RNA–Protein interactions for RNA: ENST00000519485.1

CSMD3-209, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 3

Gene CSMD3, Length 452 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-209ENST00000519485 GFRA1P56159 465 aa4.89□□□□□ -1.63
CSMD3-209ENST00000519485 ZNF227Q86WZ6 799 aa4.89□□□□□ -1.63
CSMD3-209ENST00000519485 PPIL6Q8IXY8 311 aa4.89□□□□□ -1.63
CSMD3-209ENST00000519485 IFNL2Q8IZJ0 200 aa4.89□□□□□ -1.63
CSMD3-209ENST00000519485 FAM169BQ8N8A8 192 aa4.89□□□□□ -1.63
CSMD3-209ENST00000519485 GNRHR2Q96P88 292 aa4.89□□□□□ -1.63
CSMD3-209ENST00000519485 CEP89Q96ST8 783 aa4.89□□□□□ -1.63
CSMD3-209ENST00000519485 SLC6A20Q9NP91 592 aa4.89□□□□□ -1.63
CSMD3-209ENST00000519485 KCND1Q9NSA2 647 aa4.89□□□□□ -1.63
CSMD3-209ENST00000519485 CLDND1Q9NY35 253 aa4.89□□□□□ -1.63
CSMD3-209ENST00000519485 PCDHA2Q9Y5H9 948 aa4.89□□□□□ -1.63
CSMD3-209ENST00000519485 RB1CC1Q8TDY2 1594 aa4.89□□□□□ -1.63
CSMD3-209ENST00000519485 ABCC9O60706 1549 aa4.88□□□□□ -1.63
CSMD3-209ENST00000519485 TBX1O43435 398 aa4.88□□□□□ -1.63
CSMD3-209ENST00000519485 ITGAVP06756 1048 aa4.88□□□□□ -1.63
CSMD3-209ENST00000519485 MCM7P33993 719 aa4.88□□□□□ -1.63
CSMD3-209ENST00000519485 PTH1RQ03431 593 aa4.88□□□□□ -1.63
CSMD3-209ENST00000519485 AGBL4Q5VU57 503 aa4.88□□□□□ -1.63
CSMD3-209ENST00000519485 IGFL4Q6B9Z1 124 aa4.88□□□□□ -1.63
CSMD3-209ENST00000519485 NEIL1Q96FI4 390 aaPredicted RBP4.88□□□□□ -1.63
CSMD3-209ENST00000519485 C1orf159Q96HA4 380 aa4.88□□□□□ -1.63
CSMD3-209ENST00000519485 MSL2Q9HCI7 577 aa4.88□□□□□ -1.63
CSMD3-209ENST00000519485 SLC30A1Q9Y6M5 507 aa4.88□□□□□ -1.63
CSMD3-209ENST00000519485 WRNQ14191 1432 aaPredicted RBP eCLIP4.88□□□□□ -1.63
CSMD3-209ENST00000519485 RAD17O75943 681 aa4.87□□□□□ -1.63
CSMD3-209ENST00000519485 LCP1P13796 627 aa4.87□□□□□ -1.63
CSMD3-209ENST00000519485 ATF4P18848 351 aaPredicted RBP4.87□□□□□ -1.63
CSMD3-209ENST00000519485 ECI1P42126 302 aa4.87□□□□□ -1.63
CSMD3-209ENST00000519485 INHBCP55103 352 aa4.87□□□□□ -1.63
CSMD3-209ENST00000519485 NRN1LQ496H8 165 aa4.87□□□□□ -1.63
CSMD3-209ENST00000519485 USP39Q53GS9 565 aaKnown RBP4.87□□□□□ -1.63
CSMD3-209ENST00000519485 SLC35F1Q5T1Q4 408 aa4.87□□□□□ -1.63
CSMD3-209ENST00000519485 DENND5AQ6IQ26 1287 aa4.87□□□□□ -1.63
CSMD3-209ENST00000519485 Q6ZSN1 163 aa4.87□□□□□ -1.63
CSMD3-209ENST00000519485 TAX1BP1Q86VP1 789 aa4.87□□□□□ -1.63
CSMD3-209ENST00000519485 GIMAP8Q8ND71 665 aaPredicted RBP4.87□□□□□ -1.63
CSMD3-209ENST00000519485 LGR4Q9BXB1 951 aa4.87□□□□□ -1.63
CSMD3-209ENST00000519485 IKZF4Q9H2S9 585 aa4.87□□□□□ -1.63
CSMD3-209ENST00000519485 RBPJLQ9UBG7 517 aa4.87□□□□□ -1.63
CSMD3-209ENST00000519485 MRVI1Q9Y6F6 885 aa4.87□□□□□ -1.63
CSMD3-209ENST00000519485 E9PSI1 815 aa4.86□□□□□ -1.63
CSMD3-209ENST00000519485 PLSCR1O15162 318 aa4.86□□□□□ -1.63
CSMD3-209ENST00000519485 FBXO21O94952 628 aa4.86□□□□□ -1.63
CSMD3-209ENST00000519485 FAHP16930 419 aa4.86□□□□□ -1.63
CSMD3-209ENST00000519485 USP10Q14694 798 aaKnown RBP4.86□□□□□ -1.63
CSMD3-209ENST00000519485 FUKQ8N0W3 1084 aa4.86□□□□□ -1.63
CSMD3-209ENST00000519485 TMEM145Q8NBT3 493 aa4.86□□□□□ -1.63
CSMD3-209ENST00000519485 PPP1R14AQ96A00 147 aa4.86□□□□□ -1.63
CSMD3-209ENST00000519485 CHAMP1Q96JM3 812 aa4.86□□□□□ -1.63
CSMD3-209ENST00000519485 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.86□□□□□ -1.63
CSMD3-209ENST00000519485 TRIM8Q9BZR9 551 aa4.86□□□□□ -1.63
CSMD3-209ENST00000519485 ZFP69BQ9UJL9 534 aa4.86□□□□□ -1.63
CSMD3-209ENST00000519485 CUTAO60888 179 aa4.85□□□□□ -1.63
CSMD3-209ENST00000519485 CKMP06732 381 aa4.85□□□□□ -1.63
CSMD3-209ENST00000519485 ENO2P09104 434 aaPredicted RBP4.85□□□□□ -1.63
CSMD3-209ENST00000519485 TGM1P22735 817 aa4.85□□□□□ -1.63
CSMD3-209ENST00000519485 SF1Q15637 639 aaKnown RBP4.85□□□□□ -1.63
CSMD3-209ENST00000519485 SKIDA1Q1XH10 827 aa4.85□□□□□ -1.63
CSMD3-209ENST00000519485 PRSS53Q2L4Q9 553 aa4.85□□□□□ -1.63
CSMD3-209ENST00000519485 MAMDC4Q6UXC1 1216 aa4.85□□□□□ -1.63
CSMD3-209ENST00000519485 POLNQ7Z5Q5 900 aa4.85□□□□□ -1.63
CSMD3-209ENST00000519485 CLEC4DQ8WXI8 215 aa4.85□□□□□ -1.63
CSMD3-209ENST00000519485 EXTL1Q92935 676 aa4.85□□□□□ -1.63
CSMD3-209ENST00000519485 LRRC37BQ96QE4 947 aa4.85□□□□□ -1.63
CSMD3-209ENST00000519485 GPR27Q9NS67 375 aa4.85□□□□□ -1.63
CSMD3-209ENST00000519485 NUB1Q9Y5A7 615 aa4.85□□□□□ -1.63
CSMD3-209ENST00000519485 EEA1Q15075 1411 aa4.85□□□□□ -1.63
CSMD3-209ENST00000519485 H0Y858 1186 aa4.84□□□□□ -1.63
CSMD3-209ENST00000519485 DNAJA1P31689 397 aaKnown RBP4.84□□□□□ -1.63
CSMD3-209ENST00000519485 RAC3P60763 192 aa4.84□□□□□ -1.63
CSMD3-209ENST00000519485 MAP4K2Q12851 820 aa4.84□□□□□ -1.63
CSMD3-209ENST00000519485 DUSP8Q13202 625 aa4.84□□□□□ -1.63
CSMD3-209ENST00000519485 LSM12Q3MHD2 195 aaKnown RBP4.84□□□□□ -1.63
CSMD3-209ENST00000519485 PAN2Q504Q3 1202 aaKnown RBP4.84□□□□□ -1.63
CSMD3-209ENST00000519485 RSPO2Q6UXX9 243 aaPredicted RBP4.84□□□□□ -1.63
CSMD3-209ENST00000519485 GPR155Q7Z3F1 870 aa4.84□□□□□ -1.63
CSMD3-209ENST00000519485 UHMK1Q8TAS1 419 aaKnown RBP4.84□□□□□ -1.63
CSMD3-209ENST00000519485 CACTINQ8WUQ7 758 aaKnown RBP4.84□□□□□ -1.63
CSMD3-209ENST00000519485 FAM89AQ96GI7 184 aa4.84□□□□□ -1.63
CSMD3-209ENST00000519485 CARD11Q9BXL7 1154 aa4.84□□□□□ -1.63
CSMD3-209ENST00000519485 ARHGAP20Q9P2F6 1191 aa4.84□□□□□ -1.63
CSMD3-209ENST00000519485 OAZ3Q9UMX2 235 aa4.84□□□□□ -1.63
CSMD3-209ENST00000519485 R3HCC1Q9Y3T6 440 aaKnown RBP4.84□□□□□ -1.63
CSMD3-209ENST00000519485 ZNF839A8K0R7 811 aa4.83□□□□□ -1.64
CSMD3-209ENST00000519485 U2SURPO15042 1029 aaKnown RBP4.83□□□□□ -1.64
CSMD3-209ENST00000519485 SUSD5O60279 629 aa4.83□□□□□ -1.64
CSMD3-209ENST00000519485 ACO1P21399 889 aaKnown RBP4.83□□□□□ -1.64
CSMD3-209ENST00000519485 ACRV1P26436 265 aa4.83□□□□□ -1.64
CSMD3-209ENST00000519485 POLD1P28340 1107 aa4.83□□□□□ -1.64
CSMD3-209ENST00000519485 EPHA5P54756 1037 aa4.83□□□□□ -1.64
CSMD3-209ENST00000519485 ARID5AQ03989 594 aa4.83□□□□□ -1.64
CSMD3-209ENST00000519485 ZNF568Q3ZCX4 644 aa4.83□□□□□ -1.64
CSMD3-209ENST00000519485 SV2CQ496J9 727 aa4.83□□□□□ -1.64
CSMD3-209ENST00000519485 HABP4Q5JVS0 413 aaKnown RBP4.83□□□□□ -1.64
CSMD3-209ENST00000519485 CD276Q5ZPR3 534 aa4.83□□□□□ -1.64
CSMD3-209ENST00000519485 LARP1BQ659C4 914 aaKnown RBP4.83□□□□□ -1.64
CSMD3-209ENST00000519485 OTOP3Q7RTS5 596 aa4.83□□□□□ -1.64
CSMD3-209ENST00000519485 STPG3Q8N7X2 389 aa4.83□□□□□ -1.64
CSMD3-209ENST00000519485 PIP4K2CQ8TBX8 421 aa4.83□□□□□ -1.64
CSMD3-209ENST00000519485 CSRNP2Q9H175 543 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms