RNA–Protein interactions for RNA: ENST00000519115.5

SDCBP-206, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-206ENST00000519115 SCN5AQ14524 2016 aa8.59□□□□□ -1.03
SDCBP-206ENST00000519115 A0A1W2PQ27 194 aa8.59□□□□□ -1.03
SDCBP-206ENST00000519115 A0A1W2PQ64 194 aa8.59□□□□□ -1.03
SDCBP-206ENST00000519115 A0A1W2PQD8 194 aa8.59□□□□□ -1.03
SDCBP-206ENST00000519115 DCDC2CA8MYV0 355 aa8.59□□□□□ -1.03
SDCBP-206ENST00000519115 M0R2N6 131 aa8.59□□□□□ -1.03
SDCBP-206ENST00000519115 ARVCFO00192 962 aa8.59□□□□□ -1.03
SDCBP-206ENST00000519115 LAD1O00515 517 aa8.59□□□□□ -1.03
SDCBP-206ENST00000519115 NOP56O00567 594 aaKnown RBP8.59□□□□□ -1.03
SDCBP-206ENST00000519115 TRAK2O60296 914 aa8.59□□□□□ -1.03
SDCBP-206ENST00000519115 ATP9AO75110 1047 aa8.59□□□□□ -1.03
SDCBP-206ENST00000519115 CABYRO75952 493 aa8.59□□□□□ -1.03
SDCBP-206ENST00000519115 TGFB3P10600 412 aa8.59□□□□□ -1.03
SDCBP-206ENST00000519115 KRT2P35908 639 aa8.59□□□□□ -1.03
SDCBP-206ENST00000519115 ZNF76P36508 570 aa8.59□□□□□ -1.03
SDCBP-206ENST00000519115 MTMR1Q13613 665 aa8.59□□□□□ -1.03
SDCBP-206ENST00000519115 LAMC2Q13753 1193 aa8.59□□□□□ -1.03
SDCBP-206ENST00000519115 GNL2Q13823 731 aaKnown RBP8.59□□□□□ -1.03
SDCBP-206ENST00000519115 SLC39A14Q15043 492 aa8.59□□□□□ -1.03
SDCBP-206ENST00000519115 NPY5RQ15761 445 aa8.59□□□□□ -1.03
SDCBP-206ENST00000519115 DGKDQ16760 1214 aa8.59□□□□□ -1.03
SDCBP-206ENST00000519115 NBPF20Q3BBV1 942 aa8.59□□□□□ -1.03
SDCBP-206ENST00000519115 HSDL1Q3SXM5 330 aa8.59□□□□□ -1.03
SDCBP-206ENST00000519115 FAM47CQ5HY64 1035 aa8.59□□□□□ -1.03
SDCBP-206ENST00000519115 C1orf53Q5VUE5 145 aa8.59□□□□□ -1.03
SDCBP-206ENST00000519115 ADALQ6DHV7 355 aa8.59□□□□□ -1.03
SDCBP-206ENST00000519115 MCTP1Q6DN14 999 aa8.59□□□□□ -1.03
SDCBP-206ENST00000519115 DIS3L2Q8IYB7 885 aaKnown RBP8.59□□□□□ -1.03
SDCBP-206ENST00000519115 ELOA2Q8IYF1 753 aaPredicted RBP8.59□□□□□ -1.03
SDCBP-206ENST00000519115 BLIDQ8IZY5 108 aa8.59□□□□□ -1.03
SDCBP-206ENST00000519115 ZNF579Q8NAF0 562 aaKnown RBP8.59□□□□□ -1.03
SDCBP-206ENST00000519115 PPTC7Q8NI37 304 aa8.59□□□□□ -1.03
SDCBP-206ENST00000519115 EMID1Q96A84 441 aaPredicted RBP8.59□□□□□ -1.03
SDCBP-206ENST00000519115 GPRASP2Q96D09 838 aa8.59□□□□□ -1.03
SDCBP-206ENST00000519115 NAP1L4Q99733 375 aaKnown RBP8.59□□□□□ -1.03
SDCBP-206ENST00000519115 MXRA8Q9BRK3 442 aa8.59□□□□□ -1.03
SDCBP-206ENST00000519115 JADE2Q9NQC1 790 aa8.59□□□□□ -1.03
SDCBP-206ENST00000519115 NOL7Q9UMY1 257 aaKnown RBP8.59□□□□□ -1.03
SDCBP-206ENST00000519115 TANC1Q9C0D5 1861 aa8.59□□□□□ -1.03
SDCBP-206ENST00000519115 MROH7Q68CQ1 1323 aa8.58□□□□□ -1.04
SDCBP-206ENST00000519115 TRIM43BA6NCK2 446 aa8.58□□□□□ -1.04
SDCBP-206ENST00000519115 FAM86B1E9PN63 330 aa8.58□□□□□ -1.04
SDCBP-206ENST00000519115 DDX39AO00148 427 aaKnown RBP8.58□□□□□ -1.04
SDCBP-206ENST00000519115 KPNA6O60684 536 aa8.58□□□□□ -1.04
SDCBP-206ENST00000519115 CLTBP09497 229 aa8.58□□□□□ -1.04
SDCBP-206ENST00000519115 FAM86B2P0C5J1 330 aa8.58□□□□□ -1.04
SDCBP-206ENST00000519115 ARP10275 920 aa8.58□□□□□ -1.04
SDCBP-206ENST00000519115 KCNA2P16389 499 aa8.58□□□□□ -1.04
SDCBP-206ENST00000519115 MAGEA10P43363 369 aaPredicted RBP8.58□□□□□ -1.04
SDCBP-206ENST00000519115 CDK7P50613 346 aa8.58□□□□□ -1.04
SDCBP-206ENST00000519115 NUBP1P53384 320 aa8.58□□□□□ -1.04
SDCBP-206ENST00000519115 MDM2Q00987 491 aaPredicted RBP8.58□□□□□ -1.04
SDCBP-206ENST00000519115 DNM1Q05193 864 aaKnown RBP8.58□□□□□ -1.04
SDCBP-206ENST00000519115 FAAP100Q0VG06 881 aa8.58□□□□□ -1.04
SDCBP-206ENST00000519115 NEDD9Q14511 834 aa8.58□□□□□ -1.04
SDCBP-206ENST00000519115 CEP55Q53EZ4 464 aa8.58□□□□□ -1.04
SDCBP-206ENST00000519115 METTL7BQ6UX53 244 aa8.58□□□□□ -1.04
SDCBP-206ENST00000519115 ANKRD33Q7Z3H0 272 aa8.58□□□□□ -1.04
SDCBP-206ENST00000519115 KRT25Q7Z3Z0 450 aa8.58□□□□□ -1.04
SDCBP-206ENST00000519115 PLA2G4DQ86XP0 818 aa8.58□□□□□ -1.04
SDCBP-206ENST00000519115 TRIM50Q86XT4 487 aa8.58□□□□□ -1.04
SDCBP-206ENST00000519115 FAM126BQ8IXS8 530 aa8.58□□□□□ -1.04
SDCBP-206ENST00000519115 LINC00301Q8NCQ3 95 aa8.58□□□□□ -1.04
SDCBP-206ENST00000519115 OXER1Q8TDS5 423 aa8.58□□□□□ -1.04
SDCBP-206ENST00000519115 LEO1Q8WVC0 666 aaPredicted RBP8.58□□□□□ -1.04
SDCBP-206ENST00000519115 CRYGNQ8WXF5 182 aa8.58□□□□□ -1.04
SDCBP-206ENST00000519115 KAT2BQ92831 832 aa8.58□□□□□ -1.04
SDCBP-206ENST00000519115 TNFRSF25Q93038 417 aa8.58□□□□□ -1.04
SDCBP-206ENST00000519115 SYAP1Q96A49 352 aaPredicted RBP8.58□□□□□ -1.04
SDCBP-206ENST00000519115 TRIM43Q96BQ3 446 aaPredicted RBP8.58□□□□□ -1.04
SDCBP-206ENST00000519115 CDHR1Q96JP9 859 aa8.58□□□□□ -1.04
SDCBP-206ENST00000519115 SPATA32Q96LK8 384 aa8.58□□□□□ -1.04
SDCBP-206ENST00000519115 TRPV6Q9H1D0 765 aa8.58□□□□□ -1.04
SDCBP-206ENST00000519115 KCNH7Q9NS40 1196 aa8.58□□□□□ -1.04
SDCBP-206ENST00000519115 TMEM39AQ9NV64 488 aa8.58□□□□□ -1.04
SDCBP-206ENST00000519115 PRKAG2Q9UGJ0 569 aa8.58□□□□□ -1.04
SDCBP-206ENST00000519115 IGLV3-22A0A075B6J6 115 aa8.57□□□□□ -1.04
SDCBP-206ENST00000519115 FAM237AA0A1B0GTK4 181 aa8.57□□□□□ -1.04
SDCBP-206ENST00000519115 GOLGA6L4A6NEF3 574 aa8.57□□□□□ -1.04
SDCBP-206ENST00000519115 FAM205CA6NFA0 338 aa8.57□□□□□ -1.04
SDCBP-206ENST00000519115 BTBD18B2RXH4 712 aa8.57□□□□□ -1.04
SDCBP-206ENST00000519115 MEIS1O00470 390 aa8.57□□□□□ -1.04
SDCBP-206ENST00000519115 TLR3O15455 904 aaKnown RBP8.57□□□□□ -1.04
SDCBP-206ENST00000519115 B4GALT4O60513 344 aa8.57□□□□□ -1.04
SDCBP-206ENST00000519115 PRPF40AO75400 957 aaKnown RBP8.57□□□□□ -1.04
SDCBP-206ENST00000519115 F2P00734 622 aa8.57□□□□□ -1.04
SDCBP-206ENST00000519115 LGALS2P05162 132 aa8.57□□□□□ -1.04
SDCBP-206ENST00000519115 CYP3A4P08684 503 aa8.57□□□□□ -1.04
SDCBP-206ENST00000519115 HOXD8P13378 290 aaPredicted RBP8.57□□□□□ -1.04
SDCBP-206ENST00000519115 PRKCSHP14314 528 aaPredicted RBP8.57□□□□□ -1.04
SDCBP-206ENST00000519115 ITGB8P26012 769 aa8.57□□□□□ -1.04
SDCBP-206ENST00000519115 PSEN2P49810 448 aa8.57□□□□□ -1.04
SDCBP-206ENST00000519115 USP11P51784 963 aa8.57□□□□□ -1.04
SDCBP-206ENST00000519115 GUCY1B3Q02153 619 aa8.57□□□□□ -1.04
SDCBP-206ENST00000519115 MFSD10Q14728 455 aa8.57□□□□□ -1.04
SDCBP-206ENST00000519115 INF2Q27J81 1249 aa8.57□□□□□ -1.04
SDCBP-206ENST00000519115 KIAA0753Q2KHM9 967 aa8.57□□□□□ -1.04
SDCBP-206ENST00000519115 PRR16Q569H4 304 aa8.57□□□□□ -1.04
SDCBP-206ENST00000519115 UTP14CQ5TAP6 766 aaKnown RBP8.57□□□□□ -1.04
SDCBP-206ENST00000519115 ARL6IP4Q66PJ3 421 aaKnown RBP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms