RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 SLC6A20Q9NP91 592 aa4.66□□□□□ -1.66
HMGN1P28-201ENST00000521340 TOPORSQ9NS56 1045 aaPredicted RBP4.66□□□□□ -1.66
HMGN1P28-201ENST00000521340 CATSPERZQ9NTU4 200 aa4.66□□□□□ -1.66
HMGN1P28-201ENST00000521340 C19orf73Q9NVV2 129 aa4.66□□□□□ -1.66
HMGN1P28-201ENST00000521340 TCEAL9Q9UHQ7 104 aa4.66□□□□□ -1.66
HMGN1P28-201ENST00000521340 ACSL6Q9UKU0 697 aa4.66□□□□□ -1.66
HMGN1P28-201ENST00000521340 ZKSCAN5Q9Y2L8 839 aa4.66□□□□□ -1.66
HMGN1P28-201ENST00000521340 E2F8A0AVK6 867 aa4.65□□□□□ -1.67
HMGN1P28-201ENST00000521340 LCHNA4D1U4 455 aa4.65□□□□□ -1.67
HMGN1P28-201ENST00000521340 C22orf46C9J442 243 aa4.65□□□□□ -1.67
HMGN1P28-201ENST00000521340 KCNK3O14649 394 aa4.65□□□□□ -1.67
HMGN1P28-201ENST00000521340 KIF3BO15066 747 aa4.65□□□□□ -1.67
HMGN1P28-201ENST00000521340 CLASP2O75122 1294 aaKnown RBP4.65□□□□□ -1.67
HMGN1P28-201ENST00000521340 ULK1O75385 1050 aa4.65□□□□□ -1.67
HMGN1P28-201ENST00000521340 ZRANB2O95218 330 aaKnown RBP eCLIP4.65□□□□□ -1.67
HMGN1P28-201ENST00000521340 SLC9A1P19634 815 aa4.65□□□□□ -1.67
HMGN1P28-201ENST00000521340 FUT4P22083 530 aa4.65□□□□□ -1.67
HMGN1P28-201ENST00000521340 PTX3P26022 381 aaPredicted RBP4.65□□□□□ -1.67
HMGN1P28-201ENST00000521340 KIR2DL1P43626 348 aaPredicted RBP4.65□□□□□ -1.67
HMGN1P28-201ENST00000521340 KIR2DL2P43627 348 aaPredicted RBP4.65□□□□□ -1.67
HMGN1P28-201ENST00000521340 ABCB5Q2M3G0 1257 aa4.65□□□□□ -1.67
HMGN1P28-201ENST00000521340 HSF5Q4G112 596 aaPredicted RBP4.65□□□□□ -1.67
HMGN1P28-201ENST00000521340 TMEM240Q5SV17 173 aa4.65□□□□□ -1.67
HMGN1P28-201ENST00000521340 STK11IPQ8N1F8 1099 aa4.65□□□□□ -1.67
HMGN1P28-201ENST00000521340 CPA6Q8N4T0 437 aa4.65□□□□□ -1.67
HMGN1P28-201ENST00000521340 MAGEB6Q8N7X4 407 aa4.65□□□□□ -1.67
HMGN1P28-201ENST00000521340 ZNF610Q8N9Z0 462 aa4.65□□□□□ -1.67
HMGN1P28-201ENST00000521340 PIP4K2CQ8TBX8 421 aa4.65□□□□□ -1.67
HMGN1P28-201ENST00000521340 ASB11Q8WXH4 323 aa4.65□□□□□ -1.67
HMGN1P28-201ENST00000521340 ZNF496Q96IT1 587 aaPredicted RBP4.65□□□□□ -1.67
HMGN1P28-201ENST00000521340 HRASLS5Q96KN8 279 aa4.65□□□□□ -1.67
HMGN1P28-201ENST00000521340 KRTAP4-7Q9BYR0 210 aa4.65□□□□□ -1.67
HMGN1P28-201ENST00000521340 MBNL3Q9NUK0 354 aaKnown RBP4.65□□□□□ -1.67
HMGN1P28-201ENST00000521340 C14orf119Q9NWQ9 140 aa4.65□□□□□ -1.67
HMGN1P28-201ENST00000521340 ADAMTS6Q9UKP5 1117 aa4.65□□□□□ -1.67
HMGN1P28-201ENST00000521340 SRPK3Q9UPE1 567 aa4.65□□□□□ -1.67
HMGN1P28-201ENST00000521340 SLC12A8A0AV02 714 aa4.64□□□□□ -1.67
HMGN1P28-201ENST00000521340 RASSF10A6NK89 507 aa4.64□□□□□ -1.67
HMGN1P28-201ENST00000521340 FAM90A27PA6NNH2 459 aa4.64□□□□□ -1.67
HMGN1P28-201ENST00000521340 PRC1O43663 620 aa4.64□□□□□ -1.67
HMGN1P28-201ENST00000521340 MYO1BO43795 1136 aa4.64□□□□□ -1.67
HMGN1P28-201ENST00000521340 C4BPAP04003 597 aaKnown RBP4.64□□□□□ -1.67
HMGN1P28-201ENST00000521340 RNASE1P07998 156 aaKnown RBP4.64□□□□□ -1.67
HMGN1P28-201ENST00000521340 ZSCAN20P17040 1043 aaPredicted RBP4.64□□□□□ -1.67
HMGN1P28-201ENST00000521340 ST5P78524 1137 aa4.64□□□□□ -1.67
HMGN1P28-201ENST00000521340 IRF9Q00978 393 aa4.64□□□□□ -1.67
HMGN1P28-201ENST00000521340 OCRLQ01968 901 aa4.64□□□□□ -1.67
HMGN1P28-201ENST00000521340 FAPQ12884 760 aa4.64□□□□□ -1.67
HMGN1P28-201ENST00000521340 CATSPEREQ5SY80 951 aa4.64□□□□□ -1.67
HMGN1P28-201ENST00000521340 IQSEC1Q6DN90 963 aa4.64□□□□□ -1.67
HMGN1P28-201ENST00000521340 CMTR2Q8IYT2 770 aaKnown RBP4.64□□□□□ -1.67
HMGN1P28-201ENST00000521340 MYO1HQ8N1T3 1032 aa4.64□□□□□ -1.67
HMGN1P28-201ENST00000521340 KIAA1958Q8N8K9 716 aa4.64□□□□□ -1.67
HMGN1P28-201ENST00000521340 JPH3Q8WXH2 748 aaPredicted RBP4.64□□□□□ -1.67
HMGN1P28-201ENST00000521340 CLEC4DQ8WXI8 215 aa4.64□□□□□ -1.67
HMGN1P28-201ENST00000521340 MISP3Q96FF7 219 aa4.64□□□□□ -1.67
HMGN1P28-201ENST00000521340 AHCYL2Q96HN2 611 aaKnown RBP4.64□□□□□ -1.67
HMGN1P28-201ENST00000521340 ZDHHC5Q9C0B5 715 aa4.64□□□□□ -1.67
HMGN1P28-201ENST00000521340 SEMA4AQ9H3S1 761 aa4.64□□□□□ -1.67
HMGN1P28-201ENST00000521340 EPB41L1Q9H4G0 881 aa4.64□□□□□ -1.67
HMGN1P28-201ENST00000521340 RC3H2Q9HBD1 1191 aaKnown RBP4.64□□□□□ -1.67
HMGN1P28-201ENST00000521340 CHST12Q9NRB3 414 aa4.64□□□□□ -1.67
HMGN1P28-201ENST00000521340 MARCH2Q9P0N8 246 aa4.64□□□□□ -1.67
HMGN1P28-201ENST00000521340 SSU72P8A0A1W2PR75 194 aa4.63□□□□□ -1.67
HMGN1P28-201ENST00000521340 ACOT7O00154 380 aa4.63□□□□□ -1.67
HMGN1P28-201ENST00000521340 NRDCO43847 1150 aa4.63□□□□□ -1.67
HMGN1P28-201ENST00000521340 H2AFYO75367 372 aaKnown RBP4.63□□□□□ -1.67
HMGN1P28-201ENST00000521340 FUCA1P04066 466 aa4.63□□□□□ -1.67
HMGN1P28-201ENST00000521340 GLI4P10075 376 aa4.63□□□□□ -1.67
HMGN1P28-201ENST00000521340 GALEQ14376 348 aa4.63□□□□□ -1.67
HMGN1P28-201ENST00000521340 NR0B2Q15466 257 aa4.63□□□□□ -1.67
HMGN1P28-201ENST00000521340 DDB1Q16531 1140 aa4.63□□□□□ -1.67
HMGN1P28-201ENST00000521340 PTPN21Q16825 1174 aa4.63□□□□□ -1.67
HMGN1P28-201ENST00000521340 FIGNQ5HY92 759 aa4.63□□□□□ -1.67
HMGN1P28-201ENST00000521340 ZNF648Q5T619 568 aaPredicted RBP4.63□□□□□ -1.67
HMGN1P28-201ENST00000521340 MROH9Q5TGP6 573 aa4.63□□□□□ -1.67
HMGN1P28-201ENST00000521340 CC2D1AQ6P1N0 951 aaPredicted RBP4.63□□□□□ -1.67
HMGN1P28-201ENST00000521340 EPM2AIP1Q7L775 607 aaPredicted RBP4.63□□□□□ -1.67
HMGN1P28-201ENST00000521340 ZBTB46Q86UZ6 589 aa4.63□□□□□ -1.67
HMGN1P28-201ENST00000521340 LYSMD2Q8IV50 215 aa4.63□□□□□ -1.67
HMGN1P28-201ENST00000521340 NAT16Q8N8M0 369 aa4.63□□□□□ -1.67
HMGN1P28-201ENST00000521340 FOXRED1Q96CU9 486 aaPredicted RBP4.63□□□□□ -1.67
HMGN1P28-201ENST00000521340 TRMT2BQ96GJ1 504 aaKnown RBP4.63□□□□□ -1.67
HMGN1P28-201ENST00000521340 CD244Q9BZW8 370 aa4.63□□□□□ -1.67
HMGN1P28-201ENST00000521340 CARS2Q9HA77 564 aaKnown RBP4.63□□□□□ -1.67
HMGN1P28-201ENST00000521340 ARNT2Q9HBZ2 717 aa4.63□□□□□ -1.67
HMGN1P28-201ENST00000521340 AASDHPPTQ9NRN7 309 aa4.63□□□□□ -1.67
HMGN1P28-201ENST00000521340 ZNF180Q9UJW8 692 aa4.63□□□□□ -1.67
HMGN1P28-201ENST00000521340 RWDD3Q9Y3V2 267 aa4.63□□□□□ -1.67
HMGN1P28-201ENST00000521340 USP2O75604 605 aaPredicted RBP4.62□□□□□ -1.67
HMGN1P28-201ENST00000521340 LTFP02788 710 aa4.62□□□□□ -1.67
HMGN1P28-201ENST00000521340 GNAT1P11488 350 aa4.62□□□□□ -1.67
HMGN1P28-201ENST00000521340 LPOP22079 712 aaPredicted RBP4.62□□□□□ -1.67
HMGN1P28-201ENST00000521340 SDHAP31040 664 aa4.62□□□□□ -1.67
HMGN1P28-201ENST00000521340 SLC6A11P48066 632 aa4.62□□□□□ -1.67
HMGN1P28-201ENST00000521340 RTP1P59025 263 aa4.62□□□□□ -1.67
HMGN1P28-201ENST00000521340 HTRA3P83110 453 aa4.62□□□□□ -1.67
HMGN1P28-201ENST00000521340 SPIRE1Q08AE8 756 aa4.62□□□□□ -1.67
HMGN1P28-201ENST00000521340 SART3Q15020 963 aaKnown RBP4.62□□□□□ -1.67
HMGN1P28-201ENST00000521340 TIGD5Q53EQ6 642 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms