RNA–Protein interactions for RNA: ENST00000519207.5

SH2D4A-204, Transcript of SH2 domain containing 4A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SH2D4A, Length 1,984 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4A-204ENST00000519207 HHIPL2Q6UWX4 724 aa11.14□□□□□ -0.63
SH2D4A-204ENST00000519207 ADGRF4Q8IZF3 695 aa11.14□□□□□ -0.63
SH2D4A-204ENST00000519207 NOA1Q8NC60 698 aaKnown RBP11.14□□□□□ -0.63
SH2D4A-204ENST00000519207 CUL5Q93034 780 aa11.14□□□□□ -0.63
SH2D4A-204ENST00000519207 NHEJ1Q9H9Q4 299 aaPredicted RBP11.14□□□□□ -0.63
SH2D4A-204ENST00000519207 SLC39A2Q9NP94 309 aa11.14□□□□□ -0.63
SH2D4A-204ENST00000519207 GPCPD1Q9NPB8 672 aa11.14□□□□□ -0.63
SH2D4A-204ENST00000519207 DDX4Q9NQI0 724 aaKnown RBP11.14□□□□□ -0.63
SH2D4A-204ENST00000519207 MYH7BA7E2Y1 1941 aa11.14□□□□□ -0.63
SH2D4A-204ENST00000519207 A6NNZ2 444 aa11.14□□□□□ -0.63
SH2D4A-204ENST00000519207 ZBTB5O15062 677 aa11.14□□□□□ -0.63
SH2D4A-204ENST00000519207 MCM3P25205 808 aa11.14□□□□□ -0.63
SH2D4A-204ENST00000519207 CALRP27797 417 aaKnown RBP11.14□□□□□ -0.63
SH2D4A-204ENST00000519207 SHMT1P34896 483 aa11.14□□□□□ -0.63
SH2D4A-204ENST00000519207 USP14P54578 494 aa11.14□□□□□ -0.63
SH2D4A-204ENST00000519207 EHHADHQ08426 723 aa11.14□□□□□ -0.63
SH2D4A-204ENST00000519207 GRIK3Q13003 919 aa11.14□□□□□ -0.63
SH2D4A-204ENST00000519207 TUBB8Q3ZCM7 444 aa11.14□□□□□ -0.63
SH2D4A-204ENST00000519207 VWA3BQ502W6 1294 aa11.14□□□□□ -0.63
SH2D4A-204ENST00000519207 PAPD7Q5XG87 772 aaKnown RBP11.14□□□□□ -0.63
SH2D4A-204ENST00000519207 KIAA1328Q86T90 577 aa11.14□□□□□ -0.63
SH2D4A-204ENST00000519207 CCDC84Q86UT8 332 aaPredicted RBP11.14□□□□□ -0.63
SH2D4A-204ENST00000519207 CERS5Q8N5B7 392 aa11.14□□□□□ -0.63
SH2D4A-204ENST00000519207 SNX29Q8TEQ0 813 aa11.14□□□□□ -0.63
SH2D4A-204ENST00000519207 JAKMIP2Q96AA8 810 aa11.14□□□□□ -0.63
SH2D4A-204ENST00000519207 CCDC17Q96LX7 622 aa11.14□□□□□ -0.63
SH2D4A-204ENST00000519207 TSGA10Q9BZW7 698 aa11.14□□□□□ -0.63
SH2D4A-204ENST00000519207 ZC3H12CQ9C0D7 883 aaKnown RBP11.14□□□□□ -0.63
SH2D4A-204ENST00000519207 EHD4Q9H223 541 aa11.14□□□□□ -0.63
SH2D4A-204ENST00000519207 VEZTQ9HBM0 779 aa11.14□□□□□ -0.63
SH2D4A-204ENST00000519207 ZNF277Q9NRM2 450 aaPredicted RBP11.14□□□□□ -0.63
SH2D4A-204ENST00000519207 USP40Q9NVE5 1235 aa11.14□□□□□ -0.63
SH2D4A-204ENST00000519207 GGA2Q9UJY4 613 aa11.14□□□□□ -0.63
SH2D4A-204ENST00000519207 ANO9A1A5B4 782 aa11.13□□□□□ -0.63
SH2D4A-204ENST00000519207 HLA-DOAP06340 250 aa11.13□□□□□ -0.63
SH2D4A-204ENST00000519207 POTEIP0CG38 1075 aa11.13□□□□□ -0.63
SH2D4A-204ENST00000519207 POTEJP0CG39 1038 aa11.13□□□□□ -0.63
SH2D4A-204ENST00000519207 ALDH1B1P30837 517 aa11.13□□□□□ -0.63
SH2D4A-204ENST00000519207 SMTNP53814 917 aa11.13□□□□□ -0.63
SH2D4A-204ENST00000519207 PPP2R5AQ15172 486 aa11.13□□□□□ -0.63
SH2D4A-204ENST00000519207 MAN2A1Q16706 1144 aa11.13□□□□□ -0.63
SH2D4A-204ENST00000519207 HYIQ5T013 277 aa11.13□□□□□ -0.63
SH2D4A-204ENST00000519207 EMC10Q5UCC4 262 aa11.13□□□□□ -0.63
SH2D4A-204ENST00000519207 FAM76AQ8TAV0 307 aa11.13□□□□□ -0.63
SH2D4A-204ENST00000519207 RPGRIP1Q96KN7 1286 aa11.13□□□□□ -0.63
SH2D4A-204ENST00000519207 PCMTD1Q96MG8 357 aaPredicted RBP11.13□□□□□ -0.63
SH2D4A-204ENST00000519207 PURBQ96QR8 312 aaKnown RBP11.13□□□□□ -0.63
SH2D4A-204ENST00000519207 NDST4Q9H3R1 872 aa11.13□□□□□ -0.63
SH2D4A-204ENST00000519207 DDX25Q9UHL0 483 aaKnown RBP11.13□□□□□ -0.63
SH2D4A-204ENST00000519207 PLAGL2Q9UPG8 496 aa11.13□□□□□ -0.63
SH2D4A-204ENST00000519207 SIK3Q9Y2K2 1263 aa11.13□□□□□ -0.63
SH2D4A-204ENST00000519207 POTEMA6NI47 508 aa11.12□□□□□ -0.63
SH2D4A-204ENST00000519207 RIMBP2O15034 1052 aa11.12□□□□□ -0.63
SH2D4A-204ENST00000519207 PPP1R11O60927 126 aaPredicted RBP11.12□□□□□ -0.63
SH2D4A-204ENST00000519207 TNNI2P48788 182 aa11.12□□□□□ -0.63
SH2D4A-204ENST00000519207 KLK7P49862 253 aa11.12□□□□□ -0.63
SH2D4A-204ENST00000519207 SETQ01105 290 aaPredicted RBP11.12□□□□□ -0.63
SH2D4A-204ENST00000519207 TLDC1Q6P9B6 456 aa11.12□□□□□ -0.63
SH2D4A-204ENST00000519207 RTKN2Q8IZC4 609 aa11.12□□□□□ -0.63
SH2D4A-204ENST00000519207 GIMAP7Q8NHV1 300 aa11.12□□□□□ -0.63
SH2D4A-204ENST00000519207 DDX12PQ92771 950 aa11.12□□□□□ -0.63
SH2D4A-204ENST00000519207 NT5C3AQ9H0P0 336 aa11.12□□□□□ -0.63
SH2D4A-204ENST00000519207 TRIM10Q9UDY6 481 aa11.12□□□□□ -0.63
SH2D4A-204ENST00000519207 SAR1BQ9Y6B6 198 aa11.12□□□□□ -0.63
SH2D4A-204ENST00000519207 KDM3AQ9Y4C1 1321 aa11.12□□□□□ -0.63
SH2D4A-204ENST00000519207 MEFVO15553 781 aaPredicted RBP11.12□□□□□ -0.63
SH2D4A-204ENST00000519207 RHOXF2BP0C7M4 288 aa11.12□□□□□ -0.63
SH2D4A-204ENST00000519207 EPB41P11171 864 aaKnown RBP11.12□□□□□ -0.63
SH2D4A-204ENST00000519207 VAV2P52735 878 aa11.12□□□□□ -0.63
SH2D4A-204ENST00000519207 EIF6P56537 245 aaKnown RBP11.12□□□□□ -0.63
SH2D4A-204ENST00000519207 CDC42EP5Q6NZY7 148 aa11.12□□□□□ -0.63
SH2D4A-204ENST00000519207 B4GALNT4Q76KP1 1039 aa11.12□□□□□ -0.63
SH2D4A-204ENST00000519207 DYMQ7RTS9 669 aa11.12□□□□□ -0.63
SH2D4A-204ENST00000519207 HAS1Q92839 578 aa11.12□□□□□ -0.63
SH2D4A-204ENST00000519207 HPS3Q969F9 1004 aa11.12□□□□□ -0.63
SH2D4A-204ENST00000519207 TEKT1Q969V4 418 aa11.12□□□□□ -0.63
SH2D4A-204ENST00000519207 EEF2KMTQ96G04 330 aa11.12□□□□□ -0.63
SH2D4A-204ENST00000519207 CCDC42Q96M95 316 aa11.12□□□□□ -0.63
SH2D4A-204ENST00000519207 TSG101Q99816 390 aa11.12□□□□□ -0.63
SH2D4A-204ENST00000519207 RHOXF2Q9BQY4 288 aa11.12□□□□□ -0.63
SH2D4A-204ENST00000519207 EDEM3Q9BZQ6 932 aa11.12□□□□□ -0.63
SH2D4A-204ENST00000519207 PSTPIP2Q9H939 334 aa11.12□□□□□ -0.63
SH2D4A-204ENST00000519207 F8W031 263 aaPredicted RBP11.11□□□□□ -0.63
SH2D4A-204ENST00000519207 MYO1FO00160 1098 aa11.11□□□□□ -0.63
SH2D4A-204ENST00000519207 IRF6O14896 467 aa11.11□□□□□ -0.63
SH2D4A-204ENST00000519207 GGCXP38435 758 aa11.11□□□□□ -0.63
SH2D4A-204ENST00000519207 CKAP4Q07065 602 aaKnown RBP11.11□□□□□ -0.63
SH2D4A-204ENST00000519207 KIF5AQ12840 1032 aa11.11□□□□□ -0.63
SH2D4A-204ENST00000519207 SPA17Q15506 151 aa11.11□□□□□ -0.63
SH2D4A-204ENST00000519207 UBE2SQ16763 222 aa11.11□□□□□ -0.63
SH2D4A-204ENST00000519207 CCDC96Q2M329 555 aa11.11□□□□□ -0.63
SH2D4A-204ENST00000519207 APOBEC3HQ6NTF7 200 aaKnown RBP11.11□□□□□ -0.63
SH2D4A-204ENST00000519207 LRRC55Q6ZSA7 311 aa11.11□□□□□ -0.63
SH2D4A-204ENST00000519207 FMNL3Q8IVF7 1028 aa11.11□□□□□ -0.63
SH2D4A-204ENST00000519207 BCAS4Q8TDM0 211 aa11.11□□□□□ -0.63
SH2D4A-204ENST00000519207 MKL1Q969V6 931 aa11.11□□□□□ -0.63
SH2D4A-204ENST00000519207 DNAJC19Q96DA6 116 aa11.11□□□□□ -0.63
SH2D4A-204ENST00000519207 NUDT12Q9BQG2 462 aa11.11□□□□□ -0.63
SH2D4A-204ENST00000519207 MRIQ9BWK5 157 aa11.11□□□□□ -0.63
SH2D4A-204ENST00000519207 CAPS2Q9BXY5 557 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms