RNA–Protein interactions for RNA: ENST00000519774.5

HPS4-218, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-218ENST00000519774 FXR2P51116 673 aaKnown RBP eCLIP13.41□□□□□ -0.26
HPS4-218ENST00000519774 ACTR2P61160 394 aa13.41□□□□□ -0.26
HPS4-218ENST00000519774 MFSD10Q14728 455 aa13.41□□□□□ -0.26
HPS4-218ENST00000519774 NBPF20Q3BBV1 942 aa13.41□□□□□ -0.26
HPS4-218ENST00000519774 LRCH2Q5VUJ6 765 aa13.41□□□□□ -0.26
HPS4-218ENST00000519774 NOSTRINQ8IVI9 506 aa13.41□□□□□ -0.26
HPS4-218ENST00000519774 SPRYD3Q8NCJ5 442 aa13.41□□□□□ -0.26
HPS4-218ENST00000519774 SEPT1Q8WYJ6 367 aa13.41□□□□□ -0.26
HPS4-218ENST00000519774 KAT2BQ92831 832 aa13.41□□□□□ -0.26
HPS4-218ENST00000519774 INTS4Q96HW7 963 aaKnown RBP13.41□□□□□ -0.26
HPS4-218ENST00000519774 MBOAT7Q96N66 472 aa13.41□□□□□ -0.26
HPS4-218ENST00000519774 NAP1L4Q99733 375 aaKnown RBP13.41□□□□□ -0.26
HPS4-218ENST00000519774 KATNAL1Q9BW62 490 aa13.41□□□□□ -0.26
HPS4-218ENST00000519774 TEKT3Q9BXF9 490 aa13.41□□□□□ -0.26
HPS4-218ENST00000519774 PRDM5Q9NQX1 630 aaPredicted RBP13.41□□□□□ -0.26
HPS4-218ENST00000519774 TBC1D22BQ9NU19 505 aa13.41□□□□□ -0.26
HPS4-218ENST00000519774 ZMYND8Q9ULU4 1186 aaPredicted RBP13.41□□□□□ -0.26
HPS4-218ENST00000519774 NR2E3Q9Y5X4 410 aa13.41□□□□□ -0.26
HPS4-218ENST00000519774 MROH7Q68CQ1 1323 aa13.4□□□□□ -0.26
HPS4-218ENST00000519774 DCDC2CA8MYV0 355 aa13.4□□□□□ -0.26
HPS4-218ENST00000519774 TLR3O15455 904 aaKnown RBP13.4□□□□□ -0.26
HPS4-218ENST00000519774 DHX15O43143 795 aaKnown RBP13.4□□□□□ -0.26
HPS4-218ENST00000519774 CHMP2AO43633 222 aa13.4□□□□□ -0.26
HPS4-218ENST00000519774 MARCH6O60337 910 aa13.4□□□□□ -0.26
HPS4-218ENST00000519774 CCNE2O96020 404 aa13.4□□□□□ -0.26
HPS4-218ENST00000519774 SYN1P17600 705 aa13.4□□□□□ -0.26
HPS4-218ENST00000519774 PDCP20941 246 aa13.4□□□□□ -0.26
HPS4-218ENST00000519774 KIAA0753Q2KHM9 967 aa13.4□□□□□ -0.26
HPS4-218ENST00000519774 C1orf53Q5VUE5 145 aa13.4□□□□□ -0.26
HPS4-218ENST00000519774 PPP4R3AQ6IN85 833 aa13.4□□□□□ -0.26
HPS4-218ENST00000519774 GLG1Q92896 1179 aa13.4□□□□□ -0.26
HPS4-218ENST00000519774 SLC5A5Q92911 643 aa13.4□□□□□ -0.26
HPS4-218ENST00000519774 C16orf70Q9BSU1 422 aa13.4□□□□□ -0.26
HPS4-218ENST00000519774 PCDH10Q9P2E7 1040 aa13.4□□□□□ -0.26
HPS4-218ENST00000519774 ZNF215Q9UL58 517 aaPredicted RBP13.4□□□□□ -0.26
HPS4-218ENST00000519774 NOL7Q9UMY1 257 aaKnown RBP13.4□□□□□ -0.26
HPS4-218ENST00000519774 TNRC18O15417 2968 aaPredicted RBP13.39□□□□□ -0.27
HPS4-218ENST00000519774 H3BRB1 525 aa13.39□□□□□ -0.27
HPS4-218ENST00000519774 BACH1O14867 736 aa13.39□□□□□ -0.27
HPS4-218ENST00000519774 CLTBP09497 229 aa13.39□□□□□ -0.27
HPS4-218ENST00000519774 U2AF2P26368 475 aaKnown RBP eCLIP13.39□□□□□ -0.27
HPS4-218ENST00000519774 MARK3P27448 753 aa13.39□□□□□ -0.27
HPS4-218ENST00000519774 MCM7P33993 719 aa13.39□□□□□ -0.27
HPS4-218ENST00000519774 CDK7P50613 346 aa13.39□□□□□ -0.27
HPS4-218ENST00000519774 KRT76Q01546 638 aa13.39□□□□□ -0.27
HPS4-218ENST00000519774 ZNF746Q6NUN9 644 aaPredicted RBP13.39□□□□□ -0.27
HPS4-218ENST00000519774 FAM126BQ8IXS8 530 aa13.39□□□□□ -0.27
HPS4-218ENST00000519774 PIP4P2Q8N4L2 257 aa13.39□□□□□ -0.27
HPS4-218ENST00000519774 SLC43A3Q8NBI5 491 aa13.39□□□□□ -0.27
HPS4-218ENST00000519774 ETNPPLQ8TBG4 499 aa13.39□□□□□ -0.27
HPS4-218ENST00000519774 RIT2Q99578 217 aa13.39□□□□□ -0.27
HPS4-218ENST00000519774 TRPV6Q9H1D0 765 aa13.39□□□□□ -0.27
HPS4-218ENST00000519774 TUT1Q9H6E5 874 aaKnown RBP13.39□□□□□ -0.27
HPS4-218ENST00000519774 AZI2Q9H6S1 392 aa13.39□□□□□ -0.27
HPS4-218ENST00000519774 PDLIM7Q9NR12 457 aa13.39□□□□□ -0.27
HPS4-218ENST00000519774 TRMT13Q9NUP7 481 aaKnown RBP13.39□□□□□ -0.27
HPS4-218ENST00000519774 SAMM50Q9Y512 469 aa13.39□□□□□ -0.27
HPS4-218ENST00000519774 EMSYQ7Z589 1322 aa13.39□□□□□ -0.27
HPS4-218ENST00000519774 MKI67P46013 3256 aaKnown RBP13.38□□□□□ -0.27
HPS4-218ENST00000519774 H0YGN5 161 aa13.38□□□□□ -0.27
HPS4-218ENST00000519774 HAS3O00219 553 aa13.38□□□□□ -0.27
HPS4-218ENST00000519774 B4GALT4O60513 344 aa13.38□□□□□ -0.27
HPS4-218ENST00000519774 NEMFO60524 1076 aa13.38□□□□□ -0.27
HPS4-218ENST00000519774 SUPT20HL2P0C7V6 817 aa13.38□□□□□ -0.27
HPS4-218ENST00000519774 NBR1Q14596 966 aa13.38□□□□□ -0.27
HPS4-218ENST00000519774 ZNF174Q15697 407 aa13.38□□□□□ -0.27
HPS4-218ENST00000519774 CALCRLQ16602 461 aa13.38□□□□□ -0.27
HPS4-218ENST00000519774 TTC38Q5R3I4 469 aa13.38□□□□□ -0.27
HPS4-218ENST00000519774 MIS18BP1Q6P0N0 1132 aa13.38□□□□□ -0.27
HPS4-218ENST00000519774 NFRKBQ6P4R8 1299 aa13.38□□□□□ -0.27
HPS4-218ENST00000519774 ANKRD33Q7Z3H0 272 aa13.38□□□□□ -0.27
HPS4-218ENST00000519774 C7orf31Q8N865 590 aa13.38□□□□□ -0.27
HPS4-218ENST00000519774 TOX2Q96NM4 488 aa13.38□□□□□ -0.27
HPS4-218ENST00000519774 PCYT2Q99447 389 aa13.38□□□□□ -0.27
HPS4-218ENST00000519774 SEZ6LQ9BYH1 1024 aa13.38□□□□□ -0.27
HPS4-218ENST00000519774 UNC45AQ9H3U1 944 aa13.38□□□□□ -0.27
HPS4-218ENST00000519774 KCNMB3Q9NPA1 279 aa13.38□□□□□ -0.27
HPS4-218ENST00000519774 HDAC6Q9UBN7 1215 aa13.38□□□□□ -0.27
HPS4-218ENST00000519774 PRKAG2Q9UGJ0 569 aa13.38□□□□□ -0.27
HPS4-218ENST00000519774 WDR64B1ANS9 1081 aa13.37□□□□□ -0.27
HPS4-218ENST00000519774 LGR5O75473 907 aa13.37□□□□□ -0.27
HPS4-218ENST00000519774 PSMD10O75832 226 aa13.37□□□□□ -0.27
HPS4-218ENST00000519774 BAG4O95429 457 aaKnown RBP13.37□□□□□ -0.27
HPS4-218ENST00000519774 SYT1P21579 422 aa13.37□□□□□ -0.27
HPS4-218ENST00000519774 FAAP100Q0VG06 881 aa13.37□□□□□ -0.27
HPS4-218ENST00000519774 FAM160B1Q5W0V3 765 aa13.37□□□□□ -0.27
HPS4-218ENST00000519774 ABHD15Q6UXT9 468 aa13.37□□□□□ -0.27
HPS4-218ENST00000519774 MIER3Q7Z3K6 550 aa13.37□□□□□ -0.27
HPS4-218ENST00000519774 SH3RF1Q7Z6J0 888 aa13.37□□□□□ -0.27
HPS4-218ENST00000519774 FERMT3Q86UX7 667 aa13.37□□□□□ -0.27
HPS4-218ENST00000519774 CCDC60Q8IWA6 550 aaPredicted RBP13.37□□□□□ -0.27
HPS4-218ENST00000519774 SMAP1Q8IYB5 467 aaPredicted RBP13.37□□□□□ -0.27
HPS4-218ENST00000519774 HAS1Q92839 578 aa13.37□□□□□ -0.27
HPS4-218ENST00000519774 SMARCAD1Q9H4L7 1026 aa13.37□□□□□ -0.27
HPS4-218ENST00000519774 DISC1Q9NRI5 854 aa13.37□□□□□ -0.27
HPS4-218ENST00000519774 TMEM39AQ9NV64 488 aa13.37□□□□□ -0.27
HPS4-218ENST00000519774 ERAP1Q9NZ08 941 aa13.37□□□□□ -0.27
HPS4-218ENST00000519774 GTF2IRD1Q9UHL9 959 aa13.37□□□□□ -0.27
HPS4-218ENST00000519774 NOD1Q9Y239 953 aa13.37□□□□□ -0.27
HPS4-218ENST00000519774 WDR81Q562E7 1941 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms