RNA–Protein interactions for RNA: ENST00000523125.5

VEGFA-223, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-223ENST00000523125 MXRA8Q9BRK3 442 aa14.17□□□□□ -0.14
VEGFA-223ENST00000523125 ANO3Q9BYT9 981 aa14.17□□□□□ -0.14
VEGFA-223ENST00000523125 SETD4Q9NVD3 440 aa14.17□□□□□ -0.14
VEGFA-223ENST00000523125 TMEM260Q9NX78 707 aa14.17□□□□□ -0.14
VEGFA-223ENST00000523125 VCANP13611 3396 aa14.17□□□□□ -0.14
VEGFA-223ENST00000523125 MYH9P35579 1960 aaKnown RBP14.16□□□□□ -0.14
VEGFA-223ENST00000523125 CCDC196A0A1B0GTZ2 297 aa14.16□□□□□ -0.14
VEGFA-223ENST00000523125 FOSP01100 380 aaPredicted RBP14.16□□□□□ -0.14
VEGFA-223ENST00000523125 SCG2P13521 617 aa14.16□□□□□ -0.14
VEGFA-223ENST00000523125 SREBF1P36956 1147 aa14.16□□□□□ -0.14
VEGFA-223ENST00000523125 WDR5P61964 334 aaKnown RBP14.16□□□□□ -0.14
VEGFA-223ENST00000523125 ADGRE1Q14246 886 aa14.16□□□□□ -0.14
VEGFA-223ENST00000523125 CNKSR3Q6P9H4 555 aa14.16□□□□□ -0.14
VEGFA-223ENST00000523125 HERC6Q8IVU3 1022 aa14.16□□□□□ -0.14
VEGFA-223ENST00000523125 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.16□□□□□ -0.143e-13■■□□□ 13.7
VEGFA-223ENST00000523125 USP38Q8NB14 1042 aa14.16□□□□□ -0.14
VEGFA-223ENST00000523125 OSBPL7Q9BZF2 842 aa14.16□□□□□ -0.14
VEGFA-223ENST00000523125 ZSWIM6Q9HCJ5 1215 aa14.16□□□□□ -0.14
VEGFA-223ENST00000523125 KCNH7Q9NS40 1196 aa14.16□□□□□ -0.14
VEGFA-223ENST00000523125 PKD2L1Q9P0L9 805 aa14.16□□□□□ -0.14
VEGFA-223ENST00000523125 MEIS1O00470 390 aa14.15□□□□□ -0.14
VEGFA-223ENST00000523125 PRPF3O43395 683 aaKnown RBP14.15□□□□□ -0.14
VEGFA-223ENST00000523125 ARHGEF15O94989 841 aa14.15□□□□□ -0.14
VEGFA-223ENST00000523125 CA3P07451 260 aa14.15□□□□□ -0.14
VEGFA-223ENST00000523125 ARP10275 920 aa14.15□□□□□ -0.14
VEGFA-223ENST00000523125 PSMA5P28066 241 aa14.15□□□□□ -0.14
VEGFA-223ENST00000523125 PDIA3P30101 505 aaKnown RBP14.15□□□□□ -0.14
VEGFA-223ENST00000523125 THPOP40225 353 aa14.15□□□□□ -0.14
VEGFA-223ENST00000523125 MKRN4PQ13434 485 aaPredicted RBP14.15□□□□□ -0.14
VEGFA-223ENST00000523125 TOB2Q14106 344 aaPredicted RBP14.15□□□□□ -0.14
VEGFA-223ENST00000523125 PPP2R2DQ66LE6 453 aa14.15□□□□□ -0.14
VEGFA-223ENST00000523125 RUFY3Q7L099 469 aa14.15□□□□□ -0.14
VEGFA-223ENST00000523125 LMBR1Q8WVP7 490 aa14.15□□□□□ -0.14
VEGFA-223ENST00000523125 CRYGNQ8WXF5 182 aa14.15□□□□□ -0.14
VEGFA-223ENST00000523125 SEPT1Q8WYJ6 367 aa14.15□□□□□ -0.14
VEGFA-223ENST00000523125 PHKBQ93100 1093 aa14.15□□□□□ -0.14
VEGFA-223ENST00000523125 PCYT2Q99447 389 aa14.15□□□□□ -0.14
VEGFA-223ENST00000523125 ZMYND12Q9H0C1 365 aa14.15□□□□□ -0.14
VEGFA-223ENST00000523125 EHMT1Q9H9B1 1298 aa14.15□□□□□ -0.14
VEGFA-223ENST00000523125 ZNF215Q9UL58 517 aaPredicted RBP14.15□□□□□ -0.14
VEGFA-223ENST00000523125 EVPLQ92817 2033 aa14.14□□□□□ -0.15
VEGFA-223ENST00000523125 ABHD14A-ACY1A0A1B0GW23 586 aa14.14□□□□□ -0.15
VEGFA-223ENST00000523125 ESYT2A0FGR8 921 aa14.14□□□□□ -0.15
VEGFA-223ENST00000523125 RSPH10B2B2RC85 870 aa14.14□□□□□ -0.15
VEGFA-223ENST00000523125 DLL1O00548 723 aa14.14□□□□□ -0.15
VEGFA-223ENST00000523125 RSPH10BP0C881 870 aa14.14□□□□□ -0.15
VEGFA-223ENST00000523125 DEFB103AP81534 67 aa14.14□□□□□ -0.15
VEGFA-223ENST00000523125 ITGB3BPQ13352 177 aaPredicted RBP14.14□□□□□ -0.15
VEGFA-223ENST00000523125 AP3B2Q13367 1082 aa14.14□□□□□ -0.15
VEGFA-223ENST00000523125 CEP55Q53EZ4 464 aa14.14□□□□□ -0.15
VEGFA-223ENST00000523125 TMCO2Q7Z6W1 182 aaPredicted RBP14.14□□□□□ -0.15
VEGFA-223ENST00000523125 GLT8D2Q9H1C3 349 aa14.14□□□□□ -0.15
VEGFA-223ENST00000523125 NCOA5Q9HCD5 579 aaKnown RBP14.14□□□□□ -0.15
VEGFA-223ENST00000523125 PPP4R2Q9NY27 417 aa14.14□□□□□ -0.15
VEGFA-223ENST00000523125 NFASCO94856 1347 aa14.14□□□□□ -0.15
VEGFA-223ENST00000523125 NRCAMQ92823 1304 aa14.14□□□□□ -0.15
VEGFA-223ENST00000523125 COL4A4P53420 1690 aaPredicted RBP14.14□□□□□ -0.15
VEGFA-223ENST00000523125 PPFIA3O75145 1194 aa14.13□□□□□ -0.15
VEGFA-223ENST00000523125 LGR5O75473 907 aa14.13□□□□□ -0.15
VEGFA-223ENST00000523125 GNAT1P11488 350 aa14.13□□□□□ -0.15
VEGFA-223ENST00000523125 IFNAR1P17181 557 aa14.13□□□□□ -0.15
VEGFA-223ENST00000523125 KCNJ6P48051 423 aa14.13□□□□□ -0.15
VEGFA-223ENST00000523125 ARHGAP4P98171 946 aa14.13□□□□□ -0.15
VEGFA-223ENST00000523125 TAP1Q03518 808 aa14.13□□□□□ -0.15
VEGFA-223ENST00000523125 IKBKEQ14164 716 aa14.13□□□□□ -0.15
VEGFA-223ENST00000523125 PLEKHG4Q58EX7 1191 aa14.13□□□□□ -0.15
VEGFA-223ENST00000523125 JAKMIP3Q5VZ66 844 aa14.13□□□□□ -0.15
VEGFA-223ENST00000523125 DBF4BQ8NFT6 615 aa14.13□□□□□ -0.15
VEGFA-223ENST00000523125 GAS2L1Q99501 681 aaPredicted RBP14.13□□□□□ -0.15
VEGFA-223ENST00000523125 TM6SF1Q9BZW5 370 aa14.13□□□□□ -0.15
VEGFA-223ENST00000523125 SMARCAD1Q9H4L7 1026 aa14.13□□□□□ -0.15
VEGFA-223ENST00000523125 AGO4Q9HCK5 861 aaKnown RBP14.13□□□□□ -0.15
VEGFA-223ENST00000523125 JPH1Q9HDC5 661 aaPredicted RBP14.13□□□□□ -0.15
VEGFA-223ENST00000523125 ERAP1Q9NZ08 941 aa14.13□□□□□ -0.15
VEGFA-223ENST00000523125 SLC9A2Q9UBY0 812 aa14.13□□□□□ -0.15
VEGFA-223ENST00000523125 EMSYQ7Z589 1322 aa14.13□□□□□ -0.15
VEGFA-223ENST00000523125 CUL9Q8IWT3 2517 aa14.12□□□□□ -0.15
VEGFA-223ENST00000523125 XIRP2A4UGR9 3374 aa14.12□□□□□ -0.15
VEGFA-223ENST00000523125 IGLV3-22A0A075B6J6 115 aa14.12□□□□□ -0.15
VEGFA-223ENST00000523125 FAM86B1E9PN63 330 aa14.12□□□□□ -0.15
VEGFA-223ENST00000523125 CAND2O75155 1236 aa14.12□□□□□ -0.15
VEGFA-223ENST00000523125 ATG7O95352 703 aa14.12□□□□□ -0.15
VEGFA-223ENST00000523125 CYP3A4P08684 503 aa14.12□□□□□ -0.15
VEGFA-223ENST00000523125 FAM86B2P0C5J1 330 aa14.12□□□□□ -0.15
VEGFA-223ENST00000523125 MARK3P27448 753 aa14.12□□□□□ -0.15
VEGFA-223ENST00000523125 ACTR2P61160 394 aa14.12□□□□□ -0.15
VEGFA-223ENST00000523125 CCT2P78371 535 aaKnown RBP14.12□□□□□ -0.15
VEGFA-223ENST00000523125 FAM26DQ5JW98 314 aa14.12□□□□□ -0.15
VEGFA-223ENST00000523125 MARCH8Q5T0T0 291 aa14.12□□□□□ -0.15
VEGFA-223ENST00000523125 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.12□□□□□ -0.155e-35■■■□□ 16.9
VEGFA-223ENST00000523125 RUFY4Q6ZNE9 571 aa14.12□□□□□ -0.15
VEGFA-223ENST00000523125 NIPA1Q7RTP0 329 aa14.12□□□□□ -0.15
VEGFA-223ENST00000523125 SPRED2Q7Z698 418 aa14.12□□□□□ -0.15
VEGFA-223ENST00000523125 GLG1Q92896 1179 aa14.12□□□□□ -0.15
VEGFA-223ENST00000523125 LARP6Q9BRS8 491 aaKnown RBP14.12□□□□□ -0.15
VEGFA-223ENST00000523125 RNF26Q9BY78 433 aaPredicted RBP14.12□□□□□ -0.15
VEGFA-223ENST00000523125 CYP46A1Q9Y6A2 500 aa14.12□□□□□ -0.15
VEGFA-223ENST00000523125 PRRC2BQ5JSZ5 2229 aaKnown RBP14.12□□□□□ -0.15
VEGFA-223ENST00000523125 NLRC5Q86WI3 1866 aa14.12□□□□□ -0.15
VEGFA-223ENST00000523125 LCHNA4D1U4 455 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms