RNA–Protein interactions for RNA: ENST00000518060.5

SPIDR-205, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SPIDR, Length 482 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-205ENST00000518060 COL6A3P12111 3177 aa12.08□□□□□ -0.48
SPIDR-205ENST00000518060 DDX39AO00148 427 aaKnown RBP12.07□□□□□ -0.48
SPIDR-205ENST00000518060 TLL1O43897 1013 aa12.07□□□□□ -0.48
SPIDR-205ENST00000518060 WDR5P61964 334 aaKnown RBP12.07□□□□□ -0.48
SPIDR-205ENST00000518060 IGBP1P78318 339 aa12.07□□□□□ -0.48
SPIDR-205ENST00000518060 RBL2Q08999 1139 aa12.07□□□□□ -0.48
SPIDR-205ENST00000518060 PPFIA1Q13136 1202 aa12.07□□□□□ -0.48
SPIDR-205ENST00000518060 TRIM71Q2Q1W2 868 aaKnown RBP12.07□□□□□ -0.48
SPIDR-205ENST00000518060 TMCO2Q7Z6W1 182 aaPredicted RBP12.07□□□□□ -0.48
SPIDR-205ENST00000518060 CYP2W1Q8TAV3 490 aa12.07□□□□□ -0.48
SPIDR-205ENST00000518060 LMBR1Q8WVP7 490 aa12.07□□□□□ -0.48
SPIDR-205ENST00000518060 MXRA8Q9BRK3 442 aa12.07□□□□□ -0.48
SPIDR-205ENST00000518060 UPF3BQ9BZI7 483 aaKnown RBP12.07□□□□□ -0.48
SPIDR-205ENST00000518060 RNPEPQ9H4A4 650 aa12.07□□□□□ -0.48
SPIDR-205ENST00000518060 AZI2Q9H6S1 392 aa12.07□□□□□ -0.48
SPIDR-205ENST00000518060 NCOA5Q9HCD5 579 aaKnown RBP12.07□□□□□ -0.48
SPIDR-205ENST00000518060 C6orf50Q9HD87 102 aa12.07□□□□□ -0.48
SPIDR-205ENST00000518060 KCNH7Q9NS40 1196 aa12.07□□□□□ -0.48
SPIDR-205ENST00000518060 ERAP1Q9NZ08 941 aa12.07□□□□□ -0.48
SPIDR-205ENST00000518060 TRPC6Q9Y210 931 aa12.07□□□□□ -0.48
SPIDR-205ENST00000518060 CYP46A1Q9Y6A2 500 aa12.07□□□□□ -0.48
SPIDR-205ENST00000518060 EMSYQ7Z589 1322 aa12.07□□□□□ -0.48
SPIDR-205ENST00000518060 SCN5AQ14524 2016 aa12.06□□□□□ -0.48
SPIDR-205ENST00000518060 CPLX1O14810 134 aa12.06□□□□□ -0.48
SPIDR-205ENST00000518060 LGR5O75473 907 aa12.06□□□□□ -0.48
SPIDR-205ENST00000518060 CENPBP07199 599 aaPredicted RBP12.06□□□□□ -0.48
SPIDR-205ENST00000518060 SREBF1P36956 1147 aa12.06□□□□□ -0.48
SPIDR-205ENST00000518060 DEFB103AP81534 67 aa12.06□□□□□ -0.48
SPIDR-205ENST00000518060 IKBKEQ14164 716 aa12.06□□□□□ -0.48
SPIDR-205ENST00000518060 CCDC85BQ15834 202 aaPredicted RBP12.06□□□□□ -0.48
SPIDR-205ENST00000518060 CEP55Q53EZ4 464 aa12.06□□□□□ -0.48
SPIDR-205ENST00000518060 RUFY3Q7L099 469 aa12.06□□□□□ -0.48
SPIDR-205ENST00000518060 TRIM22Q8IYM9 498 aa12.06□□□□□ -0.48
SPIDR-205ENST00000518060 REXO1Q8N1G1 1221 aaKnown RBP12.06□□□□□ -0.48
SPIDR-205ENST00000518060 PHOSPHO2Q8TCD6 241 aa12.06□□□□□ -0.48
SPIDR-205ENST00000518060 ARNTL2Q8WYA1 636 aa12.06□□□□□ -0.48
SPIDR-205ENST00000518060 UIMC1Q96RL1 719 aa12.06□□□□□ -0.48
SPIDR-205ENST00000518060 LARP6Q9BRS8 491 aaKnown RBP12.06□□□□□ -0.48
SPIDR-205ENST00000518060 SLC9A2Q9UBY0 812 aa12.06□□□□□ -0.48
SPIDR-205ENST00000518060 TCEAL9Q9UHQ7 104 aa12.06□□□□□ -0.48
SPIDR-205ENST00000518060 ABHD14A-ACY1A0A1B0GW23 586 aa12.05□□□□□ -0.48
SPIDR-205ENST00000518060 GSTTP1A0A1W2PQM5 241 aa12.05□□□□□ -0.48
SPIDR-205ENST00000518060 BACH1O14867 736 aa12.05□□□□□ -0.48
SPIDR-205ENST00000518060 MAFGO15525 162 aa12.05□□□□□ -0.48
SPIDR-205ENST00000518060 PRPF3O43395 683 aaKnown RBP12.05□□□□□ -0.48
SPIDR-205ENST00000518060 EFCAB14O75071 495 aa12.05□□□□□ -0.48
SPIDR-205ENST00000518060 CXCL10P02778 98 aa12.05□□□□□ -0.48
SPIDR-205ENST00000518060 ARP10275 920 aa12.05□□□□□ -0.48
SPIDR-205ENST00000518060 ACTR2P61160 394 aa12.05□□□□□ -0.48
SPIDR-205ENST00000518060 STK3Q13188 491 aa12.05□□□□□ -0.48
SPIDR-205ENST00000518060 MBTPS1Q14703 1052 aa12.05□□□□□ -0.48
SPIDR-205ENST00000518060 GPNMBQ14956 572 aa12.05□□□□□ -0.48
SPIDR-205ENST00000518060 GRIK4Q16099 956 aa12.05□□□□□ -0.48
SPIDR-205ENST00000518060 TCTN1Q2MV58 587 aa12.05□□□□□ -0.48
SPIDR-205ENST00000518060 TRAF7Q6Q0C0 670 aa12.05□□□□□ -0.48
SPIDR-205ENST00000518060 RSPH3Q86UC2 560 aa12.05□□□□□ -0.48
SPIDR-205ENST00000518060 PLA2G4DQ86XP0 818 aa12.05□□□□□ -0.48
SPIDR-205ENST00000518060 CCDC148Q8NFR7 591 aa12.05□□□□□ -0.48
SPIDR-205ENST00000518060 SEPT8Q92599 483 aa12.05□□□□□ -0.48
SPIDR-205ENST00000518060 SMARCAD1Q9H4L7 1026 aa12.05□□□□□ -0.48
SPIDR-205ENST00000518060 AGO4Q9HCK5 861 aaKnown RBP12.05□□□□□ -0.48
SPIDR-205ENST00000518060 PDRG1Q9NUG6 133 aa12.05□□□□□ -0.48
SPIDR-205ENST00000518060 VPS54Q9P1Q0 977 aa12.05□□□□□ -0.48
SPIDR-205ENST00000518060 TUBE1Q9UJT0 475 aa12.05□□□□□ -0.48
SPIDR-205ENST00000518060 MYH7BA7E2Y1 1941 aa12.05□□□□□ -0.48
SPIDR-205ENST00000518060 NRCAMQ92823 1304 aa12.05□□□□□ -0.48
SPIDR-205ENST00000518060 CAND2O75155 1236 aa12.04□□□□□ -0.48
SPIDR-205ENST00000518060 AMHP03971 560 aa12.04□□□□□ -0.48
SPIDR-205ENST00000518060 GNA11P29992 359 aa12.04□□□□□ -0.48
SPIDR-205ENST00000518060 PDIA3P30101 505 aaKnown RBP12.04□□□□□ -0.48
SPIDR-205ENST00000518060 HOXC8P31273 242 aa12.04□□□□□ -0.48
SPIDR-205ENST00000518060 SSRP1Q08945 709 aaKnown RBP12.04□□□□□ -0.48
SPIDR-205ENST00000518060 ITGB3BPQ13352 177 aaPredicted RBP12.04□□□□□ -0.48
SPIDR-205ENST00000518060 SKIV2LQ15477 1246 aaKnown RBP12.04□□□□□ -0.48
SPIDR-205ENST00000518060 CPLX2Q6PUV4 134 aaKnown RBP12.04□□□□□ -0.48
SPIDR-205ENST00000518060 RUFY4Q6ZNE9 571 aa12.04□□□□□ -0.48
SPIDR-205ENST00000518060 TEX2Q8IWB9 1127 aa12.04□□□□□ -0.48
SPIDR-205ENST00000518060 MYOCDQ8IZQ8 938 aa12.04□□□□□ -0.48
SPIDR-205ENST00000518060 USP38Q8NB14 1042 aa12.04□□□□□ -0.48
SPIDR-205ENST00000518060 DBF4BQ8NFT6 615 aa12.04□□□□□ -0.48
SPIDR-205ENST00000518060 BICD2Q8TD16 824 aa12.04□□□□□ -0.48
SPIDR-205ENST00000518060 RASGRP4Q8TDF6 673 aa12.04□□□□□ -0.48
SPIDR-205ENST00000518060 FAM49AQ9H0Q0 323 aaPredicted RBP12.04□□□□□ -0.48
SPIDR-205ENST00000518060 ZSWIM6Q9HCJ5 1215 aa12.04□□□□□ -0.48
SPIDR-205ENST00000518060 MTUS1Q9ULD2 1270 aa12.04□□□□□ -0.48
SPIDR-205ENST00000518060 CUL9Q8IWT3 2517 aa12.04□□□□□ -0.48
SPIDR-205ENST00000518060 NID2Q14112 1375 aa12.04□□□□□ -0.48
SPIDR-205ENST00000518060 ESYT2A0FGR8 921 aa12.03□□□□□ -0.48
SPIDR-205ENST00000518060 RFXAPO00287 272 aa12.03□□□□□ -0.48
SPIDR-205ENST00000518060 EPB41L2O43491 1005 aaKnown RBP12.03□□□□□ -0.48
SPIDR-205ENST00000518060 GTPBP6O43824 516 aaPredicted RBP12.03□□□□□ -0.48
SPIDR-205ENST00000518060 GHRP10912 638 aa12.03□□□□□ -0.48
SPIDR-205ENST00000518060 IFNAR1P17181 557 aa12.03□□□□□ -0.48
SPIDR-205ENST00000518060 CLK2P49760 499 aaKnown RBP12.03□□□□□ -0.48
SPIDR-205ENST00000518060 NLRP5P59047 1200 aa12.03□□□□□ -0.48
SPIDR-205ENST00000518060 TOB2Q14106 344 aaPredicted RBP12.03□□□□□ -0.48
SPIDR-205ENST00000518060 ADGRE1Q14246 886 aa12.03□□□□□ -0.48
SPIDR-205ENST00000518060 PKN1Q16512 942 aa12.03□□□□□ -0.48
SPIDR-205ENST00000518060 MCTP2Q6DN12 878 aa12.03□□□□□ -0.48
SPIDR-205ENST00000518060 TAF2Q6P1X5 1199 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms