RNA–Protein interactions for RNA: ENST00000518882.2

PCDHGA11-202, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDHGA11, Length 2,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-202ENST00000518882 SAMM50Q9Y512 469 aa18.22■□□□□ 0.51
PCDHGA11-202ENST00000518882 GAKO14976 1311 aa18.22■□□□□ 0.51
PCDHGA11-202ENST00000518882 A0A087WUV0 522 aaPredicted RBP18.21■□□□□ 0.51
PCDHGA11-202ENST00000518882 IGKV6D-41A0A0C4DH26 115 aa18.21■□□□□ 0.51
PCDHGA11-202ENST00000518882 POTEB3A0JP26 581 aa18.21■□□□□ 0.51
PCDHGA11-202ENST00000518882 POTECB2RU33 542 aa18.21■□□□□ 0.51
PCDHGA11-202ENST00000518882 CPP00450 1065 aa18.21■□□□□ 0.51
PCDHGA11-202ENST00000518882 SLC16A2P36021 539 aa18.21■□□□□ 0.51
PCDHGA11-202ENST00000518882 GABPAQ06546 454 aa18.21■□□□□ 0.51
PCDHGA11-202ENST00000518882 ZNF543Q08ER8 600 aa18.21■□□□□ 0.51
PCDHGA11-202ENST00000518882 KLHL30Q0D2K2 578 aa18.21■□□□□ 0.51
PCDHGA11-202ENST00000518882 PAK2Q13177 524 aa18.21■□□□□ 0.51
PCDHGA11-202ENST00000518882 HYIQ5T013 277 aa18.21■□□□□ 0.51
PCDHGA11-202ENST00000518882 POTEBQ6S5H4 581 aa18.21■□□□□ 0.51
PCDHGA11-202ENST00000518882 AIPL1Q9NZN9 384 aa18.21■□□□□ 0.51
PCDHGA11-202ENST00000518882 TAF1LQ8IZX4 1826 aa18.21■□□□□ 0.51
PCDHGA11-202ENST00000518882 ACTN1P12814 892 aa18.21■□□□□ 0.51
PCDHGA11-202ENST00000518882 CFAP58Q5T655 872 aa18.21■□□□□ 0.51
PCDHGA11-202ENST00000518882 DNAAF5Q86Y56 855 aa18.21■□□□□ 0.51
PCDHGA11-202ENST00000518882 FAM163AQ96GL9 167 aaPredicted RBP18.21■□□□□ 0.51
PCDHGA11-202ENST00000518882 GOLPH3Q9H4A6 298 aa18.21■□□□□ 0.51
PCDHGA11-202ENST00000518882 SHTN1A0MZ66 631 aa18.2■□□□□ 0.5
PCDHGA11-202ENST00000518882 RAD51CO43502 376 aa18.2■□□□□ 0.5
PCDHGA11-202ENST00000518882 MARCH6O60337 910 aa18.2■□□□□ 0.5
PCDHGA11-202ENST00000518882 PLA2G4BP0C869 781 aa18.2■□□□□ 0.5
PCDHGA11-202ENST00000518882 HERC4Q5GLZ8 1057 aaPredicted RBP18.2■□□□□ 0.5
PCDHGA11-202ENST00000518882 GPBP1Q86WP2 473 aa18.2■□□□□ 0.5
PCDHGA11-202ENST00000518882 MICALL1Q8N3F8 863 aa18.2■□□□□ 0.5
PCDHGA11-202ENST00000518882 CUL5Q93034 780 aa18.2■□□□□ 0.5
PCDHGA11-202ENST00000518882 LUC7LQ9NQ29 371 aaKnown RBP18.2■□□□□ 0.5
PCDHGA11-202ENST00000518882 GNA14O95837 355 aa18.2■□□□□ 0.5
PCDHGA11-202ENST00000518882 CYP11B2P19099 503 aa18.2■□□□□ 0.5
PCDHGA11-202ENST00000518882 LIG3P49916 1009 aa18.2■□□□□ 0.5
PCDHGA11-202ENST00000518882 ADAM9Q13443 819 aa18.2■□□□□ 0.5
PCDHGA11-202ENST00000518882 ASIC2Q16515 512 aa18.2■□□□□ 0.5
PCDHGA11-202ENST00000518882 CDC37Q16543 378 aaPredicted RBP18.2■□□□□ 0.5
PCDHGA11-202ENST00000518882 DPY19L2P1Q6NXN4 242 aa18.2■□□□□ 0.5
PCDHGA11-202ENST00000518882 PPP1R18Q6NYC8 613 aa18.2■□□□□ 0.5
PCDHGA11-202ENST00000518882 CCDC65Q8IXS2 484 aa18.2■□□□□ 0.5
PCDHGA11-202ENST00000518882 MREGQ8N565 214 aa18.2■□□□□ 0.5
PCDHGA11-202ENST00000518882 CNBD1Q8NA66 436 aa18.2■□□□□ 0.5
PCDHGA11-202ENST00000518882 USP38Q8NB14 1042 aa18.2■□□□□ 0.5
PCDHGA11-202ENST00000518882 EMILIN3Q9NT22 766 aa18.2■□□□□ 0.5
PCDHGA11-202ENST00000518882 CCNL1Q9UK58 526 aaPredicted RBP18.2■□□□□ 0.5
PCDHGA11-202ENST00000518882 USP17L10C9JJH3 530 aa18.19■□□□□ 0.5
PCDHGA11-202ENST00000518882 CASP5P51878 434 aa18.19■□□□□ 0.5
PCDHGA11-202ENST00000518882 PTK2Q05397 1052 aa18.19■□□□□ 0.5
PCDHGA11-202ENST00000518882 KCNH2Q12809 1159 aa18.19■□□□□ 0.5
PCDHGA11-202ENST00000518882 ARSHQ5FYA8 562 aa18.19■□□□□ 0.5
PCDHGA11-202ENST00000518882 ZC3H3Q8IXZ2 948 aaKnown RBP18.19■□□□□ 0.5
PCDHGA11-202ENST00000518882 RNPC3Q96LT9 517 aaKnown RBP18.19■□□□□ 0.5
PCDHGA11-202ENST00000518882 NT5C3AQ9H0P0 336 aa18.19■□□□□ 0.5
PCDHGA11-202ENST00000518882 BMP2KQ9NSY1 1161 aaPredicted RBP18.19■□□□□ 0.5
PCDHGA11-202ENST00000518882 DAGLAQ9Y4D2 1042 aa18.19■□□□□ 0.5
PCDHGA11-202ENST00000518882 KDM3AQ9Y4C1 1321 aa18.19■□□□□ 0.5
PCDHGA11-202ENST00000518882 STAT3P40763 770 aa18.19■□□□□ 0.5
PCDHGA11-202ENST00000518882 KCTD19Q17RG1 926 aaPredicted RBP18.19■□□□□ 0.5
PCDHGA11-202ENST00000518882 KLHL7Q8IXQ5 586 aa18.19■□□□□ 0.5
PCDHGA11-202ENST00000518882 DDX4Q9NQI0 724 aaKnown RBP18.19■□□□□ 0.5
PCDHGA11-202ENST00000518882 TMEM59LQ9UK28 342 aa18.19■□□□□ 0.5
PCDHGA11-202ENST00000518882 MED24O75448 989 aa18.18■□□□□ 0.5
PCDHGA11-202ENST00000518882 SLC9A1P19634 815 aa18.18■□□□□ 0.5
PCDHGA11-202ENST00000518882 GUCY1A3Q02108 690 aa18.18■□□□□ 0.5
PCDHGA11-202ENST00000518882 PTPROQ16827 1216 aa18.18■□□□□ 0.5
PCDHGA11-202ENST00000518882 KCTD1Q719H9 257 aa18.18■□□□□ 0.5
PCDHGA11-202ENST00000518882 ZNF571Q7Z3V5 609 aaPredicted RBP18.18■□□□□ 0.5
PCDHGA11-202ENST00000518882 IRF2BP2Q7Z5L9 587 aa18.18■□□□□ 0.5
PCDHGA11-202ENST00000518882 KAT2BQ92831 832 aa18.18■□□□□ 0.5
PCDHGA11-202ENST00000518882 FAM107BQ9H098 131 aa18.18■□□□□ 0.5
PCDHGA11-202ENST00000518882 PSTPIP2Q9H939 334 aa18.18■□□□□ 0.5
PCDHGA11-202ENST00000518882 USP17L15C9J2P7 530 aa18.18■□□□□ 0.5
PCDHGA11-202ENST00000518882 USP17L13C9JLJ4 530 aa18.18■□□□□ 0.5
PCDHGA11-202ENST00000518882 USP17L11C9JVI0 530 aa18.18■□□□□ 0.5
PCDHGA11-202ENST00000518882 USP17L18D6R9N7 530 aa18.18■□□□□ 0.5
PCDHGA11-202ENST00000518882 USP17L22D6RA61 530 aa18.18■□□□□ 0.5
PCDHGA11-202ENST00000518882 USP17L17D6RBQ6 530 aa18.18■□□□□ 0.5
PCDHGA11-202ENST00000518882 USP17L19D6RCP7 530 aa18.18■□□□□ 0.5
PCDHGA11-202ENST00000518882 USP17L20D6RJB6 530 aa18.18■□□□□ 0.5
PCDHGA11-202ENST00000518882 ZEB2O60315 1214 aa18.18■□□□□ 0.5
PCDHGA11-202ENST00000518882 TTLL1O95922 423 aa18.18■□□□□ 0.5
PCDHGA11-202ENST00000518882 MYBP10242 640 aa18.18■□□□□ 0.5
PCDHGA11-202ENST00000518882 USP17L24Q0WX57 530 aa18.18■□□□□ 0.5
PCDHGA11-202ENST00000518882 USP17L6PQ6QN14 398 aa18.18■□□□□ 0.5
PCDHGA11-202ENST00000518882 KDM7AQ6ZMT4 941 aa18.18■□□□□ 0.5
PCDHGA11-202ENST00000518882 ZHX3Q9H4I2 956 aa18.18■□□□□ 0.5
PCDHGA11-202ENST00000518882 POLLQ9UGP5 575 aa18.18■□□□□ 0.5
PCDHGA11-202ENST00000518882 GGA1Q9UJY5 639 aa18.18■□□□□ 0.5
PCDHGA11-202ENST00000518882 ATF5Q9Y2D1 282 aaPredicted RBP18.18■□□□□ 0.5
PCDHGA11-202ENST00000518882 NDUFAB1O14561 156 aa18.17■□□□□ 0.5
PCDHGA11-202ENST00000518882 KCNK3O14649 394 aa18.17■□□□□ 0.5
PCDHGA11-202ENST00000518882 SLURP2P0DP57 97 aa18.17■□□□□ 0.5
PCDHGA11-202ENST00000518882 GCFC2P16383 781 aaKnown RBP18.17■□□□□ 0.5
PCDHGA11-202ENST00000518882 NR2F2P24468 414 aa18.17■□□□□ 0.5
PCDHGA11-202ENST00000518882 RFC4P35249 363 aa18.17■□□□□ 0.5
PCDHGA11-202ENST00000518882 EPS15P42566 896 aa18.17■□□□□ 0.5
PCDHGA11-202ENST00000518882 MRPL12P52815 198 aaKnown RBP18.17■□□□□ 0.5
PCDHGA11-202ENST00000518882 SLC12A3P55017 1021 aa18.17■□□□□ 0.5
PCDHGA11-202ENST00000518882 CD302Q8IX05 232 aa18.17■□□□□ 0.5
PCDHGA11-202ENST00000518882 HDAC9Q9UKV0 1011 aa18.17■□□□□ 0.5
PCDHGA11-202ENST00000518882 FRMD3A2A2Y4 597 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms