RNA–Protein interactions for RNA: ENST00000517838.5

PVT1-206, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 518 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-206ENST00000517838 BFSP2Q13515 415 aa8.52□□□□□ -1.05
PVT1-206ENST00000517838 TOB2Q14106 344 aaPredicted RBP8.52□□□□□ -1.05
PVT1-206ENST00000517838 AMHR2Q16671 573 aa8.52□□□□□ -1.05
PVT1-206ENST00000517838 PTCRAQ6ISU1 281 aaPredicted RBP8.52□□□□□ -1.05
PVT1-206ENST00000517838 RCSD1Q6JBY9 416 aa8.52□□□□□ -1.05
PVT1-206ENST00000517838 RASGRP2Q7LDG7 609 aa8.52□□□□□ -1.05
PVT1-206ENST00000517838 OR6J1Q8NGC5 347 aa8.52□□□□□ -1.05
PVT1-206ENST00000517838 ANKS1AQ92625 1134 aa8.52□□□□□ -1.05
PVT1-206ENST00000517838 COPS5Q92905 334 aa8.52□□□□□ -1.05
PVT1-206ENST00000517838 GTF3C6Q969F1 213 aa8.52□□□□□ -1.05
PVT1-206ENST00000517838 CHAMP1Q96JM3 812 aa8.52□□□□□ -1.05
PVT1-206ENST00000517838 SNX27Q96L92 541 aa8.52□□□□□ -1.05
PVT1-206ENST00000517838 RAD9AQ99638 391 aa8.52□□□□□ -1.05
PVT1-206ENST00000517838 GRPEL1Q9HAV7 217 aa8.52□□□□□ -1.05
PVT1-206ENST00000517838 ZNF287Q9HBT7 754 aa8.52□□□□□ -1.05
PVT1-206ENST00000517838 PLIN4Q96Q06 1357 aa8.51□□□□□ -1.05
PVT1-206ENST00000517838 GOLGA8BA8MQT2 603 aa8.51□□□□□ -1.05
PVT1-206ENST00000517838 PATL2C9JE40 543 aaKnown RBP8.51□□□□□ -1.05
PVT1-206ENST00000517838 NFIBO00712 420 aa8.51□□□□□ -1.05
PVT1-206ENST00000517838 KPNA6O60684 536 aa8.51□□□□□ -1.05
PVT1-206ENST00000517838 NBNO60934 754 aa8.51□□□□□ -1.05
PVT1-206ENST00000517838 DTNBO60941 627 aa8.51□□□□□ -1.05
PVT1-206ENST00000517838 GJB5O95377 273 aa8.51□□□□□ -1.05
PVT1-206ENST00000517838 CXCL10P02778 98 aa8.51□□□□□ -1.05
PVT1-206ENST00000517838 TSPY3P0CV98 308 aa8.51□□□□□ -1.05
PVT1-206ENST00000517838 TSPY8P0CW00 308 aa8.51□□□□□ -1.05
PVT1-206ENST00000517838 CLCN1P35523 988 aa8.51□□□□□ -1.05
PVT1-206ENST00000517838 TDO2P48775 406 aa8.51□□□□□ -1.05
PVT1-206ENST00000517838 APOBRQ0VD83 1088 aa8.51□□□□□ -1.05
PVT1-206ENST00000517838 PTGISQ16647 500 aa8.51□□□□□ -1.05
PVT1-206ENST00000517838 STOX1Q6ZVD7 989 aa8.51□□□□□ -1.05
PVT1-206ENST00000517838 IFNL3Q8IZI9 196 aa8.51□□□□□ -1.05
PVT1-206ENST00000517838 NEK9Q8TD19 979 aa8.51□□□□□ -1.05
PVT1-206ENST00000517838 DHX38Q92620 1227 aaKnown RBP8.51□□□□□ -1.05
PVT1-206ENST00000517838 TGS1Q96RS0 853 aaKnown RBP8.51□□□□□ -1.05
PVT1-206ENST00000517838 GDPD2Q9HCC8 539 aa8.51□□□□□ -1.05
PVT1-206ENST00000517838 GPCPD1Q9NPB8 672 aa8.51□□□□□ -1.05
PVT1-206ENST00000517838 IL17RBQ9NRM6 502 aa8.51□□□□□ -1.05
PVT1-206ENST00000517838 ADD3Q9UEY8 706 aaKnown RBP8.51□□□□□ -1.05
PVT1-206ENST00000517838 CCPG1Q9ULG6 757 aa8.51□□□□□ -1.05
PVT1-206ENST00000517838 NOD1Q9Y239 953 aa8.51□□□□□ -1.05
PVT1-206ENST00000517838 PCDHB3Q9Y5E6 796 aa8.51□□□□□ -1.05
PVT1-206ENST00000517838 LRRC37A2A6NM11 1700 aa8.51□□□□□ -1.05
PVT1-206ENST00000517838 LOC102724159A0A0B4J2E5 919 aa8.5□□□□□ -1.05
PVT1-206ENST00000517838 FSD2A1L4K1 749 aa8.5□□□□□ -1.05
PVT1-206ENST00000517838 GOLGA6L4A6NEF3 574 aa8.5□□□□□ -1.05
PVT1-206ENST00000517838 H3BQ06 376 aaPredicted RBP8.5□□□□□ -1.05
PVT1-206ENST00000517838 NKRFO15226 690 aaKnown RBP eCLIP8.5□□□□□ -1.05
PVT1-206ENST00000517838 DCXO43602 365 aa8.5□□□□□ -1.05
PVT1-206ENST00000517838 PRC1O43663 620 aa8.5□□□□□ -1.05
PVT1-206ENST00000517838 NMT2O60551 498 aa8.5□□□□□ -1.05
PVT1-206ENST00000517838 TXNP10599 105 aaKnown RBP8.5□□□□□ -1.05
PVT1-206ENST00000517838 CD46P15529 392 aa8.5□□□□□ -1.05
PVT1-206ENST00000517838 SELPP16109 830 aa8.5□□□□□ -1.05
PVT1-206ENST00000517838 GNAT2P19087 354 aa8.5□□□□□ -1.05
PVT1-206ENST00000517838 EDNRBP24530 442 aa8.5□□□□□ -1.05
PVT1-206ENST00000517838 MCM5P33992 734 aa8.5□□□□□ -1.05
PVT1-206ENST00000517838 GCGRP47871 477 aa8.5□□□□□ -1.05
PVT1-206ENST00000517838 CHMP4BP1P59074 171 aa8.5□□□□□ -1.05
PVT1-206ENST00000517838 KRT85P78386 507 aa8.5□□□□□ -1.05
PVT1-206ENST00000517838 HMGN5P82970 282 aaKnown RBP8.5□□□□□ -1.05
PVT1-206ENST00000517838 RBL2Q08999 1139 aa8.5□□□□□ -1.05
PVT1-206ENST00000517838 PWP2Q15269 919 aaKnown RBP8.5□□□□□ -1.05
PVT1-206ENST00000517838 ZSCAN23Q3MJ62 389 aa8.5□□□□□ -1.05
PVT1-206ENST00000517838 BRDTQ58F21 947 aaPredicted RBP8.5□□□□□ -1.05
PVT1-206ENST00000517838 TTBK2Q6IQ55 1244 aa8.5□□□□□ -1.05
PVT1-206ENST00000517838 GDF6Q6KF10 455 aaPredicted RBP8.5□□□□□ -1.05
PVT1-206ENST00000517838 CNKSR3Q6P9H4 555 aa8.5□□□□□ -1.05
PVT1-206ENST00000517838 BLOC1S3Q6QNY0 202 aa8.5□□□□□ -1.05
PVT1-206ENST00000517838 SLC30A10Q6XR72 485 aa8.5□□□□□ -1.05
PVT1-206ENST00000517838 RDH13Q8NBN7 331 aa8.5□□□□□ -1.05
PVT1-206ENST00000517838 NCOA7Q8NI08 942 aa8.5□□□□□ -1.05
PVT1-206ENST00000517838 CAGE1Q8TC20 777 aa8.5□□□□□ -1.05
PVT1-206ENST00000517838 AFAP1L1Q8TED9 768 aa8.5□□□□□ -1.05
PVT1-206ENST00000517838 CLEC4DQ8WXI8 215 aa8.5□□□□□ -1.05
PVT1-206ENST00000517838 ZNF516Q92618 1163 aa8.5□□□□□ -1.05
PVT1-206ENST00000517838 KAT2BQ92831 832 aa8.5□□□□□ -1.05
PVT1-206ENST00000517838 C17orf80Q9BSJ5 609 aa8.5□□□□□ -1.05
PVT1-206ENST00000517838 REPIN1Q9BWE0 567 aaKnown RBP8.5□□□□□ -1.05
PVT1-206ENST00000517838 NACAP1Q9BZK3 213 aa8.5□□□□□ -1.05
PVT1-206ENST00000517838 NAPBQ9H115 298 aa8.5□□□□□ -1.05
PVT1-206ENST00000517838 KCNH6Q9H252 994 aa8.5□□□□□ -1.05
PVT1-206ENST00000517838 RANBP17Q9H2T7 1088 aaKnown RBP8.5□□□□□ -1.05
PVT1-206ENST00000517838 INCENPQ9NQS7 918 aa8.5□□□□□ -1.05
PVT1-206ENST00000517838 TOMM22Q9NS69 142 aa8.5□□□□□ -1.05
PVT1-206ENST00000517838 MTMR6Q9Y217 621 aa8.5□□□□□ -1.05
PVT1-206ENST00000517838 GREB1LQ9C091 1923 aaPredicted RBP8.5□□□□□ -1.05
PVT1-206ENST00000517838 KLF18A0A0U1RQI7 1052 aa8.49□□□□□ -1.05
PVT1-206ENST00000517838 ABHD14A-ACY1A0A1B0GW23 586 aa8.49□□□□□ -1.05
PVT1-206ENST00000517838 PTPDC1A2A3K4 754 aa8.49□□□□□ -1.05
PVT1-206ENST00000517838 CPLX1O14810 134 aa8.49□□□□□ -1.05
PVT1-206ENST00000517838 JAK2O60674 1132 aa8.49□□□□□ -1.05
PVT1-206ENST00000517838 PFKFB2O60825 505 aa8.49□□□□□ -1.05
PVT1-206ENST00000517838 ARIH2O95376 493 aa8.49□□□□□ -1.05
PVT1-206ENST00000517838 CKBP12277 381 aa8.49□□□□□ -1.05
PVT1-206ENST00000517838 CALML3P27482 149 aa8.49□□□□□ -1.05
PVT1-206ENST00000517838 SLC16A2P36021 539 aa8.49□□□□□ -1.05
PVT1-206ENST00000517838 COPS2P61201 443 aa8.49□□□□□ -1.05
PVT1-206ENST00000517838 CCT2P78371 535 aaKnown RBP8.49□□□□□ -1.05
PVT1-206ENST00000517838 ZP2Q05996 745 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms