RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 CEP55Q53EZ4 464 aa10.68□□□□□ -0.7
HDAC3-215ENST00000519474 AFAP1L1Q8TED9 768 aa10.68□□□□□ -0.7
HDAC3-215ENST00000519474 ATP6V0A1Q93050 837 aa10.68□□□□□ -0.7
HDAC3-215ENST00000519474 PCYT2Q99447 389 aa10.68□□□□□ -0.7
HDAC3-215ENST00000519474 RNF26Q9BY78 433 aaPredicted RBP10.68□□□□□ -0.7
HDAC3-215ENST00000519474 OSBPL7Q9BZF2 842 aa10.68□□□□□ -0.7
HDAC3-215ENST00000519474 FTOQ9C0B1 505 aaKnown RBP eCLIP10.68□□□□□ -0.7
HDAC3-215ENST00000519474 GLT8D2Q9H1C3 349 aa10.68□□□□□ -0.7
HDAC3-215ENST00000519474 ZNF576Q9H609 170 aa10.68□□□□□ -0.7
HDAC3-215ENST00000519474 EHMT1Q9H9B1 1298 aa10.68□□□□□ -0.7
HDAC3-215ENST00000519474 PKD2L1Q9P0L9 805 aa10.68□□□□□ -0.7
HDAC3-215ENST00000519474 SLC4A7Q9Y6M7 1214 aa10.68□□□□□ -0.7
HDAC3-215ENST00000519474 TMEM265A0A087WTH1 108 aa10.67□□□□□ -0.7
HDAC3-215ENST00000519474 FAM86B1E9PN63 330 aa10.67□□□□□ -0.7
HDAC3-215ENST00000519474 DHX15O43143 795 aaKnown RBP10.67□□□□□ -0.7
HDAC3-215ENST00000519474 ATG7O95352 703 aa10.67□□□□□ -0.7
HDAC3-215ENST00000519474 CXCL10P02778 98 aa10.67□□□□□ -0.7
HDAC3-215ENST00000519474 FAM86B2P0C5J1 330 aa10.67□□□□□ -0.7
HDAC3-215ENST00000519474 MYOGP15173 224 aa10.67□□□□□ -0.7
HDAC3-215ENST00000519474 TCF7P36402 384 aaPredicted RBP10.67□□□□□ -0.7
HDAC3-215ENST00000519474 RABGGTBP53611 331 aa10.67□□□□□ -0.7
HDAC3-215ENST00000519474 ARHGAP4P98171 946 aa10.67□□□□□ -0.7
HDAC3-215ENST00000519474 AKAP17AQ02040 695 aaKnown RBP10.67□□□□□ -0.7
HDAC3-215ENST00000519474 SSRP1Q08945 709 aaKnown RBP10.67□□□□□ -0.7
HDAC3-215ENST00000519474 AP3B2Q13367 1082 aa10.67□□□□□ -0.7
HDAC3-215ENST00000519474 MBTPS1Q14703 1052 aa10.67□□□□□ -0.7
HDAC3-215ENST00000519474 LRRC8DQ7L1W4 858 aa10.67□□□□□ -0.7
HDAC3-215ENST00000519474 SERINC5Q86VE9 423 aa10.67□□□□□ -0.7
HDAC3-215ENST00000519474 TRIM50Q86XT4 487 aa10.67□□□□□ -0.7
HDAC3-215ENST00000519474 CCDC155Q8N6L0 562 aa10.67□□□□□ -0.7
HDAC3-215ENST00000519474 TIFAQ96CG3 184 aa10.67□□□□□ -0.7
HDAC3-215ENST00000519474 SLC26A6Q9BXS9 759 aa10.67□□□□□ -0.7
HDAC3-215ENST00000519474 MTIF3Q9H2K0 278 aaKnown RBP10.67□□□□□ -0.7
HDAC3-215ENST00000519474 AGO4Q9HCK5 861 aaKnown RBP10.67□□□□□ -0.7
HDAC3-215ENST00000519474 C6orf50Q9HD87 102 aa10.67□□□□□ -0.7
HDAC3-215ENST00000519474 YBX2Q9Y2T7 364 aaKnown RBP10.67□□□□□ -0.7
HDAC3-215ENST00000519474 TET1Q8NFU7 2136 aa10.67□□□□□ -0.7
HDAC3-215ENST00000519474 SCN5AQ14524 2016 aa10.67□□□□□ -0.7
HDAC3-215ENST00000519474 NFASCO94856 1347 aa10.66□□□□□ -0.7
HDAC3-215ENST00000519474 LGR5O75473 907 aa10.66□□□□□ -0.7
HDAC3-215ENST00000519474 PARNO95453 639 aaKnown RBP10.66□□□□□ -0.7
HDAC3-215ENST00000519474 ACTN1P12814 892 aa10.66□□□□□ -0.7
HDAC3-215ENST00000519474 GNA11P29992 359 aa10.66□□□□□ -0.7
HDAC3-215ENST00000519474 ZNF76P36508 570 aa10.66□□□□□ -0.7
HDAC3-215ENST00000519474 STK3Q13188 491 aa10.66□□□□□ -0.7
HDAC3-215ENST00000519474 ITGB3BPQ13352 177 aaPredicted RBP10.66□□□□□ -0.7
HDAC3-215ENST00000519474 NIPA1Q7RTP0 329 aa10.66□□□□□ -0.7
HDAC3-215ENST00000519474 PLA2G4DQ86XP0 818 aa10.66□□□□□ -0.7
HDAC3-215ENST00000519474 PHOSPHO2Q8TCD6 241 aa10.66□□□□□ -0.7
HDAC3-215ENST00000519474 MYLIPQ8WY64 445 aa10.66□□□□□ -0.7
HDAC3-215ENST00000519474 IL17RAQ96F46 866 aa10.66□□□□□ -0.7
HDAC3-215ENST00000519474 NKX2-4Q9H2Z4 354 aa10.66□□□□□ -0.7
HDAC3-215ENST00000519474 SMARCAD1Q9H4L7 1026 aa10.66□□□□□ -0.7
HDAC3-215ENST00000519474 SH3GLB2Q9NR46 395 aa10.66□□□□□ -0.7
HDAC3-215ENST00000519474 VPS54Q9P1Q0 977 aa10.66□□□□□ -0.7
HDAC3-215ENST00000519474 SLC9A2Q9UBY0 812 aa10.66□□□□□ -0.7
HDAC3-215ENST00000519474 MSRAQ9UJ68 235 aa10.66□□□□□ -0.7
HDAC3-215ENST00000519474 DOCK5Q9H7D0 1870 aa10.66□□□□□ -0.7
HDAC3-215ENST00000519474 IGLV3-22A0A075B6J6 115 aa10.65□□□□□ -0.7
HDAC3-215ENST00000519474 IGKV6D-21A0A0A0MT36 114 aa10.65□□□□□ -0.7
HDAC3-215ENST00000519474 ZBBXA8MT70 800 aa10.65□□□□□ -0.7
HDAC3-215ENST00000519474 RSPH10B2B2RC85 870 aa10.65□□□□□ -0.7
HDAC3-215ENST00000519474 DTNBO60941 627 aa10.65□□□□□ -0.7
HDAC3-215ENST00000519474 RSPH10BP0C881 870 aa10.65□□□□□ -0.7
HDAC3-215ENST00000519474 GNAT1P11488 350 aa10.65□□□□□ -0.7
HDAC3-215ENST00000519474 ATP2A2P16615 1042 aaKnown RBP10.65□□□□□ -0.7
HDAC3-215ENST00000519474 CIITAP33076 1130 aa10.65□□□□□ -0.7
HDAC3-215ENST00000519474 THPOP40225 353 aa10.65□□□□□ -0.7
HDAC3-215ENST00000519474 ANAPC15P60006 121 aa10.65□□□□□ -0.7
HDAC3-215ENST00000519474 ACTR2P61160 394 aa10.65□□□□□ -0.7
HDAC3-215ENST00000519474 FAM26DQ5JW98 314 aa10.65□□□□□ -0.7
HDAC3-215ENST00000519474 MARCH8Q5T0T0 291 aa10.65□□□□□ -0.7
HDAC3-215ENST00000519474 MCTP2Q6DN12 878 aa10.65□□□□□ -0.7
HDAC3-215ENST00000519474 SLC17A8Q8NDX2 589 aa10.65□□□□□ -0.7
HDAC3-215ENST00000519474 DBF4BQ8NFT6 615 aa10.65□□□□□ -0.7
HDAC3-215ENST00000519474 RASGRP4Q8TDF6 673 aa10.65□□□□□ -0.7
HDAC3-215ENST00000519474 CCDC12Q8WUD4 166 aaPredicted RBP10.65□□□□□ -0.7
HDAC3-215ENST00000519474 UIMC1Q96RL1 719 aa10.65□□□□□ -0.7
HDAC3-215ENST00000519474 TPCN1Q9ULQ1 816 aa10.65□□□□□ -0.7
HDAC3-215ENST00000519474 PCDHA11Q9Y5I1 949 aa10.65□□□□□ -0.7
HDAC3-215ENST00000519474 LAMA3Q16787 3333 aa10.64□□□□□ -0.71
HDAC3-215ENST00000519474 NRCAMQ92823 1304 aa10.64□□□□□ -0.71
HDAC3-215ENST00000519474 ABHD14A-ACY1A0A1B0GW23 586 aa10.64□□□□□ -0.71
HDAC3-215ENST00000519474 M0R2N6 131 aa10.64□□□□□ -0.71
HDAC3-215ENST00000519474 CCNE2O96020 404 aa10.64□□□□□ -0.71
HDAC3-215ENST00000519474 INSRRP14616 1297 aa10.64□□□□□ -0.71
HDAC3-215ENST00000519474 MARK3P27448 753 aa10.64□□□□□ -0.71
HDAC3-215ENST00000519474 USP11P51784 963 aa10.64□□□□□ -0.71
HDAC3-215ENST00000519474 NLRP5P59047 1200 aa10.64□□□□□ -0.71
HDAC3-215ENST00000519474 SCRN1Q12765 414 aa10.64□□□□□ -0.71
HDAC3-215ENST00000519474 RAB30Q15771 203 aa10.64□□□□□ -0.71
HDAC3-215ENST00000519474 CNKSR3Q6P9H4 555 aa10.64□□□□□ -0.71
HDAC3-215ENST00000519474 ABHD15Q6UXT9 468 aa10.64□□□□□ -0.71
HDAC3-215ENST00000519474 PLPPR4Q7Z2D5 763 aa10.64□□□□□ -0.71
HDAC3-215ENST00000519474 RPAINQ86UA6 219 aa10.64□□□□□ -0.71
HDAC3-215ENST00000519474 LMBR1Q8WVP7 490 aa10.64□□□□□ -0.71
HDAC3-215ENST00000519474 GLG1Q92896 1179 aa10.64□□□□□ -0.71
HDAC3-215ENST00000519474 AIFM3Q96NN9 605 aa10.64□□□□□ -0.71
HDAC3-215ENST00000519474 ARID3AQ99856 593 aa10.64□□□□□ -0.71
HDAC3-215ENST00000519474 SDF4Q9BRK5 362 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms