RNA–Protein interactions for RNA: ENST00000521439.1

NUDCD1-204, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best)

Gene NUDCD1, Length 1,172 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-204ENST00000521439 NUDT19A8MXV4 375 aa9.09□□□□□ -0.95
NUDCD1-204ENST00000521439 ALG1L2C9J202 215 aa9.09□□□□□ -0.95
NUDCD1-204ENST00000521439 GPR39O43194 453 aa9.09□□□□□ -0.95
NUDCD1-204ENST00000521439 CLASP2O75122 1294 aaKnown RBP9.09□□□□□ -0.95
NUDCD1-204ENST00000521439 ZBTB7AO95365 584 aa9.09□□□□□ -0.95
NUDCD1-204ENST00000521439 ID4P47928 161 aa9.09□□□□□ -0.95
NUDCD1-204ENST00000521439 LSSP48449 732 aa9.09□□□□□ -0.95
NUDCD1-204ENST00000521439 EPHA5P54756 1037 aa9.09□□□□□ -0.95
NUDCD1-204ENST00000521439 OCRLQ01968 901 aa9.09□□□□□ -0.95
NUDCD1-204ENST00000521439 RAB3GAP1Q15042 981 aa9.09□□□□□ -0.95
NUDCD1-204ENST00000521439 PKN1Q16512 942 aa9.09□□□□□ -0.95
NUDCD1-204ENST00000521439 KCTD1Q719H9 257 aa9.09□□□□□ -0.95
NUDCD1-204ENST00000521439 MILR1Q7Z6M3 343 aa9.09□□□□□ -0.95
NUDCD1-204ENST00000521439 NOSTRINQ8IVI9 506 aa9.09□□□□□ -0.95
NUDCD1-204ENST00000521439 FBXO15Q8NCQ5 510 aaPredicted RBP9.09□□□□□ -0.95
NUDCD1-204ENST00000521439 DCP1AQ9NPI6 582 aaPredicted RBP9.09□□□□□ -0.95
NUDCD1-204ENST00000521439 TYW1Q9NV66 732 aaKnown RBP9.09□□□□□ -0.95
NUDCD1-204ENST00000521439 ASH2LQ9UBL3 628 aa9.09□□□□□ -0.95
NUDCD1-204ENST00000521439 APOBEC2Q9Y235 224 aaKnown RBP9.09□□□□□ -0.95
NUDCD1-204ENST00000521439 PCDHB4Q9Y5E5 795 aa9.09□□□□□ -0.95
NUDCD1-204ENST00000521439 ATP23Q9Y6H3 246 aa9.09□□□□□ -0.95
NUDCD1-204ENST00000521439 OR14I1A6ND48 311 aa9.08□□□□□ -0.96
NUDCD1-204ENST00000521439 H7C1D1 291 aa9.08□□□□□ -0.96
NUDCD1-204ENST00000521439 KRT37O76014 449 aa9.08□□□□□ -0.96
NUDCD1-204ENST00000521439 KPNA1P52294 538 aaPredicted RBP9.08□□□□□ -0.96
NUDCD1-204ENST00000521439 IRF9Q00978 393 aa9.08□□□□□ -0.96
NUDCD1-204ENST00000521439 CREB3L3Q68CJ9 461 aa9.08□□□□□ -0.96
NUDCD1-204ENST00000521439 RPTNQ6XPR3 784 aa9.08□□□□□ -0.96
NUDCD1-204ENST00000521439 LHFPL2Q6ZUX7 228 aa9.08□□□□□ -0.96
NUDCD1-204ENST00000521439 TRIM48Q8IWZ4 208 aa9.08□□□□□ -0.96
NUDCD1-204ENST00000521439 RBM12BQ8IXT5 1001 aaKnown RBP9.08□□□□□ -0.96
NUDCD1-204ENST00000521439 STAG1Q8WVM7 1258 aa9.08□□□□□ -0.96
NUDCD1-204ENST00000521439 PPP1R16BQ96T49 567 aa9.08□□□□□ -0.96
NUDCD1-204ENST00000521439 OXSMQ9NWU1 459 aa9.08□□□□□ -0.96
NUDCD1-204ENST00000521439 TCRBV5S2A0A599 114 aa9.07□□□□□ -0.96
NUDCD1-204ENST00000521439 SCDO00767 359 aa9.07□□□□□ -0.96
NUDCD1-204ENST00000521439 HIP1RO75146 1068 aa9.07□□□□□ -0.96
NUDCD1-204ENST00000521439 PDE6BP35913 854 aa9.07□□□□□ -0.96
NUDCD1-204ENST00000521439 MAPKAPK2P49137 400 aa9.07□□□□□ -0.96
NUDCD1-204ENST00000521439 TMEM62Q0P6H9 643 aa9.07□□□□□ -0.96
NUDCD1-204ENST00000521439 TUSC3Q13454 348 aa9.07□□□□□ -0.96
NUDCD1-204ENST00000521439 SLC9A5Q14940 896 aa9.07□□□□□ -0.96
NUDCD1-204ENST00000521439 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.07□□□□□ -0.96
NUDCD1-204ENST00000521439 C11orf74Q86VG3 221 aa9.07□□□□□ -0.96
NUDCD1-204ENST00000521439 PDGFDQ9GZP0 370 aaPredicted RBP9.07□□□□□ -0.96
NUDCD1-204ENST00000521439 SPTLC3Q9NUV7 552 aa9.07□□□□□ -0.96
NUDCD1-204ENST00000521439 KLHL14Q9P2G3 628 aa9.07□□□□□ -0.96
NUDCD1-204ENST00000521439 TELO2Q9Y4R8 837 aa9.07□□□□□ -0.96
NUDCD1-204ENST00000521439 RAB11FIP3O75154 756 aa9.06□□□□□ -0.96
NUDCD1-204ENST00000521439 LTFP02788 710 aa9.06□□□□□ -0.96
NUDCD1-204ENST00000521439 GUCY2FP51841 1108 aa9.06□□□□□ -0.96
NUDCD1-204ENST00000521439 PRR5P85299 388 aa9.06□□□□□ -0.96
NUDCD1-204ENST00000521439 TMPRSS15P98073 1019 aa9.06□□□□□ -0.96
NUDCD1-204ENST00000521439 ZNF174Q15697 407 aa9.06□□□□□ -0.96
NUDCD1-204ENST00000521439 ATP13A4Q4VNC1 1196 aa9.06□□□□□ -0.96
NUDCD1-204ENST00000521439 CPZQ66K79 652 aa9.06□□□□□ -0.96
NUDCD1-204ENST00000521439 FSTL4Q6MZW2 842 aa9.06□□□□□ -0.96
NUDCD1-204ENST00000521439 NECAB2Q7Z6G3 386 aa9.06□□□□□ -0.96
NUDCD1-204ENST00000521439 FERMT3Q86UX7 667 aa9.06□□□□□ -0.96
NUDCD1-204ENST00000521439 SPATS2Q86XZ4 545 aaKnown RBP9.06□□□□□ -0.96
NUDCD1-204ENST00000521439 EFHBQ8N7U6 833 aa9.06□□□□□ -0.96
NUDCD1-204ENST00000521439 CLEC4DQ8WXI8 215 aa9.06□□□□□ -0.96
NUDCD1-204ENST00000521439 TSPAN17Q96FV3 270 aa9.06□□□□□ -0.96
NUDCD1-204ENST00000521439 SCYL1Q96KG9 808 aa9.06□□□□□ -0.96
NUDCD1-204ENST00000521439 EMC7Q9NPA0 242 aa9.06□□□□□ -0.96
NUDCD1-204ENST00000521439 SLC5A4Q9NY91 659 aa9.06□□□□□ -0.96
NUDCD1-204ENST00000521439 H2AFY2Q9P0M6 372 aaPredicted RBP9.06□□□□□ -0.96
NUDCD1-204ENST00000521439 B3GALT1Q9Y5Z6 326 aa9.06□□□□□ -0.96
NUDCD1-204ENST00000521439 PDGFRBP09619 1106 aa9.05□□□□□ -0.96
NUDCD1-204ENST00000521439 GJA4P35212 333 aa9.05□□□□□ -0.96
NUDCD1-204ENST00000521439 FAM50AQ14320 339 aaKnown RBP9.05□□□□□ -0.96
NUDCD1-204ENST00000521439 DLG3Q92796 817 aa9.05□□□□□ -0.96
NUDCD1-204ENST00000521439 SPO11Q9Y5K1 396 aa9.05□□□□□ -0.96
NUDCD1-204ENST00000521439 HCFC2Q9Y5Z7 792 aa9.05□□□□□ -0.96
NUDCD1-204ENST00000521439 ABLIM1O14639 778 aa9.04□□□□□ -0.96
NUDCD1-204ENST00000521439 DVL2O14641 736 aa9.04□□□□□ -0.96
NUDCD1-204ENST00000521439 PTPN1P18031 435 aaKnown RBP9.04□□□□□ -0.96
NUDCD1-204ENST00000521439 YBX1P67809 324 aaKnown RBP9.04□□□□□ -0.96
NUDCD1-204ENST00000521439 PLEKHN1Q494U1 663 aaPredicted RBP9.04□□□□□ -0.96
NUDCD1-204ENST00000521439 BTBD8Q5XKL5 378 aa9.04□□□□□ -0.96
NUDCD1-204ENST00000521439 ZC3H14Q6PJT7 736 aaKnown RBP9.04□□□□□ -0.96
NUDCD1-204ENST00000521439 SYDE1Q6ZW31 735 aaPredicted RBP9.04□□□□□ -0.96
NUDCD1-204ENST00000521439 PASD1Q8IV76 773 aa9.04□□□□□ -0.96
NUDCD1-204ENST00000521439 KIAA1958Q8N8K9 716 aa9.04□□□□□ -0.96
NUDCD1-204ENST00000521439 ARRDC4Q8NCT1 418 aa9.04□□□□□ -0.96
NUDCD1-204ENST00000521439 PCIF1Q9H4Z3 704 aa9.04□□□□□ -0.96
NUDCD1-204ENST00000521439 KCNH7Q9NS40 1196 aa9.04□□□□□ -0.96
NUDCD1-204ENST00000521439 WASHC2CQ9Y4E1 1318 aa9.04□□□□□ -0.96
NUDCD1-204ENST00000521439 FAM90A27PA6NNH2 459 aa9.03□□□□□ -0.96
NUDCD1-204ENST00000521439 SLC9A1P19634 815 aa9.03□□□□□ -0.96
NUDCD1-204ENST00000521439 KIF11P52732 1056 aa9.03□□□□□ -0.96
NUDCD1-204ENST00000521439 EXOSC10Q01780 885 aaKnown RBP9.03□□□□□ -0.96
NUDCD1-204ENST00000521439 SEC23AQ15436 765 aa9.03□□□□□ -0.96
NUDCD1-204ENST00000521439 ZNF124Q15973 351 aa9.03□□□□□ -0.96
NUDCD1-204ENST00000521439 BRDTQ58F21 947 aaPredicted RBP9.03□□□□□ -0.96
NUDCD1-204ENST00000521439 TTLL11Q8NHH1 800 aa9.03□□□□□ -0.96
NUDCD1-204ENST00000521439 ACSS2Q9NR19 701 aa9.03□□□□□ -0.96
NUDCD1-204ENST00000521439 RIC8BQ9NVN3 520 aa9.03□□□□□ -0.96
NUDCD1-204ENST00000521439 HRKO00198 91 aa9.02□□□□□ -0.97
NUDCD1-204ENST00000521439 TGM5O43548 720 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms