RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 TTI2Q6NXR4 508 aa7.26□□□□□ -1.25
CPNE3-203ENST00000517490 SYN2Q92777 582 aaPredicted RBP7.26□□□□□ -1.25
CPNE3-203ENST00000517490 STMN2Q93045 179 aa7.26□□□□□ -1.25
CPNE3-203ENST00000517490 SETDB2Q96T68 719 aa7.26□□□□□ -1.25
CPNE3-203ENST00000517490 PRM3Q9NNZ6 103 aa7.26□□□□□ -1.25
CPNE3-203ENST00000517490 DONSONQ9NYP3 566 aa7.26□□□□□ -1.25
CPNE3-203ENST00000517490 SMARCAL1Q9NZC9 954 aa7.26□□□□□ -1.25
CPNE3-203ENST00000517490 ANAPC4Q9UJX5 808 aa7.26□□□□□ -1.25
CPNE3-203ENST00000517490 ASAP1Q9ULH1 1129 aa7.26□□□□□ -1.25
CPNE3-203ENST00000517490 CAPN6Q9Y6Q1 641 aa7.26□□□□□ -1.25
CPNE3-203ENST00000517490 DUSP10Q9Y6W6 482 aa7.26□□□□□ -1.25
CPNE3-203ENST00000517490 ABCB11O95342 1321 aa7.25□□□□□ -1.25
CPNE3-203ENST00000517490 A0A087X0B3 334 aa7.25□□□□□ -1.25
CPNE3-203ENST00000517490 RASGRF2O14827 1237 aa7.25□□□□□ -1.25
CPNE3-203ENST00000517490 GCNT3O95395 438 aa7.25□□□□□ -1.25
CPNE3-203ENST00000517490 GAS8O95995 478 aa7.25□□□□□ -1.25
CPNE3-203ENST00000517490 TNFRSF8P28908 595 aa7.25□□□□□ -1.25
CPNE3-203ENST00000517490 KLK7P49862 253 aa7.25□□□□□ -1.25
CPNE3-203ENST00000517490 NAB2Q15742 525 aa7.25□□□□□ -1.25
CPNE3-203ENST00000517490 HLFQ16534 295 aa7.25□□□□□ -1.25
CPNE3-203ENST00000517490 ELAC2Q9BQ52 826 aaKnown RBP7.25□□□□□ -1.25
CPNE3-203ENST00000517490 CARD10Q9BWT7 1032 aa7.25□□□□□ -1.25
CPNE3-203ENST00000517490 JAG2Q9Y219 1238 aa7.25□□□□□ -1.25
CPNE3-203ENST00000517490 CHD2O14647 1828 aaKnown RBP7.25□□□□□ -1.25
CPNE3-203ENST00000517490 CNTNAP5Q8WYK1 1306 aa7.25□□□□□ -1.25
CPNE3-203ENST00000517490 SRRM3A6NNA2 597 aaPredicted RBP7.25□□□□□ -1.25
CPNE3-203ENST00000517490 SHOX2O60902 331 aaPredicted RBP7.25□□□□□ -1.25
CPNE3-203ENST00000517490 STK4Q13043 487 aa7.25□□□□□ -1.25
CPNE3-203ENST00000517490 RBBP5Q15291 538 aaKnown RBP7.25□□□□□ -1.25
CPNE3-203ENST00000517490 EZH2Q15910 746 aaKnown RBP7.25□□□□□ -1.25
CPNE3-203ENST00000517490 CCDC174Q6PII3 467 aa7.25□□□□□ -1.25
CPNE3-203ENST00000517490 ZNF365Q70YC5 407 aa7.25□□□□□ -1.25
CPNE3-203ENST00000517490 SYNE4Q8N205 404 aa7.25□□□□□ -1.25
CPNE3-203ENST00000517490 TGFBRAP1Q8WUH2 860 aa7.25□□□□□ -1.25
CPNE3-203ENST00000517490 CALR3Q96L12 384 aaKnown RBP7.25□□□□□ -1.25
CPNE3-203ENST00000517490 SPZ1Q9BXG8 430 aa7.25□□□□□ -1.25
CPNE3-203ENST00000517490 EMILIN3Q9NT22 766 aa7.25□□□□□ -1.25
CPNE3-203ENST00000517490 TFCP2L1Q9NZI6 479 aa7.25□□□□□ -1.25
CPNE3-203ENST00000517490 PCDHB13Q9Y5F0 798 aa7.25□□□□□ -1.25
CPNE3-203ENST00000517490 IKBKGQ9Y6K9 419 aa7.25□□□□□ -1.25
CPNE3-203ENST00000517490 ATXN2Q99700 1313 aaKnown RBP7.25□□□□□ -1.25
CPNE3-203ENST00000517490 PRPF6O94906 941 aaKnown RBP7.25□□□□□ -1.25
CPNE3-203ENST00000517490 FGGP02679 453 aa7.25□□□□□ -1.25
CPNE3-203ENST00000517490 BYSLQ13895 437 aaKnown RBP7.25□□□□□ -1.25
CPNE3-203ENST00000517490 GRM4Q14833 912 aa7.25□□□□□ -1.25
CPNE3-203ENST00000517490 CYB5D1Q6P9G0 228 aa7.25□□□□□ -1.25
CPNE3-203ENST00000517490 ADAT2Q7Z6V5 191 aaKnown RBP7.25□□□□□ -1.25
CPNE3-203ENST00000517490 CREG2Q8IUH2 290 aa7.25□□□□□ -1.25
CPNE3-203ENST00000517490 USP38Q8NB14 1042 aa7.25□□□□□ -1.25
CPNE3-203ENST00000517490 RAD54LQ92698 747 aa7.25□□□□□ -1.25
CPNE3-203ENST00000517490 DDX47Q9H0S4 455 aaKnown RBP7.25□□□□□ -1.25
CPNE3-203ENST00000517490 CD248Q9HCU0 757 aa7.25□□□□□ -1.25
CPNE3-203ENST00000517490 TYW1Q9NV66 732 aaKnown RBP7.25□□□□□ -1.25
CPNE3-203ENST00000517490 BARHL2Q9NY43 387 aa7.25□□□□□ -1.25
CPNE3-203ENST00000517490 ZBTB1Q9Y2K1 713 aa7.25□□□□□ -1.25
CPNE3-203ENST00000517490 NOC2LQ9Y3T9 749 aaKnown RBP7.25□□□□□ -1.25
CPNE3-203ENST00000517490 LRRD1A4D1F6 860 aa7.24□□□□□ -1.25
CPNE3-203ENST00000517490 RAD51CO43502 376 aa7.24□□□□□ -1.25
CPNE3-203ENST00000517490 ANXA13P27216 316 aa7.24□□□□□ -1.25
CPNE3-203ENST00000517490 PEX19P40855 299 aa7.24□□□□□ -1.25
CPNE3-203ENST00000517490 MAPKAPK5Q8IW41 473 aa7.24□□□□□ -1.25
CPNE3-203ENST00000517490 SLFN12Q8IYM2 578 aa7.24□□□□□ -1.25
CPNE3-203ENST00000517490 PRPF38AQ8NAV1 312 aaKnown RBP7.24□□□□□ -1.25
CPNE3-203ENST00000517490 UHMK1Q8TAS1 419 aaKnown RBP7.24□□□□□ -1.25
CPNE3-203ENST00000517490 TMBIM4Q9HC24 238 aa7.24□□□□□ -1.25
CPNE3-203ENST00000517490 TXLNGQ9NUQ3 528 aa7.24□□□□□ -1.25
CPNE3-203ENST00000517490 GGA2Q9UJY4 613 aa7.24□□□□□ -1.25
CPNE3-203ENST00000517490 PCDHA6Q9UN73 950 aa7.24□□□□□ -1.25
CPNE3-203ENST00000517490 PCDHA8Q9Y5H6 950 aa7.24□□□□□ -1.25
CPNE3-203ENST00000517490 FAM187AA6NFU0 413 aa7.24□□□□□ -1.25
CPNE3-203ENST00000517490 PODXLO00592 558 aa7.24□□□□□ -1.25
CPNE3-203ENST00000517490 HGSO14964 777 aaPredicted RBP7.24□□□□□ -1.25
CPNE3-203ENST00000517490 FECHP22830 423 aa7.24□□□□□ -1.25
CPNE3-203ENST00000517490 CTNNA2P26232 953 aa7.24□□□□□ -1.25
CPNE3-203ENST00000517490 MXRA7P84157 204 aa7.24□□□□□ -1.25
CPNE3-203ENST00000517490 GRK7Q8WTQ7 553 aa7.24□□□□□ -1.25
CPNE3-203ENST00000517490 CASKIN2Q8WXE0 1202 aa7.24□□□□□ -1.25
CPNE3-203ENST00000517490 RPGRQ92834 1020 aaKnown RBP7.24□□□□□ -1.25
CPNE3-203ENST00000517490 DDX17Q92841 729 aaKnown RBP7.24□□□□□ -1.25
CPNE3-203ENST00000517490 KIFAP3Q92845 792 aa7.24□□□□□ -1.25
CPNE3-203ENST00000517490 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.24□□□□□ -1.25
CPNE3-203ENST00000517490 PACSIN2Q9UNF0 486 aaPredicted RBP7.24□□□□□ -1.25
CPNE3-203ENST00000517490 KIAA1024Q9UPX6 916 aa7.24□□□□□ -1.25
CPNE3-203ENST00000517490 CD2APQ9Y5K6 639 aa7.24□□□□□ -1.25
CPNE3-203ENST00000517490 HHATQ5VTY9 493 aa7.24□□□□□ -1.25
CPNE3-203ENST00000517490 TPTE2Q6XPS3 522 aa7.24□□□□□ -1.25
CPNE3-203ENST00000517490 VTI1AQ96AJ9 217 aa7.24□□□□□ -1.25
CPNE3-203ENST00000517490 PLEKP08567 350 aaPredicted RBP7.24□□□□□ -1.25
CPNE3-203ENST00000517490 PMS2P54278 862 aa7.24□□□□□ -1.25
CPNE3-203ENST00000517490 IL9RQ01113 521 aa7.24□□□□□ -1.25
CPNE3-203ENST00000517490 TROAPQ12815 778 aa7.24□□□□□ -1.25
CPNE3-203ENST00000517490 MYO1EQ12965 1108 aa7.24□□□□□ -1.25
CPNE3-203ENST00000517490 CRYMQ14894 314 aa7.24□□□□□ -1.25
CPNE3-203ENST00000517490 TAF11Q15544 211 aa7.24□□□□□ -1.25
CPNE3-203ENST00000517490 TRIM68Q6AZZ1 485 aa7.24□□□□□ -1.25
CPNE3-203ENST00000517490 ARHGEF18Q6ZSZ5 1173 aa7.24□□□□□ -1.25
CPNE3-203ENST00000517490 ARHGAP24Q8N264 748 aa7.24□□□□□ -1.25
CPNE3-203ENST00000517490 SAAL1Q96ER3 474 aa7.24□□□□□ -1.25
CPNE3-203ENST00000517490 XPO6Q96QU8 1125 aaKnown RBP7.24□□□□□ -1.25
CPNE3-203ENST00000517490 KBTBD4Q9NVX7 518 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms