
SQLE-206ENST00000523430 ZHX3Q9H4I2 956 aa23.11■■□□□ 1.29
SQLE-206ENST00000523430 COPB1P53618 953 aaKnown RBP23.11■■□□□ 1.29
SQLE-206ENST00000523430 HERC4Q5GLZ8 1057 aaPredicted RBP23.11■■□□□ 1.29
SQLE-206ENST00000523430 SPECC1LQ69YQ0 1117 aa23.11■■□□□ 1.29
SQLE-206ENST00000523430 KCTD17Q8N5Z5 321 aa23.11■■□□□ 1.29
SQLE-206ENST00000523430 ASTN1O14525 1302 aa23.1■■□□□ 1.29
SQLE-206ENST00000523430 RSPH10B2B2RC85 870 aa23.1■■□□□ 1.29
SQLE-206ENST00000523430 RSPH10BP0C881 870 aa23.1■■□□□ 1.29
SQLE-206ENST00000523430 GOLGA8FQ08AF8 430 aa23.1■■□□□ 1.29
SQLE-206ENST00000523430 GOLGA8DPQ0D2H9 430 aa23.1■■□□□ 1.29
SQLE-206ENST00000523430 GPAT2Q6NUI2 795 aa23.1■■□□□ 1.29
SQLE-206ENST00000523430 INPP4AQ96PE3 977 aaPredicted RBP23.1■■□□□ 1.29
SQLE-206ENST00000523430 VPS16Q9H269 839 aa23.1■■□□□ 1.29
SQLE-206ENST00000523430 TBC1D22BQ9NU19 505 aa23.1■■□□□ 1.29
SQLE-206ENST00000523430 RGS20O76081 388 aa23.09■■□□□ 1.29
SQLE-206ENST00000523430 MUTP22033 750 aa23.09■■□□□ 1.29
SQLE-206ENST00000523430 SFPQP23246 707 aaKnown RBP eCLIP23.09■■□□□ 1.29
SQLE-206ENST00000523430 TBX2Q13207 712 aaPredicted RBP23.09■■□□□ 1.29
SQLE-206ENST00000523430 RINT1Q6NUQ1 792 aa23.09■■□□□ 1.29
SQLE-206ENST00000523430 MYOCDQ8IZQ8 938 aa23.09■■□□□ 1.29
SQLE-206ENST00000523430 ANKRD35Q8N283 1001 aa23.09■■□□□ 1.29
SQLE-206ENST00000523430 ANKRD20A12PQ8NF67 263 aa23.09■■□□□ 1.29
SQLE-206ENST00000523430 NEK9Q8TD19 979 aa23.09■■□□□ 1.29
SQLE-206ENST00000523430 NOC3LQ8WTT2 800 aaKnown RBP23.09■■□□□ 1.29
SQLE-206ENST00000523430 R3HDMLQ9H3Y0 253 aa23.09■■□□□ 1.29
SQLE-206ENST00000523430 LRRC10BA6NIK2 292 aa23.09■■□□□ 1.29
SQLE-206ENST00000523430 CCNE2O96020 404 aa23.09■■□□□ 1.29
SQLE-206ENST00000523430 PBX1P40424 430 aa23.09■■□□□ 1.29
SQLE-206ENST00000523430 CNTN2Q02246 1040 aa23.09■■□□□ 1.29
SQLE-206ENST00000523430 FILIP1LQ4L180 1135 aa23.09■■□□□ 1.29
SQLE-206ENST00000523430 NCAPG2Q86XI2 1143 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms