RNA–Protein interactions for RNA: ENST00000522371.5

HDAC2-213, Transcript of histone deacetylase 2, humanhuman

TSL 4

Gene HDAC2, Length 502 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-213ENST00000522371 CDSNQ15517 529 aa4.87□□□□□ -1.63
HDAC2-213ENST00000522371 MRM1Q6IN84 353 aaKnown RBP4.87□□□□□ -1.63
HDAC2-213ENST00000522371 CRIP3Q6Q6R5 217 aa4.87□□□□□ -1.63
HDAC2-213ENST00000522371 SRPK1Q96SB4 655 aaKnown RBP4.87□□□□□ -1.63
HDAC2-213ENST00000522371 CDIP1Q9H305 208 aa4.87□□□□□ -1.63
HDAC2-213ENST00000522371 WASF3Q9UPY6 502 aa4.87□□□□□ -1.63
HDAC2-213ENST00000522371 CDK11AQ9UQ88 783 aaPredicted RBP4.87□□□□□ -1.63
HDAC2-213ENST00000522371 FZD7O75084 574 aa4.86□□□□□ -1.63
HDAC2-213ENST00000522371 ZNF623O75123 536 aa4.86□□□□□ -1.63
HDAC2-213ENST00000522371 FBXO21O94952 628 aa4.86□□□□□ -1.63
HDAC2-213ENST00000522371 SELENOPP49908 381 aa4.86□□□□□ -1.63
HDAC2-213ENST00000522371 HMGA2P52926 109 aa4.86□□□□□ -1.63
HDAC2-213ENST00000522371 PPP2R2AP63151 447 aa4.86□□□□□ -1.63
HDAC2-213ENST00000522371 RAB33AQ14088 237 aa4.86□□□□□ -1.63
HDAC2-213ENST00000522371 SMAD2Q15796 467 aaKnown RBP4.86□□□□□ -1.63
HDAC2-213ENST00000522371 SLC10A6Q3KNW5 377 aa4.86□□□□□ -1.63
HDAC2-213ENST00000522371 ZNF585AQ6P3V2 769 aa4.86□□□□□ -1.63
HDAC2-213ENST00000522371 DTX3Q8N9I9 347 aa4.86□□□□□ -1.63
HDAC2-213ENST00000522371 ARMC5Q96C12 935 aa4.86□□□□□ -1.63
HDAC2-213ENST00000522371 JAM3Q9BX67 310 aa4.86□□□□□ -1.63
HDAC2-213ENST00000522371 PDGFDQ9GZP0 370 aaPredicted RBP4.86□□□□□ -1.63
HDAC2-213ENST00000522371 VPS11Q9H270 941 aa4.86□□□□□ -1.63
HDAC2-213ENST00000522371 SEC61A2Q9H9S3 476 aa4.86□□□□□ -1.63
HDAC2-213ENST00000522371 TESMINQ9Y4I5 508 aa4.86□□□□□ -1.63
HDAC2-213ENST00000522371 SLC27A2O14975 620 aa4.85□□□□□ -1.63
HDAC2-213ENST00000522371 MUSKO15146 869 aa4.85□□□□□ -1.63
HDAC2-213ENST00000522371 KLHL18O94889 574 aa4.85□□□□□ -1.63
HDAC2-213ENST00000522371 GJB6O95452 261 aa4.85□□□□□ -1.63
HDAC2-213ENST00000522371 ENO2P09104 434 aaPredicted RBP4.85□□□□□ -1.63
HDAC2-213ENST00000522371 COL6A1P12109 1028 aa4.85□□□□□ -1.63
HDAC2-213ENST00000522371 ACVRL1P37023 503 aa4.85□□□□□ -1.63
HDAC2-213ENST00000522371 SPIRE1Q08AE8 756 aa4.85□□□□□ -1.63
HDAC2-213ENST00000522371 HSP90AA2PQ14568 343 aaPredicted RBP4.85□□□□□ -1.63
HDAC2-213ENST00000522371 HS1BP3Q53T59 392 aa4.85□□□□□ -1.63
HDAC2-213ENST00000522371 SOGA3Q5TF21 947 aa4.85□□□□□ -1.63
HDAC2-213ENST00000522371 Q6ZUG5 572 aa4.85□□□□□ -1.63
HDAC2-213ENST00000522371 OTOP3Q7RTS5 596 aa4.85□□□□□ -1.63
HDAC2-213ENST00000522371 RALYLQ86SE5 291 aaKnown RBP4.85□□□□□ -1.63
HDAC2-213ENST00000522371 PROSER1Q86XN7 944 aa4.85□□□□□ -1.63
HDAC2-213ENST00000522371 NUDT10Q8NFP7 164 aa4.85□□□□□ -1.63
HDAC2-213ENST00000522371 PIP4K2CQ8TBX8 421 aa4.85□□□□□ -1.63
HDAC2-213ENST00000522371 CLEC4DQ8WXI8 215 aa4.85□□□□□ -1.63
HDAC2-213ENST00000522371 NUDT11Q96G61 164 aa4.85□□□□□ -1.63
HDAC2-213ENST00000522371 MRFAP1L1Q96HT8 127 aa4.85□□□□□ -1.63
HDAC2-213ENST00000522371 AJUBAQ96IF1 538 aa4.85□□□□□ -1.63
HDAC2-213ENST00000522371 IER2Q9BTL4 223 aa4.85□□□□□ -1.63
HDAC2-213ENST00000522371 ZNF747Q9BV97 191 aa4.85□□□□□ -1.63
HDAC2-213ENST00000522371 A0A1W2PQU0 124 aa4.84□□□□□ -1.63
HDAC2-213ENST00000522371 DLX3O60479 287 aa4.84□□□□□ -1.63
HDAC2-213ENST00000522371 AMHP03971 560 aa4.84□□□□□ -1.63
HDAC2-213ENST00000522371 CKMP06732 381 aa4.84□□□□□ -1.63
HDAC2-213ENST00000522371 FAHP16930 419 aa4.84□□□□□ -1.63
HDAC2-213ENST00000522371 GRIA2P42262 883 aa4.84□□□□□ -1.63
HDAC2-213ENST00000522371 GRIN1Q05586 938 aa4.84□□□□□ -1.63
HDAC2-213ENST00000522371 KIZQ2M2Z5 673 aa4.84□□□□□ -1.63
HDAC2-213ENST00000522371 PAN2Q504Q3 1202 aaKnown RBP4.84□□□□□ -1.63
HDAC2-213ENST00000522371 USP53Q70EK8 1073 aa4.84□□□□□ -1.63
HDAC2-213ENST00000522371 PALM2Q8IXS6 379 aa4.84□□□□□ -1.63
HDAC2-213ENST00000522371 Q8N1X5 172 aa4.84□□□□□ -1.63
HDAC2-213ENST00000522371 DCAF4Q8WV16 495 aa4.84□□□□□ -1.63
HDAC2-213ENST00000522371 SGSM3Q96HU1 749 aa4.84□□□□□ -1.63
HDAC2-213ENST00000522371 PTPN18Q99952 460 aa4.84□□□□□ -1.63
HDAC2-213ENST00000522371 ZFYVE21Q9BQ24 234 aa4.84□□□□□ -1.63
HDAC2-213ENST00000522371 PHF20Q9BVI0 1012 aa4.84□□□□□ -1.63
HDAC2-213ENST00000522371 MRIQ9BWK5 157 aa4.84□□□□□ -1.63
HDAC2-213ENST00000522371 SCAND2PQ9GZW5 306 aaPredicted RBP4.84□□□□□ -1.63
HDAC2-213ENST00000522371 RBPJLQ9UBG7 517 aa4.84□□□□□ -1.63
HDAC2-213ENST00000522371 PFDN2Q9UHV9 154 aa4.84□□□□□ -1.63
HDAC2-213ENST00000522371 MRPL42Q9Y6G3 142 aaKnown RBP4.84□□□□□ -1.63
HDAC2-213ENST00000522371 IQCA1LA6NCM1 817 aa4.83□□□□□ -1.64
HDAC2-213ENST00000522371 MSCO60682 206 aa4.83□□□□□ -1.64
HDAC2-213ENST00000522371 KNG1P01042 644 aa4.83□□□□□ -1.64
HDAC2-213ENST00000522371 GNAT1P11488 350 aa4.83□□□□□ -1.64
HDAC2-213ENST00000522371 GRK2P25098 689 aa4.83□□□□□ -1.64
HDAC2-213ENST00000522371 GRK3P35626 688 aa4.83□□□□□ -1.64
HDAC2-213ENST00000522371 TUSC3Q13454 348 aa4.83□□□□□ -1.64
HDAC2-213ENST00000522371 SERINC3Q13530 473 aa4.83□□□□□ -1.64
HDAC2-213ENST00000522371 R3HDM1Q15032 1099 aaKnown RBP4.83□□□□□ -1.64
HDAC2-213ENST00000522371 LBX2Q6XYB7 198 aa4.83□□□□□ -1.64
HDAC2-213ENST00000522371 REXO1L1PQ8IX06 675 aa4.83□□□□□ -1.64
HDAC2-213ENST00000522371 IFNL2Q8IZJ0 200 aa4.83□□□□□ -1.64
HDAC2-213ENST00000522371 UHMK1Q8TAS1 419 aaKnown RBP4.83□□□□□ -1.64
HDAC2-213ENST00000522371 Q8TCH9 128 aa4.83□□□□□ -1.64
HDAC2-213ENST00000522371 DEPDC7Q96QD5 511 aa4.83□□□□□ -1.64
HDAC2-213ENST00000522371 DNAJC7Q99615 494 aa4.83□□□□□ -1.64
HDAC2-213ENST00000522371 MEGF9Q9H1U4 602 aa4.83□□□□□ -1.64
HDAC2-213ENST00000522371 KANSL2Q9H9L4 492 aa4.83□□□□□ -1.64
HDAC2-213ENST00000522371 SNTG2Q9NY99 539 aa4.83□□□□□ -1.64
HDAC2-213ENST00000522371 SIRPGQ9P1W8 387 aa4.83□□□□□ -1.64
HDAC2-213ENST00000522371 ARHGAP20Q9P2F6 1191 aa4.83□□□□□ -1.64
HDAC2-213ENST00000522371 ZFP69BQ9UJL9 534 aa4.83□□□□□ -1.64
HDAC2-213ENST00000522371 SLC4A7Q9Y6M7 1214 aa4.83□□□□□ -1.64
HDAC2-213ENST00000522371 CNOT4O95628 575 aaKnown RBP4.82□□□□□ -1.64
HDAC2-213ENST00000522371 DDR2Q16832 855 aa4.82□□□□□ -1.64
HDAC2-213ENST00000522371 SKIDA1Q1XH10 827 aa4.82□□□□□ -1.64
HDAC2-213ENST00000522371 NOP9Q86U38 636 aaKnown RBP4.82□□□□□ -1.64
HDAC2-213ENST00000522371 JAZF1Q86VZ6 243 aa4.82□□□□□ -1.64
HDAC2-213ENST00000522371 ZFPM1Q8IX07 1006 aa4.82□□□□□ -1.64
HDAC2-213ENST00000522371 WWC2-AS2Q96NR7 200 aa4.82□□□□□ -1.64
HDAC2-213ENST00000522371 LMF1Q96S06 567 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms