RNA–Protein interactions for RNA: ENST00000520857.5

TRAPPC9-208, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-208ENST00000520857 SCTRP47872 440 aa14.01□□□□□ -0.17
TRAPPC9-208ENST00000520857 ZNF844Q08AG5 666 aa14.01□□□□□ -0.17
TRAPPC9-208ENST00000520857 DGKHQ86XP1 1220 aa14.01□□□□□ -0.17
TRAPPC9-208ENST00000520857 NSUN4Q96CB9 384 aaKnown RBP14.01□□□□□ -0.17
TRAPPC9-208ENST00000520857 PSMD1Q99460 953 aa14.01□□□□□ -0.17
TRAPPC9-208ENST00000520857 PLCD4Q9BRC7 762 aa14.01□□□□□ -0.17
TRAPPC9-208ENST00000520857 TRIM51Q9BSJ1 452 aa14.01□□□□□ -0.17
TRAPPC9-208ENST00000520857 RIC8AQ9NPQ8 531 aa14.01□□□□□ -0.17
TRAPPC9-208ENST00000520857 MYO5AQ9Y4I1 1855 aaKnown RBP14.01□□□□□ -0.17
TRAPPC9-208ENST00000520857 MYH6P13533 1939 aa14.01□□□□□ -0.17
TRAPPC9-208ENST00000520857 RGS16O15492 202 aaPredicted RBP14.01□□□□□ -0.17
TRAPPC9-208ENST00000520857 ADAMTS2O95450 1211 aa14.01□□□□□ -0.17
TRAPPC9-208ENST00000520857 H2AFZP0C0S5 128 aa14.01□□□□□ -0.17
TRAPPC9-208ENST00000520857 ITGA4P13612 1032 aa14.01□□□□□ -0.17
TRAPPC9-208ENST00000520857 KLRK1P26718 216 aa14.01□□□□□ -0.17
TRAPPC9-208ENST00000520857 HNRNPH3P31942 346 aaKnown RBP14.01□□□□□ -0.17
TRAPPC9-208ENST00000520857 UBE4AQ14139 1066 aa14.01□□□□□ -0.17
TRAPPC9-208ENST00000520857 DIXDC1Q155Q3 683 aa14.01□□□□□ -0.17
TRAPPC9-208ENST00000520857 PARP10Q53GL7 1025 aa14.01□□□□□ -0.17
TRAPPC9-208ENST00000520857 RCSD1Q6JBY9 416 aa14.01□□□□□ -0.17
TRAPPC9-208ENST00000520857 H2AFVQ71UI9 128 aa14.01□□□□□ -0.17
TRAPPC9-208ENST00000520857 PLCB1Q9NQ66 1216 aa14.01□□□□□ -0.17
TRAPPC9-208ENST00000520857 ANKIB1Q9P2G1 1089 aa14.01□□□□□ -0.17
TRAPPC9-208ENST00000520857 SPDYE3A6NKU9 549 aa14.01□□□□□ -0.17
TRAPPC9-208ENST00000520857 PJA2O43164 708 aa14.01□□□□□ -0.17
TRAPPC9-208ENST00000520857 CYTH3O43739 400 aa14.01□□□□□ -0.17
TRAPPC9-208ENST00000520857 FGGP02679 453 aa14.01□□□□□ -0.17
TRAPPC9-208ENST00000520857 MMEP08473 750 aa14.01□□□□□ -0.17
TRAPPC9-208ENST00000520857 COPB2P35606 906 aa14.01□□□□□ -0.17
TRAPPC9-208ENST00000520857 HSPA9P38646 679 aaKnown RBP14.01□□□□□ -0.17
TRAPPC9-208ENST00000520857 NKX1-1Q15270 411 aaPredicted RBP14.01□□□□□ -0.17
TRAPPC9-208ENST00000520857 LLGL1Q15334 1064 aa14.01□□□□□ -0.17
TRAPPC9-208ENST00000520857 MEI1Q5TIA1 1274 aa14.01□□□□□ -0.17
TRAPPC9-208ENST00000520857 HOOK3Q86VS8 718 aa14.01□□□□□ -0.17
TRAPPC9-208ENST00000520857 FMO2Q99518 471 aa14.01□□□□□ -0.17
TRAPPC9-208ENST00000520857 STK17AQ9UEE5 414 aa14.01□□□□□ -0.17
TRAPPC9-208ENST00000520857 DNM1LO00429 736 aa14□□□□□ -0.17
TRAPPC9-208ENST00000520857 NR2F2P24468 414 aa14□□□□□ -0.17
TRAPPC9-208ENST00000520857 GRB10Q13322 594 aa14□□□□□ -0.17
TRAPPC9-208ENST00000520857 GRM4Q14833 912 aa14□□□□□ -0.17
TRAPPC9-208ENST00000520857 DENND2CQ68D51 928 aa14□□□□□ -0.17
TRAPPC9-208ENST00000520857 GPBP1Q86WP2 473 aa14□□□□□ -0.17
TRAPPC9-208ENST00000520857 PBKQ96KB5 322 aa14□□□□□ -0.17
TRAPPC9-208ENST00000520857 OSBPL7Q9BZF2 842 aa14□□□□□ -0.17
TRAPPC9-208ENST00000520857 INTS9Q9NV88 658 aaKnown RBP14□□□□□ -0.17
TRAPPC9-208ENST00000520857 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14□□□□□ -0.172e-6■■■■■ 37.3
TRAPPC9-208ENST00000520857 PVALEFA0A1B0GWK0 134 aa14□□□□□ -0.17
TRAPPC9-208ENST00000520857 DCDC2CA8MYV0 355 aa14□□□□□ -0.17
TRAPPC9-208ENST00000520857 FLT3P36888 993 aa14□□□□□ -0.17
TRAPPC9-208ENST00000520857 COASYQ13057 564 aa14□□□□□ -0.17
TRAPPC9-208ENST00000520857 ANKRD20A8PQ5CZ79 823 aa14□□□□□ -0.17
TRAPPC9-208ENST00000520857 YTHDF3Q7Z739 585 aaKnown RBP14□□□□□ -0.17
TRAPPC9-208ENST00000520857 PIK3R5Q8WYR1 880 aa14□□□□□ -0.17
TRAPPC9-208ENST00000520857 INPP4AQ96PE3 977 aaPredicted RBP14□□□□□ -0.17
TRAPPC9-208ENST00000520857 CCDC87Q9NVE4 849 aa14□□□□□ -0.17
TRAPPC9-208ENST00000520857 KIAA1024Q9UPX6 916 aa14□□□□□ -0.17
TRAPPC9-208ENST00000520857 SKAP2O75563 359 aaPredicted RBP14□□□□□ -0.17
TRAPPC9-208ENST00000520857 BAG3O95817 575 aa14□□□□□ -0.17
TRAPPC9-208ENST00000520857 LDHBP07195 334 aaKnown RBP14□□□□□ -0.17
TRAPPC9-208ENST00000520857 TNFRSF8P28908 595 aa14□□□□□ -0.17
TRAPPC9-208ENST00000520857 PTK2Q05397 1052 aa14□□□□□ -0.17
TRAPPC9-208ENST00000520857 KCNMA1Q12791 1236 aa14□□□□□ -0.17
TRAPPC9-208ENST00000520857 KCNH2Q12809 1159 aa14□□□□□ -0.17
TRAPPC9-208ENST00000520857 DRP2Q13474 957 aa14□□□□□ -0.17
TRAPPC9-208ENST00000520857 METTL13Q8N6R0 699 aa14□□□□□ -0.17
TRAPPC9-208ENST00000520857 MICAL1Q8TDZ2 1067 aa14□□□□□ -0.17
TRAPPC9-208ENST00000520857 CHMP6Q96FZ7 201 aa14□□□□□ -0.17
TRAPPC9-208ENST00000520857 SLC4A9Q96Q91 983 aa14□□□□□ -0.17
TRAPPC9-208ENST00000520857 BTG4Q9NY30 223 aa14□□□□□ -0.17
TRAPPC9-208ENST00000520857 MAD2L2Q9UI95 211 aa14□□□□□ -0.17
TRAPPC9-208ENST00000520857 ZNF652Q9Y2D9 606 aa14□□□□□ -0.17
TRAPPC9-208ENST00000520857 EIF4E1BA6NMX2 242 aaKnown RBP13.99□□□□□ -0.17
TRAPPC9-208ENST00000520857 CLGNO14967 610 aa13.99□□□□□ -0.17
TRAPPC9-208ENST00000520857 TLR2O60603 784 aa13.99□□□□□ -0.17
TRAPPC9-208ENST00000520857 EYA3Q99504 573 aa13.99□□□□□ -0.17
TRAPPC9-208ENST00000520857 NUDT12Q9BQG2 462 aa13.99□□□□□ -0.17
TRAPPC9-208ENST00000520857 ZNF287Q9HBT7 754 aa13.99□□□□□ -0.17
TRAPPC9-208ENST00000520857 ARMCX3Q9UH62 379 aaPredicted RBP13.99□□□□□ -0.17
TRAPPC9-208ENST00000520857 AMFRQ9UKV5 643 aa13.99□□□□□ -0.17
TRAPPC9-208ENST00000520857 SNX24Q9Y343 169 aa13.99□□□□□ -0.17
TRAPPC9-208ENST00000520857 PCDHB13Q9Y5F0 798 aa13.99□□□□□ -0.17
TRAPPC9-208ENST00000520857 MYH7P12883 1935 aa13.99□□□□□ -0.17
TRAPPC9-208ENST00000520857 NPHP3-ACAD11A0A0J9YXS1 232 aa13.99□□□□□ -0.17
TRAPPC9-208ENST00000520857 TRAPPC3O43617 180 aa13.99□□□□□ -0.17
TRAPPC9-208ENST00000520857 KIF1CO43896 1103 aaKnown RBP13.99□□□□□ -0.17
TRAPPC9-208ENST00000520857 ADCY7P51828 1080 aa13.99□□□□□ -0.17
TRAPPC9-208ENST00000520857 DDR1Q08345 913 aa13.99□□□□□ -0.17
TRAPPC9-208ENST00000520857 ZNF211Q13398 564 aaPredicted RBP13.99□□□□□ -0.17
TRAPPC9-208ENST00000520857 UBE2SQ16763 222 aa13.99□□□□□ -0.17
TRAPPC9-208ENST00000520857 EXOC3L4Q17RC7 722 aa13.99□□□□□ -0.17
TRAPPC9-208ENST00000520857 PREPLQ4J6C6 727 aaPredicted RBP13.99□□□□□ -0.17
TRAPPC9-208ENST00000520857 HGSNATQ68CP4 663 aa13.99□□□□□ -0.17
TRAPPC9-208ENST00000520857 RAD54LQ92698 747 aa13.99□□□□□ -0.17
TRAPPC9-208ENST00000520857 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.99□□□□□ -0.177e-6■■□□□ 12.2
TRAPPC9-208ENST00000520857 KCNK9Q9NPC2 374 aa13.99□□□□□ -0.17
TRAPPC9-208ENST00000520857 IL17RBQ9NRM6 502 aa13.99□□□□□ -0.17
TRAPPC9-208ENST00000520857 E9PMD0 336 aa13.99□□□□□ -0.17
TRAPPC9-208ENST00000520857 SLC9A1P19634 815 aa13.99□□□□□ -0.17
TRAPPC9-208ENST00000520857 LRIG3Q6UXM1 1119 aa13.99□□□□□ -0.17
TRAPPC9-208ENST00000520857 CELF1Q92879 486 aaKnown RBP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms