RNA–Protein interactions for RNA: ENST00000519540.5

FAM49B-214, Transcript of family with sequence similarity 49 member B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM49B, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-214ENST00000519540 PANX2Q96RD6 677 aa20.53■□□□□ 0.88
FAM49B-214ENST00000519540 TUBGCP2Q9BSJ2 902 aa20.53■□□□□ 0.88
FAM49B-214ENST00000519540 BHMT2Q9H2M3 363 aa20.53■□□□□ 0.88
FAM49B-214ENST00000519540 ZNF214Q9UL59 606 aaPredicted RBP20.53■□□□□ 0.88
FAM49B-214ENST00000519540 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.53■□□□□ 0.88
FAM49B-214ENST00000519540 STX10O60499 249 aa20.52■□□□□ 0.88
FAM49B-214ENST00000519540 MUTP22033 750 aa20.52■□□□□ 0.88
FAM49B-214ENST00000519540 EPHA7Q15375 998 aa20.52■□□□□ 0.88
FAM49B-214ENST00000519540 TKFCQ3LXA3 575 aa20.52■□□□□ 0.88
FAM49B-214ENST00000519540 NSMFQ6X4W1 530 aa20.52■□□□□ 0.88
FAM49B-214ENST00000519540 MB21D1Q8N884 522 aa20.52■□□□□ 0.88
FAM49B-214ENST00000519540 RBM46Q8TBY0 533 aaKnown RBP20.52■□□□□ 0.88
FAM49B-214ENST00000519540 CPLX3Q8WVH0 158 aa20.52■□□□□ 0.88
FAM49B-214ENST00000519540 JADE2Q9NQC1 790 aa20.52■□□□□ 0.88
FAM49B-214ENST00000519540 TBC1D7Q9P0N9 293 aa20.52■□□□□ 0.88
FAM49B-214ENST00000519540 ARHGAP6O43182 974 aa20.51■□□□□ 0.87
FAM49B-214ENST00000519540 GYPCP04921 128 aa20.51■□□□□ 0.87
FAM49B-214ENST00000519540 EIF2AK2P19525 551 aaKnown RBP20.51■□□□□ 0.87
FAM49B-214ENST00000519540 PGM5Q15124 567 aa20.51■□□□□ 0.87
FAM49B-214ENST00000519540 SNRNP48Q6IEG0 339 aaKnown RBP20.51■□□□□ 0.87
FAM49B-214ENST00000519540 FGFBP2Q9BYJ0 223 aa20.51■□□□□ 0.87
FAM49B-214ENST00000519540 ATP2A1O14983 1001 aa20.51■□□□□ 0.87
FAM49B-214ENST00000519540 TNNT1P13805 278 aa20.51■□□□□ 0.87
FAM49B-214ENST00000519540 CASP14P31944 242 aa20.51■□□□□ 0.87
FAM49B-214ENST00000519540 TMEM132BQ14DG7 1078 aa20.51■□□□□ 0.87
FAM49B-214ENST00000519540 NYAP1Q6ZVC0 841 aa20.51■□□□□ 0.87
FAM49B-214ENST00000519540 RMDN3Q96TC7 470 aa20.51■□□□□ 0.87
FAM49B-214ENST00000519540 REEP2Q9BRK0 252 aa20.51■□□□□ 0.87
FAM49B-214ENST00000519540 PXMP2Q9NR77 195 aa20.51■□□□□ 0.87
FAM49B-214ENST00000519540 HOXC10Q9NYD6 342 aa20.51■□□□□ 0.87
FAM49B-214ENST00000519540 A0A1W2PQC6 194 aa20.5■□□□□ 0.87
FAM49B-214ENST00000519540 DHX15O43143 795 aaKnown RBP20.5■□□□□ 0.87
FAM49B-214ENST00000519540 PPP1R12BO60237 982 aaPredicted RBP20.5■□□□□ 0.87
FAM49B-214ENST00000519540 MFAP3LO75121 409 aa20.5■□□□□ 0.87
FAM49B-214ENST00000519540 FGFR1OPO95684 399 aaKnown RBP20.5■□□□□ 0.87
FAM49B-214ENST00000519540 PRKCSHP14314 528 aaPredicted RBP20.5■□□□□ 0.87
FAM49B-214ENST00000519540 DNM2P50570 870 aa20.5■□□□□ 0.87
FAM49B-214ENST00000519540 BAATQ14032 418 aaPredicted RBP20.5■□□□□ 0.87
FAM49B-214ENST00000519540 ZCWPW2Q504Y3 356 aa20.5■□□□□ 0.87
FAM49B-214ENST00000519540 PIGOQ8TEQ8 1089 aa20.5■□□□□ 0.87
FAM49B-214ENST00000519540 TSG101Q99816 390 aa20.5■□□□□ 0.87
FAM49B-214ENST00000519540 PDCD2LQ9BRP1 358 aa20.5■□□□□ 0.87
FAM49B-214ENST00000519540 AGO4Q9HCK5 861 aaKnown RBP20.5■□□□□ 0.87
FAM49B-214ENST00000519540 FXR1P51114 621 aaKnown RBP eCLIP20.49■□□□□ 0.87
FAM49B-214ENST00000519540 PURBQ96QR8 312 aaKnown RBP20.49■□□□□ 0.87
FAM49B-214ENST00000519540 RUSC1Q9BVN2 902 aa20.49■□□□□ 0.87
FAM49B-214ENST00000519540 ZHX3Q9H4I2 956 aa20.49■□□□□ 0.87
FAM49B-214ENST00000519540 WDR90Q96KV7 1748 aa20.49■□□□□ 0.87
FAM49B-214ENST00000519540 MYPNQ86TC9 1320 aa20.49■□□□□ 0.87
FAM49B-214ENST00000519540 B4DLN1 442 aa20.49■□□□□ 0.87
FAM49B-214ENST00000519540 TPM2P07951 284 aa20.49■□□□□ 0.87
FAM49B-214ENST00000519540 MTIF2P46199 727 aaKnown RBP20.49■□□□□ 0.87
FAM49B-214ENST00000519540 MTMR1Q13613 665 aa20.49■□□□□ 0.87
FAM49B-214ENST00000519540 TRIM14Q14142 442 aa20.49■□□□□ 0.87
FAM49B-214ENST00000519540 PTPN14Q15678 1187 aa20.49■□□□□ 0.87
FAM49B-214ENST00000519540 RINT1Q6NUQ1 792 aa20.49■□□□□ 0.87
FAM49B-214ENST00000519540 DPY19L2Q6NUT2 758 aa20.49■□□□□ 0.87
FAM49B-214ENST00000519540 LRRC55Q6ZSA7 311 aa20.49■□□□□ 0.87
FAM49B-214ENST00000519540 CNGA4Q8IV77 575 aa20.49■□□□□ 0.87
FAM49B-214ENST00000519540 SCFD1Q8WVM8 642 aa20.49■□□□□ 0.87
FAM49B-214ENST00000519540 PPP1R13BQ96KQ4 1090 aa20.49■□□□□ 0.87
FAM49B-214ENST00000519540 PRIMPOLQ96LW4 560 aa20.49■□□□□ 0.87
FAM49B-214ENST00000519540 WRAP73Q9P2S5 460 aaPredicted RBP20.49■□□□□ 0.87
FAM49B-214ENST00000519540 CSADQ9Y600 493 aa20.49■□□□□ 0.87
FAM49B-214ENST00000519540 PAPPA2Q9BXP8 1791 aa20.48■□□□□ 0.87
FAM49B-214ENST00000519540 SPDYE16A6NNV3 312 aaPredicted RBP20.48■□□□□ 0.87
FAM49B-214ENST00000519540 PES1O00541 588 aaKnown RBP20.48■□□□□ 0.87
FAM49B-214ENST00000519540 KIF20AO95235 890 aa20.48■□□□□ 0.87
FAM49B-214ENST00000519540 TPM1P09493 284 aa20.48■□□□□ 0.87
FAM49B-214ENST00000519540 ITGB3BPQ13352 177 aaPredicted RBP20.48■□□□□ 0.87
FAM49B-214ENST00000519540 MIIPQ5JXC2 388 aa20.48■□□□□ 0.87
FAM49B-214ENST00000519540 ARHGEF16Q5VV41 709 aa20.48■□□□□ 0.87
FAM49B-214ENST00000519540 CCDC51Q96ER9 411 aa20.48■□□□□ 0.87
FAM49B-214ENST00000519540 L3MBTL3Q96JM7 780 aaPredicted RBP20.48■□□□□ 0.87
FAM49B-214ENST00000519540 NACC1Q96RE7 527 aa20.48■□□□□ 0.87
FAM49B-214ENST00000519540 TEX13BQ9BXU2 312 aa20.48■□□□□ 0.87
FAM49B-214ENST00000519540 PKD2L1Q9P0L9 805 aa20.48■□□□□ 0.87
FAM49B-214ENST00000519540 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.48■□□□□ 0.87
FAM49B-214ENST00000519540 DDX39AO00148 427 aaKnown RBP20.48■□□□□ 0.87
FAM49B-214ENST00000519540 ZBTB39O15060 712 aa20.48■□□□□ 0.87
FAM49B-214ENST00000519540 MYCLP12524 364 aaPredicted RBP20.48■□□□□ 0.87
FAM49B-214ENST00000519540 NEK9Q8TD19 979 aa20.48■□□□□ 0.87
FAM49B-214ENST00000519540 NOC4LQ9BVI4 516 aaKnown RBP20.48■□□□□ 0.87
FAM49B-214ENST00000519540 RNF225M0QZC1 329 aaPredicted RBP20.47■□□□□ 0.87
FAM49B-214ENST00000519540 NKRFO15226 690 aaKnown RBP eCLIP20.47■□□□□ 0.87
FAM49B-214ENST00000519540 C1orf186Q6ZWK4 172 aa20.47■□□□□ 0.87
FAM49B-214ENST00000519540 MIER3Q7Z3K6 550 aa20.47■□□□□ 0.87
FAM49B-214ENST00000519540 SFR1Q86XK3 245 aa20.47■□□□□ 0.87
FAM49B-214ENST00000519540 CNKSR2Q8WXI2 1034 aa20.47■□□□□ 0.87
FAM49B-214ENST00000519540 NAA15Q9BXJ9 866 aaKnown RBP20.47■□□□□ 0.87
FAM49B-214ENST00000519540 KCTD10Q9H3F6 313 aa20.47■□□□□ 0.87
FAM49B-214ENST00000519540 RSPH10B2B2RC85 870 aa20.46■□□□□ 0.87
FAM49B-214ENST00000519540 CCP110O43303 1012 aa20.46■□□□□ 0.87
FAM49B-214ENST00000519540 RSPH10BP0C881 870 aa20.46■□□□□ 0.87
FAM49B-214ENST00000519540 IREB2P48200 963 aaKnown RBP20.46■□□□□ 0.87
FAM49B-214ENST00000519540 FKBP3Q00688 224 aaKnown RBP20.46■□□□□ 0.87
FAM49B-214ENST00000519540 TBC1D8BQ0IIM8 1120 aa20.46■□□□□ 0.87
FAM49B-214ENST00000519540 XRRA1Q6P2D8 792 aa20.46■□□□□ 0.87
FAM49B-214ENST00000519540 USP50Q70EL3 339 aaPredicted RBP20.46■□□□□ 0.87
FAM49B-214ENST00000519540 NELFCDQ8IXH7 590 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms