RNA–Protein interactions for RNA: ENST00000518877.1

PCM1-208, Transcript of pericentriolar material 1, human

TSL 3

Gene PCM1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCM1-208	ENST00000518877	TTLL11	Q8NHH1	800 aa		4.66	□□□□□ -1.66
PCM1-208	ENST00000518877	PIP4K2C	Q8TBX8	421 aa		4.66	□□□□□ -1.66
PCM1-208	ENST00000518877	NEU4	Q8WWR8	484 aa	Predicted RBP	4.66	□□□□□ -1.66
PCM1-208	ENST00000518877	EDA	Q92838	391 aa		4.66	□□□□□ -1.66
PCM1-208	ENST00000518877	NEIL1	Q96FI4	390 aa	Predicted RBP	4.66	□□□□□ -1.66
PCM1-208	ENST00000518877	IKZF4	Q9H2S9	585 aa		4.66	□□□□□ -1.66
PCM1-208	ENST00000518877	HSPBP1	Q9NZL4	362 aa		4.66	□□□□□ -1.66
PCM1-208	ENST00000518877	ARHGAP20	Q9P2F6	1191 aa		4.66	□□□□□ -1.66
PCM1-208	ENST00000518877	ZBTB7C	A1YPR0	619 aa		4.65	□□□□□ -1.67
PCM1-208	ENST00000518877	NARS	O43776	548 aa	Known RBP	4.65	□□□□□ -1.67
PCM1-208	ENST00000518877	ACO1	P21399	889 aa	Known RBP	4.65	□□□□□ -1.67
PCM1-208	ENST00000518877	RAC3	P60763	192 aa		4.65	□□□□□ -1.67
PCM1-208	ENST00000518877	DPT	Q07507	201 aa		4.65	□□□□□ -1.67
PCM1-208	ENST00000518877	USP10	Q14694	798 aa	Known RBP	4.65	□□□□□ -1.67
PCM1-208	ENST00000518877	TESK1	Q15569	626 aa		4.65	□□□□□ -1.67
PCM1-208	ENST00000518877	AGBL4	Q5VU57	503 aa		4.65	□□□□□ -1.67
PCM1-208	ENST00000518877	C6orf15	Q6UXA7	325 aa	Predicted RBP	4.65	□□□□□ -1.67
PCM1-208	ENST00000518877	C1orf210	Q8IVY1	113 aa		4.65	□□□□□ -1.67
PCM1-208	ENST00000518877	REXO1L1P	Q8IX06	675 aa		4.65	□□□□□ -1.67
PCM1-208	ENST00000518877	TMEM145	Q8NBT3	493 aa		4.65	□□□□□ -1.67
PCM1-208	ENST00000518877	JAM3	Q9BX67	310 aa		4.65	□□□□□ -1.67
PCM1-208	ENST00000518877	ACBD3	Q9H3P7	528 aa		4.65	□□□□□ -1.67
PCM1-208	ENST00000518877	SLC6A20	Q9NP91	592 aa		4.65	□□□□□ -1.67
PCM1-208	ENST00000518877	KIAA1522	Q9P206	1035 aa	Predicted RBP	4.65	□□□□□ -1.67
PCM1-208	ENST00000518877		H0Y858	1186 aa		4.64	□□□□□ -1.67
PCM1-208	ENST00000518877	ENO2	P09104	434 aa	Predicted RBP	4.64	□□□□□ -1.67
PCM1-208	ENST00000518877	ZNF888	P0CJ79	500 aa	Predicted RBP	4.64	□□□□□ -1.67
PCM1-208	ENST00000518877	GFRA1	P56159	465 aa		4.64	□□□□□ -1.67
PCM1-208	ENST00000518877	PAN2	Q504Q3	1202 aa	Known RBP	4.64	□□□□□ -1.67
PCM1-208	ENST00000518877	LARP1B	Q659C4	914 aa	Known RBP	4.64	□□□□□ -1.67
PCM1-208	ENST00000518877	RBM12B	Q8IXT5	1001 aa	Known RBP	4.64	□□□□□ -1.67
PCM1-208	ENST00000518877	CLEC4D	Q8WXI8	215 aa		4.64	□□□□□ -1.67
PCM1-208	ENST00000518877	PLEKHG4B	Q96PX9	1271 aa		4.64	□□□□□ -1.67
PCM1-208	ENST00000518877	TGIF2	Q9GZN2	237 aa		4.64	□□□□□ -1.67
PCM1-208	ENST00000518877	STRIP2	Q9ULQ0	834 aa		4.64	□□□□□ -1.67
PCM1-208	ENST00000518877	PTPN22	Q9Y2R2	807 aa		4.64	□□□□□ -1.67
PCM1-208	ENST00000518877		A0A087X1B8	175 aa		4.63	□□□□□ -1.67
PCM1-208	ENST00000518877	RAD17	O75943	681 aa		4.63	□□□□□ -1.67
PCM1-208	ENST00000518877	FAH	P16930	419 aa		4.63	□□□□□ -1.67
PCM1-208	ENST00000518877	ATF4	P18848	351 aa	Predicted RBP	4.63	□□□□□ -1.67
PCM1-208	ENST00000518877	RRAD	P55042	308 aa		4.63	□□□□□ -1.67
PCM1-208	ENST00000518877	PFKP	Q01813	784 aa		4.63	□□□□□ -1.67
PCM1-208	ENST00000518877	TUSC3	Q13454	348 aa		4.63	□□□□□ -1.67
PCM1-208	ENST00000518877	DENND5A	Q6IQ26	1287 aa		4.63	□□□□□ -1.67
PCM1-208	ENST00000518877	POLN	Q7Z5Q5	900 aa		4.63	□□□□□ -1.67
PCM1-208	ENST00000518877	ZNF575	Q86XF7	245 aa		4.63	□□□□□ -1.67
PCM1-208	ENST00000518877	AMER2	Q8N7J2	671 aa		4.63	□□□□□ -1.67
PCM1-208	ENST00000518877	MRRF	Q96E11	262 aa	Known RBP	4.63	□□□□□ -1.67
PCM1-208	ENST00000518877	FAM89A	Q96GI7	184 aa		4.63	□□□□□ -1.67
PCM1-208	ENST00000518877	OR14A2	Q96R54	314 aa		4.63	□□□□□ -1.67
PCM1-208	ENST00000518877	TACO1	Q9BSH4	297 aa	Known RBP	4.63	□□□□□ -1.67
PCM1-208	ENST00000518877	CARD11	Q9BXL7	1154 aa		4.63	□□□□□ -1.67
PCM1-208	ENST00000518877	KATNBL1	Q9H079	304 aa		4.63	□□□□□ -1.67
PCM1-208	ENST00000518877	KCND1	Q9NSA2	647 aa		4.63	□□□□□ -1.67
PCM1-208	ENST00000518877	NUB1	Q9Y5A7	615 aa		4.63	□□□□□ -1.67
PCM1-208	ENST00000518877	SMAD7	O15105	426 aa	Known RBP	4.62	□□□□□ -1.67
PCM1-208	ENST00000518877	SUSD5	O60279	629 aa		4.62	□□□□□ -1.67
PCM1-208	ENST00000518877	CDC14B	O60729	498 aa		4.62	□□□□□ -1.67
PCM1-208	ENST00000518877	PPFIA2	O75334	1257 aa		4.62	□□□□□ -1.67
PCM1-208	ENST00000518877	LTF	P02788	710 aa		4.62	□□□□□ -1.67
PCM1-208	ENST00000518877	CAPNS1	P04632	268 aa		4.62	□□□□□ -1.67
PCM1-208	ENST00000518877	C1S	P09871	688 aa		4.62	□□□□□ -1.67
PCM1-208	ENST00000518877	INHBC	P55103	352 aa		4.62	□□□□□ -1.67
PCM1-208	ENST00000518877	NANOS3	P60323	173 aa	Known RBP	4.62	□□□□□ -1.67
PCM1-208	ENST00000518877	CD276	Q5ZPR3	534 aa		4.62	□□□□□ -1.67
PCM1-208	ENST00000518877	DNAJC10	Q8IXB1	793 aa		4.62	□□□□□ -1.67
PCM1-208	ENST00000518877	FAM178B	Q8IXR5	827 aa		4.62	□□□□□ -1.67
PCM1-208	ENST00000518877	PPARGC1A	Q9UBK2	798 aa	Known RBP	4.62	□□□□□ -1.67
PCM1-208	ENST00000518877	OAZ3	Q9UMX2	235 aa		4.62	□□□□□ -1.67
PCM1-208	ENST00000518877	INPP5F	Q9Y2H2	1132 aa		4.62	□□□□□ -1.67
PCM1-208	ENST00000518877	UNCX	A6NJT0	531 aa		4.61	□□□□□ -1.67
PCM1-208	ENST00000518877		B2RBV5	119 aa		4.61	□□□□□ -1.67
PCM1-208	ENST00000518877	DDAH1	O94760	285 aa		4.61	□□□□□ -1.67
PCM1-208	ENST00000518877	ADH4	P08319	380 aa		4.61	□□□□□ -1.67
PCM1-208	ENST00000518877	COL6A2	P12110	1019 aa		4.61	□□□□□ -1.67
PCM1-208	ENST00000518877	CR2	P20023	1033 aa		4.61	□□□□□ -1.67
PCM1-208	ENST00000518877	RNF151	Q2KHN1	245 aa		4.61	□□□□□ -1.67
PCM1-208	ENST00000518877	ZMAT1	Q5H9K5	638 aa		4.61	□□□□□ -1.67
PCM1-208	ENST00000518877	OTOP3	Q7RTS5	596 aa		4.61	□□□□□ -1.67
PCM1-208	ENST00000518877	DPYSL5	Q9BPU6	564 aa		4.61	□□□□□ -1.67
PCM1-208	ENST00000518877	C12orf65	Q9H3J6	166 aa	Known RBP	4.61	□□□□□ -1.67
PCM1-208	ENST00000518877	ACTR10	Q9NZ32	417 aa		4.61	□□□□□ -1.67
PCM1-208	ENST00000518877	NPFFR2	Q9Y5X5	522 aa		4.61	□□□□□ -1.67
PCM1-208	ENST00000518877	ESYT3	A0FGR9	886 aa		4.6	□□□□□ -1.67
PCM1-208	ENST00000518877	ZNF839	A8K0R7	811 aa		4.6	□□□□□ -1.67
PCM1-208	ENST00000518877	PLSCR1	O15162	318 aa		4.6	□□□□□ -1.67
PCM1-208	ENST00000518877	GNAT1	P11488	350 aa		4.6	□□□□□ -1.67
PCM1-208	ENST00000518877	SPIRE1	Q08AE8	756 aa		4.6	□□□□□ -1.67
PCM1-208	ENST00000518877	NOLC1	Q14978	699 aa	Known RBP eCLIP	4.6	□□□□□ -1.67
PCM1-208	ENST00000518877	SLC35F1	Q5T1Q4	408 aa		4.6	□□□□□ -1.67
PCM1-208	ENST00000518877		Q6ZSN1	163 aa		4.6	□□□□□ -1.67
PCM1-208	ENST00000518877	USP53	Q70EK8	1073 aa		4.6	□□□□□ -1.67
PCM1-208	ENST00000518877	PNPLA5	Q7Z6Z6	429 aa	Predicted RBP	4.6	□□□□□ -1.67
PCM1-208	ENST00000518877	MICAL1	Q8TDZ2	1067 aa		4.6	□□□□□ -1.67
PCM1-208	ENST00000518877	KCTD13	Q8WZ19	329 aa		4.6	□□□□□ -1.67
PCM1-208	ENST00000518877	C1orf159	Q96HA4	380 aa		4.6	□□□□□ -1.67
PCM1-208	ENST00000518877	CDIP1	Q9H305	208 aa		4.6	□□□□□ -1.67
PCM1-208	ENST00000518877	GPR27	Q9NS67	375 aa		4.6	□□□□□ -1.67
PCM1-208	ENST00000518877	NR2E1	Q9Y466	385 aa		4.6	□□□□□ -1.67
PCM1-208	ENST00000518877	MRVI1	Q9Y6F6	885 aa		4.6	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms