RNA–Protein interactions for RNA: ENST00000517352.1

TNFRSF11B-202, Transcript of TNF receptor superfamily member 11b, humanhuman

TSL 1 (best)

Gene TNFRSF11B, Length 1,144 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11B-202ENST00000517352 RPLP2P05387 115 aaKnown RBP8.46□□□□□ -1.06
TNFRSF11B-202ENST00000517352 CALM1P0DP23 149 aa8.46□□□□□ -1.06
TNFRSF11B-202ENST00000517352 CALM2P0DP24 149 aa8.46□□□□□ -1.06
TNFRSF11B-202ENST00000517352 CALM3P0DP25 149 aa8.46□□□□□ -1.06
TNFRSF11B-202ENST00000517352 MARK3P27448 753 aa8.46□□□□□ -1.06
TNFRSF11B-202ENST00000517352 TCF7P36402 384 aaPredicted RBP8.46□□□□□ -1.06
TNFRSF11B-202ENST00000517352 ZNF76P36508 570 aa8.46□□□□□ -1.06
TNFRSF11B-202ENST00000517352 SP2Q02086 613 aa8.46□□□□□ -1.06
TNFRSF11B-202ENST00000517352 PLEKHG4Q58EX7 1191 aa8.46□□□□□ -1.06
TNFRSF11B-202ENST00000517352 IER5Q5VY09 327 aa8.46□□□□□ -1.06
TNFRSF11B-202ENST00000517352 CYB5R4Q7L1T6 521 aa8.46□□□□□ -1.06
TNFRSF11B-202ENST00000517352 TMEM192Q8IY95 271 aa8.46□□□□□ -1.06
TNFRSF11B-202ENST00000517352 CCDC82Q8N4S0 544 aa8.46□□□□□ -1.06
TNFRSF11B-202ENST00000517352 EXOC6Q8TAG9 804 aa8.46□□□□□ -1.06
TNFRSF11B-202ENST00000517352 MICAL1Q8TDZ2 1067 aa8.46□□□□□ -1.06
TNFRSF11B-202ENST00000517352 TOP1MTQ969P6 601 aa8.46□□□□□ -1.06
TNFRSF11B-202ENST00000517352 VWCEQ96DN2 955 aa8.46□□□□□ -1.06
TNFRSF11B-202ENST00000517352 KIF12Q96FN5 646 aa8.46□□□□□ -1.06
TNFRSF11B-202ENST00000517352 SDF4Q9BRK5 362 aa8.46□□□□□ -1.06
TNFRSF11B-202ENST00000517352 C16orf70Q9BSU1 422 aa8.46□□□□□ -1.06
TNFRSF11B-202ENST00000517352 LRFN3Q9BTN0 628 aa8.46□□□□□ -1.06
TNFRSF11B-202ENST00000517352 C11orf84Q9BUA3 381 aaPredicted RBP8.46□□□□□ -1.06
TNFRSF11B-202ENST00000517352 NSUN3Q9H649 340 aaKnown RBP8.46□□□□□ -1.06
TNFRSF11B-202ENST00000517352 IGFLR1Q9H665 355 aa8.46□□□□□ -1.06
TNFRSF11B-202ENST00000517352 LRFN2Q9ULH4 789 aa8.46□□□□□ -1.06
TNFRSF11B-202ENST00000517352 NAP1L2Q9ULW6 460 aaPredicted RBP8.46□□□□□ -1.06
TNFRSF11B-202ENST00000517352 TRPC6Q9Y210 931 aa8.46□□□□□ -1.06
TNFRSF11B-202ENST00000517352 SLC12A7Q9Y666 1083 aa8.46□□□□□ -1.06
TNFRSF11B-202ENST00000517352 MYO9BQ13459 2157 aa8.46□□□□□ -1.06
TNFRSF11B-202ENST00000517352 XIRP2A4UGR9 3374 aa8.46□□□□□ -1.06
TNFRSF11B-202ENST00000517352 LPXNO60711 386 aa8.45□□□□□ -1.06
TNFRSF11B-202ENST00000517352 PPP1R11O60927 126 aaPredicted RBP8.45□□□□□ -1.06
TNFRSF11B-202ENST00000517352 ARHGEF15O94989 841 aa8.45□□□□□ -1.06
TNFRSF11B-202ENST00000517352 GHRP10912 638 aa8.45□□□□□ -1.06
TNFRSF11B-202ENST00000517352 MCM5P33992 734 aa8.45□□□□□ -1.06
TNFRSF11B-202ENST00000517352 MTMR1Q13613 665 aa8.45□□□□□ -1.06
TNFRSF11B-202ENST00000517352 SEC23AQ15436 765 aa8.45□□□□□ -1.06
TNFRSF11B-202ENST00000517352 LEXMQ3ZCV2 418 aa8.45□□□□□ -1.06
TNFRSF11B-202ENST00000517352 PCNX4Q63HM2 1172 aa8.45□□□□□ -1.06
TNFRSF11B-202ENST00000517352 ASTLQ6HA08 431 aaPredicted RBP8.45□□□□□ -1.06
TNFRSF11B-202ENST00000517352 USP17L6PQ6QN14 398 aa8.45□□□□□ -1.06
TNFRSF11B-202ENST00000517352 HEATR3Q7Z4Q2 680 aa8.45□□□□□ -1.06
TNFRSF11B-202ENST00000517352 SPRED2Q7Z698 418 aa8.45□□□□□ -1.06
TNFRSF11B-202ENST00000517352 IL31RAQ8NI17 732 aa8.45□□□□□ -1.06
TNFRSF11B-202ENST00000517352 SEPT1Q8WYJ6 367 aa8.45□□□□□ -1.06
TNFRSF11B-202ENST00000517352 POP1Q99575 1024 aaKnown RBP8.45□□□□□ -1.06
TNFRSF11B-202ENST00000517352 GPR20Q99678 358 aa8.45□□□□□ -1.06
TNFRSF11B-202ENST00000517352 FAM49AQ9H0Q0 323 aaPredicted RBP8.45□□□□□ -1.06
TNFRSF11B-202ENST00000517352 SMARCAD1Q9H4L7 1026 aa8.45□□□□□ -1.06
TNFRSF11B-202ENST00000517352 RIOX1Q9H6W3 641 aa8.45□□□□□ -1.06
TNFRSF11B-202ENST00000517352 TUBE1Q9UJT0 475 aa8.45□□□□□ -1.06
TNFRSF11B-202ENST00000517352 GINS2Q9Y248 185 aa8.45□□□□□ -1.06
TNFRSF11B-202ENST00000517352 LRRC37A2A6NM11 1700 aa8.44□□□□□ -1.06
TNFRSF11B-202ENST00000517352 RRN3P2A6NIE6 340 aa8.44□□□□□ -1.06
TNFRSF11B-202ENST00000517352 H3BNC9 293 aa8.44□□□□□ -1.06
TNFRSF11B-202ENST00000517352 BACH1O14867 736 aa8.44□□□□□ -1.06
TNFRSF11B-202ENST00000517352 PRC1O43663 620 aa8.44□□□□□ -1.06
TNFRSF11B-202ENST00000517352 RGS20O76081 388 aa8.44□□□□□ -1.06
TNFRSF11B-202ENST00000517352 DDAH1O94760 285 aa8.44□□□□□ -1.06
TNFRSF11B-202ENST00000517352 RB1P06400 928 aa8.44□□□□□ -1.06
TNFRSF11B-202ENST00000517352 CYP21A2P08686 494 aa8.44□□□□□ -1.06
TNFRSF11B-202ENST00000517352 STAG3L1P0CL83 205 aa8.44□□□□□ -1.06
TNFRSF11B-202ENST00000517352 ICAM3P32942 547 aa8.44□□□□□ -1.06
TNFRSF11B-202ENST00000517352 NDUFV1P49821 464 aa8.44□□□□□ -1.06
TNFRSF11B-202ENST00000517352 MBTPS1Q14703 1052 aa8.44□□□□□ -1.06
TNFRSF11B-202ENST00000517352 GPNMBQ14956 572 aa8.44□□□□□ -1.06
TNFRSF11B-202ENST00000517352 CLUL1Q15846 466 aa8.44□□□□□ -1.06
TNFRSF11B-202ENST00000517352 TRIM71Q2Q1W2 868 aaKnown RBP8.44□□□□□ -1.06
TNFRSF11B-202ENST00000517352 TCEAL5Q5H9L2 206 aa8.44□□□□□ -1.06
TNFRSF11B-202ENST00000517352 TTC22Q5TAA0 569 aa8.44□□□□□ -1.06
TNFRSF11B-202ENST00000517352 RNF20Q5VTR2 975 aa8.44□□□□□ -1.06
TNFRSF11B-202ENST00000517352 TRIM50Q86XT4 487 aa8.44□□□□□ -1.06
TNFRSF11B-202ENST00000517352 CKAP2LQ8IYA6 745 aa8.44□□□□□ -1.06
TNFRSF11B-202ENST00000517352 ZNF654Q8IZM8 581 aa8.44□□□□□ -1.06
TNFRSF11B-202ENST00000517352 TMEM87AQ8NBN3 555 aa8.44□□□□□ -1.06
TNFRSF11B-202ENST00000517352 GPKOWQ92917 476 aaPredicted RBP eCLIP8.44□□□□□ -1.06
TNFRSF11B-202ENST00000517352 WNT8BQ93098 351 aa8.44□□□□□ -1.06
TNFRSF11B-202ENST00000517352 MTMR8Q96EF0 704 aa8.44□□□□□ -1.06
TNFRSF11B-202ENST00000517352 FAM212AQ96EL1 285 aa8.44□□□□□ -1.06
TNFRSF11B-202ENST00000517352 INPP4AQ96PE3 977 aaPredicted RBP8.44□□□□□ -1.06
TNFRSF11B-202ENST00000517352 CTAGE1Q96RT6 745 aa8.44□□□□□ -1.06
TNFRSF11B-202ENST00000517352 SENP7Q9BQF6 1050 aa8.44□□□□□ -1.06
TNFRSF11B-202ENST00000517352 MUC3AQ02505 3323 aa8.44□□□□□ -1.06
TNFRSF11B-202ENST00000517352 GRXCR2A6NFK2 248 aa8.43□□□□□ -1.06
TNFRSF11B-202ENST00000517352 PI4K2BG5E9Z4 385 aa8.43□□□□□ -1.06
TNFRSF11B-202ENST00000517352 OPLAHO14841 1288 aa8.43□□□□□ -1.06
TNFRSF11B-202ENST00000517352 MAFGO15525 162 aa8.43□□□□□ -1.06
TNFRSF11B-202ENST00000517352 DCXO43602 365 aa8.43□□□□□ -1.06
TNFRSF11B-202ENST00000517352 GPR37L1O60883 481 aa8.43□□□□□ -1.06
TNFRSF11B-202ENST00000517352 HOXD8P13378 290 aaPredicted RBP8.43□□□□□ -1.06
TNFRSF11B-202ENST00000517352 IL9P15248 144 aa8.43□□□□□ -1.06
TNFRSF11B-202ENST00000517352 NAPAP54920 295 aa8.43□□□□□ -1.06
TNFRSF11B-202ENST00000517352 MRPS9P82933 396 aaKnown RBP8.43□□□□□ -1.06
TNFRSF11B-202ENST00000517352 HTRA4P83105 476 aaPredicted RBP8.43□□□□□ -1.06
TNFRSF11B-202ENST00000517352 GHRHRQ02643 423 aa8.43□□□□□ -1.06
TNFRSF11B-202ENST00000517352 TROAPQ12815 778 aa8.43□□□□□ -1.06
TNFRSF11B-202ENST00000517352 NFX1Q12986 1120 aaKnown RBP8.43□□□□□ -1.06
TNFRSF11B-202ENST00000517352 PAK2Q13177 524 aa8.43□□□□□ -1.06
TNFRSF11B-202ENST00000517352 GRIK4Q16099 956 aa8.43□□□□□ -1.06
TNFRSF11B-202ENST00000517352 ODR4Q5SWX8 454 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms