RNA–Protein interactions for RNA: ENST00000517238.1

SNORA40.16-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 121 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.16-201ENST00000517238 NR2E1Q9Y466 385 aa-0.07□□□□□ -2.42
SNORA40.16-201ENST00000517238 NOTCH1P46531 2555 aa-0.08□□□□□ -2.42
SNORA40.16-201ENST00000517238 A0A1B0GU03 582 aa-0.08□□□□□ -2.42
SNORA40.16-201ENST00000517238 TMEM129A0AVI4 362 aa-0.08□□□□□ -2.42
SNORA40.16-201ENST00000517238 FAM221BA6H8Z2 402 aa-0.08□□□□□ -2.42
SNORA40.16-201ENST00000517238 USP17L5A8MUK1 530 aa-0.08□□□□□ -2.42
SNORA40.16-201ENST00000517238 LPXNO60711 386 aa-0.08□□□□□ -2.42
SNORA40.16-201ENST00000517238 KLHL18O94889 574 aa-0.08□□□□□ -2.42
SNORA40.16-201ENST00000517238 ZNF432O94892 652 aa-0.08□□□□□ -2.42
SNORA40.16-201ENST00000517238 TOP3BO95985 862 aaKnown RBP-0.08□□□□□ -2.42
SNORA40.16-201ENST00000517238 PRKCGP05129 697 aa-0.08□□□□□ -2.42
SNORA40.16-201ENST00000517238 RPLP1P05386 114 aaKnown RBP-0.08□□□□□ -2.42
SNORA40.16-201ENST00000517238 GM2AP17900 193 aa-0.08□□□□□ -2.42
SNORA40.16-201ENST00000517238 LAG3P18627 525 aa-0.08□□□□□ -2.42
SNORA40.16-201ENST00000517238 MMP13P45452 471 aa-0.08□□□□□ -2.42
SNORA40.16-201ENST00000517238 CACNA2D1P54289 1103 aa-0.08□□□□□ -2.42
SNORA40.16-201ENST00000517238 SEC13P55735 322 aa-0.08□□□□□ -2.42
SNORA40.16-201ENST00000517238 EXOSC10Q01780 885 aaKnown RBP-0.08□□□□□ -2.42
SNORA40.16-201ENST00000517238 MAP3K12Q12852 859 aa-0.08□□□□□ -2.42
SNORA40.16-201ENST00000517238 KCNC3Q14003 757 aa-0.08□□□□□ -2.42
SNORA40.16-201ENST00000517238 NOLC1Q14978 699 aaKnown RBP eCLIP-0.08□□□□□ -2.42
SNORA40.16-201ENST00000517238 LRRC41Q15345 812 aa-0.08□□□□□ -2.42
SNORA40.16-201ENST00000517238 ASIC2Q16515 512 aa-0.08□□□□□ -2.42
SNORA40.16-201ENST00000517238 C8orf34Q49A92 452 aa-0.08□□□□□ -2.42
SNORA40.16-201ENST00000517238 HLA-DQA1Q5Y7H0 255 aa-0.08□□□□□ -2.42
SNORA40.16-201ENST00000517238 PI16Q6UXB8 463 aa-0.08□□□□□ -2.42
SNORA40.16-201ENST00000517238 LYG1Q8N1E2 194 aa-0.08□□□□□ -2.42
SNORA40.16-201ENST00000517238 NETO2Q8NC67 525 aa-0.08□□□□□ -2.42
SNORA40.16-201ENST00000517238 TMEM52Q8NDY8 209 aa-0.08□□□□□ -2.42
SNORA40.16-201ENST00000517238 STK35Q8TDR2 534 aa-0.08□□□□□ -2.42
SNORA40.16-201ENST00000517238 GPR87Q9BY21 358 aa-0.08□□□□□ -2.42
SNORA40.16-201ENST00000517238 MKRN2Q9H000 416 aaKnown RBP-0.08□□□□□ -2.42
SNORA40.16-201ENST00000517238 SEMA5BQ9P283 1151 aa-0.08□□□□□ -2.42
SNORA40.16-201ENST00000517238 ICAM5Q9UMF0 924 aa-0.08□□□□□ -2.42
SNORA40.16-201ENST00000517238 AMOTL2Q9Y2J4 779 aa-0.08□□□□□ -2.42
SNORA40.16-201ENST00000517238 SNED1Q8TER0 1413 aa-0.08□□□□□ -2.42
SNORA40.16-201ENST00000517238 GPR98Q8WXG9 6306 aa-0.08□□□□□ -2.42
SNORA40.16-201ENST00000517238 MATN2O00339 956 aa-0.09□□□□□ -2.42
SNORA40.16-201ENST00000517238 MGST3O14880 152 aa-0.09□□□□□ -2.42
SNORA40.16-201ENST00000517238 KRT5P13647 590 aa-0.09□□□□□ -2.42
SNORA40.16-201ENST00000517238 PDE6AP16499 860 aa-0.09□□□□□ -2.42
SNORA40.16-201ENST00000517238 ARNTP27540 789 aa-0.09□□□□□ -2.42
SNORA40.16-201ENST00000517238 CORO7P57737 925 aa-0.09□□□□□ -2.42
SNORA40.16-201ENST00000517238 NKX3-2P78367 333 aa-0.09□□□□□ -2.42
SNORA40.16-201ENST00000517238 RABEP1Q15276 862 aa-0.09□□□□□ -2.42
SNORA40.16-201ENST00000517238 RPS26P11Q5JNZ5 115 aaPredicted RBP-0.09□□□□□ -2.42
SNORA40.16-201ENST00000517238 MIB1Q86YT6 1006 aa-0.09□□□□□ -2.42
SNORA40.16-201ENST00000517238 EMILIN2Q9BXX0 1053 aa-0.09□□□□□ -2.42
SNORA40.16-201ENST00000517238 NELFAQ9H3P2 528 aa-0.09□□□□□ -2.42
SNORA40.16-201ENST00000517238 AGO3Q9H9G7 860 aaKnown RBP-0.09□□□□□ -2.42
SNORA40.16-201ENST00000517238 NGRNQ9NPE2 291 aaKnown RBP-0.09□□□□□ -2.42
SNORA40.16-201ENST00000517238 AP5S1Q9NUS5 200 aa-0.09□□□□□ -2.42
SNORA40.16-201ENST00000517238 ASB6Q9NWX5 421 aa-0.09□□□□□ -2.42
SNORA40.16-201ENST00000517238 ARPP21Q9UBL0 812 aaPredicted RBP-0.09□□□□□ -2.42
SNORA40.16-201ENST00000517238 ADAMTS1Q9UHI8 967 aa-0.09□□□□□ -2.42
SNORA40.16-201ENST00000517238 PUF60Q9UHX1 559 aaKnown RBP-0.09□□□□□ -2.42
SNORA40.16-201ENST00000517238 PCDHB5Q9Y5E4 795 aa-0.09□□□□□ -2.42
SNORA40.16-201ENST00000517238 HIVEP2P31629 2446 aa-0.09□□□□□ -2.42
SNORA40.16-201ENST00000517238 XDHP47989 1333 aa-0.1□□□□□ -2.42
SNORA40.16-201ENST00000517238 C17orf51A8MQB3 221 aa-0.1□□□□□ -2.43
SNORA40.16-201ENST00000517238 ESRRBO95718 433 aa-0.1□□□□□ -2.43
SNORA40.16-201ENST00000517238 CD1AP06126 327 aa-0.1□□□□□ -2.43
SNORA40.16-201ENST00000517238 UMODP07911 640 aa-0.1□□□□□ -2.43
SNORA40.16-201ENST00000517238 DNAH10OSP0CZ25 163 aa-0.1□□□□□ -2.43
SNORA40.16-201ENST00000517238 PCSK2P16519 638 aa-0.1□□□□□ -2.43
SNORA40.16-201ENST00000517238 RRADP55042 308 aa-0.1□□□□□ -2.43
SNORA40.16-201ENST00000517238 SIM1P81133 766 aaPredicted RBP-0.1□□□□□ -2.43
SNORA40.16-201ENST00000517238 PTPN12Q05209 780 aaKnown RBP-0.1□□□□□ -2.43
SNORA40.16-201ENST00000517238 GRM1Q13255 1194 aa-0.1□□□□□ -2.43
SNORA40.16-201ENST00000517238 MPP3Q13368 585 aa-0.1□□□□□ -2.43
SNORA40.16-201ENST00000517238 LLGL1Q15334 1064 aa-0.1□□□□□ -2.43
SNORA40.16-201ENST00000517238 AKNAD1Q5T1N1 836 aa-0.1□□□□□ -2.43
SNORA40.16-201ENST00000517238 CAPRIN2Q6IMN6 1127 aaKnown RBP-0.1□□□□□ -2.43
SNORA40.16-201ENST00000517238 FAM198BQ6UWH4 519 aa-0.1□□□□□ -2.43
SNORA40.16-201ENST00000517238 C9orf47Q6ZRZ4 202 aa-0.1□□□□□ -2.43
SNORA40.16-201ENST00000517238 NEK8Q86SG6 692 aa-0.1□□□□□ -2.43
SNORA40.16-201ENST00000517238 AEBP1Q8IUX7 1158 aa-0.1□□□□□ -2.43
SNORA40.16-201ENST00000517238 REXO1L1PQ8IX06 675 aa-0.1□□□□□ -2.43
SNORA40.16-201ENST00000517238 SNX29Q8TEQ0 813 aa-0.1□□□□□ -2.43
SNORA40.16-201ENST00000517238 BBXQ8WY36 941 aaPredicted RBP-0.1□□□□□ -2.43
SNORA40.16-201ENST00000517238 MIEF2Q96C03 454 aa-0.1□□□□□ -2.43
SNORA40.16-201ENST00000517238 FAM84BQ96KN1 310 aaPredicted RBP-0.1□□□□□ -2.43
SNORA40.16-201ENST00000517238 MPHOSPH9Q99550 1183 aa-0.1□□□□□ -2.43
SNORA40.16-201ENST00000517238 YIPF4Q9BSR8 244 aa-0.1□□□□□ -2.43
SNORA40.16-201ENST00000517238 VPS16Q9H269 839 aa-0.1□□□□□ -2.43
SNORA40.16-201ENST00000517238 EHMT1Q9H9B1 1298 aa-0.1□□□□□ -2.43
SNORA40.16-201ENST00000517238 MSL2Q9HCI7 577 aa-0.1□□□□□ -2.43
SNORA40.16-201ENST00000517238 TMEM39AQ9NV64 488 aa-0.1□□□□□ -2.43
SNORA40.16-201ENST00000517238 KIAA1522Q9P206 1035 aaPredicted RBP-0.1□□□□□ -2.43
SNORA40.16-201ENST00000517238 SIT1Q9Y3P8 196 aa-0.1□□□□□ -2.43
SNORA40.16-201ENST00000517238 CD8B2A6NJW9 211 aa-0.11□□□□□ -2.43
SNORA40.16-201ENST00000517238 ARID3CA6NKF2 412 aa-0.11□□□□□ -2.43
SNORA40.16-201ENST00000517238 LACTBL1A8MY62 500 aa-0.11□□□□□ -2.43
SNORA40.16-201ENST00000517238 TULP1O00294 542 aaPredicted RBP-0.11□□□□□ -2.43
SNORA40.16-201ENST00000517238 WNT9AO14904 365 aa-0.11□□□□□ -2.43
SNORA40.16-201ENST00000517238 TNFRSF21O75509 655 aa-0.11□□□□□ -2.43
SNORA40.16-201ENST00000517238 DKK1O94907 266 aa-0.11□□□□□ -2.43
SNORA40.16-201ENST00000517238 POLR3DP05423 398 aaPredicted RBP-0.11□□□□□ -2.43
SNORA40.16-201ENST00000517238 GRK4P32298 578 aa-0.11□□□□□ -2.43
SNORA40.16-201ENST00000517238 CDKN2AP42771 156 aaKnown RBP-0.11□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms