RNA–Protein interactions for RNA: ENST00000518930.1

PCM1-209, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-209ENST00000518930 TCF7P36402 384 aaPredicted RBP27.35■■□□□ 1.97
PCM1-209ENST00000518930 TXKP42681 527 aa27.35■■□□□ 1.97
PCM1-209ENST00000518930 UNC45AQ9H3U1 944 aa27.35■■□□□ 1.97
PCM1-209ENST00000518930 PCDHA12Q9UN75 941 aa27.35■■□□□ 1.97
PCM1-209ENST00000518930 PHF24Q9UPV7 400 aa27.35■■□□□ 1.97
PCM1-209ENST00000518930 CCNE2O96020 404 aa27.34■■□□□ 1.97
PCM1-209ENST00000518930 HOXD8P13378 290 aaPredicted RBP27.34■■□□□ 1.97
PCM1-209ENST00000518930 SFNP31947 248 aa27.34■■□□□ 1.97
PCM1-209ENST00000518930 JAK3P52333 1124 aa27.34■■□□□ 1.97
PCM1-209ENST00000518930 SF3A1Q15459 793 aaKnown RBP27.34■■□□□ 1.97
PCM1-209ENST00000518930 TMEM266Q2M3C6 531 aa27.34■■□□□ 1.97
PCM1-209ENST00000518930 MIS18BP1Q6P0N0 1132 aa27.34■■□□□ 1.97
PCM1-209ENST00000518930 TTC12Q9H892 705 aaPredicted RBP27.34■■□□□ 1.97
PCM1-209ENST00000518930 CIZ1Q9ULV3 898 aaPredicted RBP27.34■■□□□ 1.97
PCM1-209ENST00000518930 ATP6V1DQ9Y5K8 247 aa27.34■■□□□ 1.97
PCM1-209ENST00000518930 CABYRO75952 493 aa27.33■■□□□ 1.97
PCM1-209ENST00000518930 ZNF286BP0CG31 522 aa27.33■■□□□ 1.97
PCM1-209ENST00000518930 PURAQ00577 322 aaKnown RBP27.33■■□□□ 1.97
PCM1-209ENST00000518930 PPP2R5CQ13362 524 aa27.33■■□□□ 1.97
PCM1-209ENST00000518930 UTP14CQ5TAP6 766 aaKnown RBP27.33■■□□□ 1.97
PCM1-209ENST00000518930 CXCL17Q6UXB2 119 aa27.33■■□□□ 1.97
PCM1-209ENST00000518930 MIER3Q7Z3K6 550 aa27.33■■□□□ 1.97
PCM1-209ENST00000518930 DIS3LQ8TF46 1054 aaKnown RBP27.33■■□□□ 1.97
PCM1-209ENST00000518930 GLT1D1Q96MS3 346 aa27.33■■□□□ 1.97
PCM1-209ENST00000518930 MTG1Q9BT17 334 aaPredicted RBP27.33■■□□□ 1.97
PCM1-209ENST00000518930 VAV3Q9UKW4 847 aa27.33■■□□□ 1.97
PCM1-209ENST00000518930 ZDHHC9Q9Y397 364 aa27.33■■□□□ 1.97
PCM1-209ENST00000518930 TELO2Q9Y4R8 837 aa27.33■■□□□ 1.97
PCM1-209ENST00000518930 A0A1W2PQ45 241 aaPredicted RBP27.32■■□□□ 1.96
PCM1-209ENST00000518930 GSTTP1A0A1W2PQM5 241 aa27.32■■□□□ 1.96
PCM1-209ENST00000518930 A0A1W2PQY0 241 aa27.32■■□□□ 1.96
PCM1-209ENST00000518930 LGALS2P05162 132 aa27.32■■□□□ 1.96
PCM1-209ENST00000518930 PSAPP07602 524 aa27.32■■□□□ 1.96
PCM1-209ENST00000518930 ATP2C1P98194 919 aaPredicted RBP27.32■■□□□ 1.96
PCM1-209ENST00000518930 FOXD4L6Q3SYB3 417 aaPredicted RBP27.32■■□□□ 1.96
PCM1-209ENST00000518930 FOXD4L3Q6VB84 417 aaPredicted RBP27.32■■□□□ 1.96
PCM1-209ENST00000518930 NECAB2Q7Z6G3 386 aa27.32■■□□□ 1.96
PCM1-209ENST00000518930 C4orf32Q8N8J7 132 aa27.32■■□□□ 1.96
PCM1-209ENST00000518930 RDM1Q8NG50 284 aa27.32■■□□□ 1.96
PCM1-209ENST00000518930 FERMT2Q96AC1 680 aa27.32■■□□□ 1.96
PCM1-209ENST00000518930 VTI1AQ96AJ9 217 aa27.32■■□□□ 1.96
PCM1-209ENST00000518930 KATNAL1Q9BW62 490 aa27.32■■□□□ 1.96
PCM1-209ENST00000518930 C11orf49Q9H6J7 331 aa27.32■■□□□ 1.96
PCM1-209ENST00000518930 AZI2Q9H6S1 392 aa27.32■■□□□ 1.96
PCM1-209ENST00000518930 ZNF215Q9UL58 517 aaPredicted RBP27.32■■□□□ 1.96
PCM1-209ENST00000518930 BACH1O14867 736 aa27.31■■□□□ 1.96
PCM1-209ENST00000518930 SUPT20HL2P0C7V6 817 aa27.31■■□□□ 1.96
PCM1-209ENST00000518930 PRPHP41219 470 aa27.31■■□□□ 1.96
PCM1-209ENST00000518930 MNX1P50219 401 aaPredicted RBP27.31■■□□□ 1.96
PCM1-209ENST00000518930 CEBPZQ03701 1054 aaKnown RBP27.31■■□□□ 1.96
PCM1-209ENST00000518930 NCAPH2Q6IBW4 605 aa27.31■■□□□ 1.96
PCM1-209ENST00000518930 PAWRQ96IZ0 340 aaKnown RBP27.31■■□□□ 1.96
PCM1-209ENST00000518930 FTOQ9C0B1 505 aaKnown RBP eCLIP27.31■■□□□ 1.965e-6■□□□□ 9.9
PCM1-209ENST00000518930 DISC1Q9NRI5 854 aa27.31■■□□□ 1.96
PCM1-209ENST00000518930 PCDHA10Q9Y5I2 948 aa27.31■■□□□ 1.96
PCM1-209ENST00000518930 CLIC4Q9Y696 253 aa27.31■■□□□ 1.96
PCM1-209ENST00000518930 EMSYQ7Z589 1322 aa27.31■■□□□ 1.96
PCM1-209ENST00000518930 ATG7O95352 703 aa27.3■■□□□ 1.96
PCM1-209ENST00000518930 FAM160B1Q5W0V3 765 aa27.3■■□□□ 1.96
PCM1-209ENST00000518930 ABHD15Q6UXT9 468 aa27.3■■□□□ 1.96
PCM1-209ENST00000518930 GLG1Q92896 1179 aa27.3■■□□□ 1.96
PCM1-209ENST00000518930 USP28Q96RU2 1077 aa27.3■■□□□ 1.96
PCM1-209ENST00000518930 RAB34Q9BZG1 259 aa27.3■■□□□ 1.96
PCM1-209ENST00000518930 SENP6Q9GZR1 1112 aaPredicted RBP27.3■■□□□ 1.96
PCM1-209ENST00000518930 STARD7Q9NQZ5 370 aa27.3■■□□□ 1.96
PCM1-209ENST00000518930 F2P00734 622 aa27.29■■□□□ 1.96
PCM1-209ENST00000518930 ARL6IP4Q66PJ3 421 aaKnown RBP27.29■■□□□ 1.96
PCM1-209ENST00000518930 ATL3Q6DD88 541 aa27.29■■□□□ 1.96
PCM1-209ENST00000518930 B3GNT9Q6UX72 402 aa27.29■■□□□ 1.96
PCM1-209ENST00000518930 DTHD1Q6ZMT9 781 aa27.29■■□□□ 1.96
PCM1-209ENST00000518930 TRIM50Q86XT4 487 aa27.29■■□□□ 1.96
PCM1-209ENST00000518930 SMARCAD1Q9H4L7 1026 aa27.29■■□□□ 1.96
PCM1-209ENST00000518930 LGR5O75473 907 aa27.28■■□□□ 1.96
PCM1-209ENST00000518930 COL6A1P12109 1028 aa27.28■■□□□ 1.96
PCM1-209ENST00000518930 TECP42680 631 aa27.28■■□□□ 1.96
PCM1-209ENST00000518930 FXR2P51116 673 aaKnown RBP eCLIP27.28■■□□□ 1.964e-11■■■■■ 32.1
PCM1-209ENST00000518930 CHMP4BP1P59074 171 aa27.28■■□□□ 1.96
PCM1-209ENST00000518930 SPIRE1Q08AE8 756 aa27.28■■□□□ 1.96
PCM1-209ENST00000518930 ZNF302Q9NR11 478 aa27.28■■□□□ 1.96
PCM1-209ENST00000518930 CFAP45Q9UL16 551 aa27.28■■□□□ 1.96
PCM1-209ENST00000518930 SCN10AQ9Y5Y9 1956 aa27.28■■□□□ 1.96
PCM1-209ENST00000518930 H3BRB1 525 aa27.27■■□□□ 1.96
PCM1-209ENST00000518930 MFSD10Q14728 455 aa27.27■■□□□ 1.96
PCM1-209ENST00000518930 STK38Q15208 465 aa27.27■■□□□ 1.96
PCM1-209ENST00000518930 CCDC60Q8IWA6 550 aaPredicted RBP27.27■■□□□ 1.96
PCM1-209ENST00000518930 C16orf70Q9BSU1 422 aa27.27■■□□□ 1.96
PCM1-209ENST00000518930 TUT1Q9H6E5 874 aaKnown RBP27.27■■□□□ 1.96
PCM1-209ENST00000518930 ERAP1Q9NZ08 941 aa27.27■■□□□ 1.96
PCM1-209ENST00000518930 CHMP5Q9NZZ3 219 aa27.27■■□□□ 1.96
PCM1-209ENST00000518930 MYH9P35579 1960 aaKnown RBP27.27■■□□□ 1.96
PCM1-209ENST00000518930 WDR81Q562E7 1941 aa27.27■■□□□ 1.96
PCM1-209ENST00000518930 IGKV6D-21A0A0A0MT36 114 aa27.26■■□□□ 1.95
PCM1-209ENST00000518930 A0A0U1RQG5 324 aaPredicted RBP27.26■■□□□ 1.95
PCM1-209ENST00000518930 POTEMA6NI47 508 aa27.26■■□□□ 1.95
PCM1-209ENST00000518930 NCLP19338 710 aaKnown RBP27.26■■□□□ 1.95
PCM1-209ENST00000518930 NASPP49321 788 aaPredicted RBP27.26■■□□□ 1.95
PCM1-209ENST00000518930 PSEN2P49810 448 aa27.26■■□□□ 1.95
PCM1-209ENST00000518930 STAT5BP51692 787 aa27.26■■□□□ 1.95
PCM1-209ENST00000518930 PSMC6P62333 389 aa27.26■■□□□ 1.95
PCM1-209ENST00000518930 DNM1Q05193 864 aaKnown RBP27.26■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms