RNA–Protein interactions for RNA: ENST00000517215.1

RNU6-1238P-201, Transcript of RNA, U6 small nuclear 1238, pseudogene, humanhuman

BASIC

Gene RNU6-1238P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1238P-201ENST00000517215 IRF9Q00978 393 aa-0.13□□□□□ -2.43
RNU6-1238P-201ENST00000517215 NMIQ13287 307 aaPredicted RBP-0.13□□□□□ -2.43
RNU6-1238P-201ENST00000517215 NFYCQ13952 458 aa-0.13□□□□□ -2.43
RNU6-1238P-201ENST00000517215 TRIM25Q14258 630 aaKnown RBP-0.13□□□□□ -2.43
RNU6-1238P-201ENST00000517215 USP10Q14694 798 aaKnown RBP-0.13□□□□□ -2.43
RNU6-1238P-201ENST00000517215 ZNF585BQ52M93 769 aa-0.13□□□□□ -2.43
RNU6-1238P-201ENST00000517215 FAM26DQ5JW98 314 aa-0.13□□□□□ -2.43
RNU6-1238P-201ENST00000517215 HIST2H2BDQ6DRA6 164 aa-0.13□□□□□ -2.43
RNU6-1238P-201ENST00000517215 DMKNQ6E0U4 476 aaPredicted RBP-0.13□□□□□ -2.43
RNU6-1238P-201ENST00000517215 NEK8Q86SG6 692 aa-0.13□□□□□ -2.43
RNU6-1238P-201ENST00000517215 TMEM52Q8NDY8 209 aa-0.13□□□□□ -2.43
RNU6-1238P-201ENST00000517215 NUDT16Q96DE0 195 aaKnown RBP-0.13□□□□□ -2.43
RNU6-1238P-201ENST00000517215 HES6Q96HZ4 224 aa-0.13□□□□□ -2.43
RNU6-1238P-201ENST00000517215 LMLNQ96KR4 655 aa-0.13□□□□□ -2.43
RNU6-1238P-201ENST00000517215 ZSWIM3Q96MP5 696 aa-0.13□□□□□ -2.43
RNU6-1238P-201ENST00000517215 PYGO2Q9BRQ0 406 aa-0.13□□□□□ -2.43
RNU6-1238P-201ENST00000517215 TMEM79Q9BSE2 394 aa-0.13□□□□□ -2.43
RNU6-1238P-201ENST00000517215 ASPNQ9BXN1 380 aa-0.13□□□□□ -2.43
RNU6-1238P-201ENST00000517215 ALOXE3Q9BYJ1 711 aa-0.13□□□□□ -2.43
RNU6-1238P-201ENST00000517215 WDR11Q9BZH6 1224 aa-0.13□□□□□ -2.43
RNU6-1238P-201ENST00000517215 SEMA4CQ9C0C4 833 aa-0.13□□□□□ -2.43
RNU6-1238P-201ENST00000517215 WNT10AQ9GZT5 417 aa-0.13□□□□□ -2.43
RNU6-1238P-201ENST00000517215 KATNBL1Q9H079 304 aa-0.13□□□□□ -2.43
RNU6-1238P-201ENST00000517215 ASCC2Q9H1I8 757 aaPredicted RBP-0.13□□□□□ -2.43
RNU6-1238P-201ENST00000517215 EHMT1Q9H9B1 1298 aa-0.13□□□□□ -2.43
RNU6-1238P-201ENST00000517215 RXFP1Q9HBX9 757 aa-0.13□□□□□ -2.43
RNU6-1238P-201ENST00000517215 GP6Q9HCN6 339 aa-0.13□□□□□ -2.43
RNU6-1238P-201ENST00000517215 TRMT13Q9NUP7 481 aaKnown RBP-0.13□□□□□ -2.43
RNU6-1238P-201ENST00000517215 ARPP21Q9UBL0 812 aaPredicted RBP-0.13□□□□□ -2.43
RNU6-1238P-201ENST00000517215 NTNG1Q9Y2I2 539 aa-0.13□□□□□ -2.43
RNU6-1238P-201ENST00000517215 DIS3Q9Y2L1 958 aaKnown RBP-0.13□□□□□ -2.43
RNU6-1238P-201ENST00000517215 RBM19Q9Y4C8 960 aaKnown RBP-0.13□□□□□ -2.43
RNU6-1238P-201ENST00000517215 PRAMEF27A3QJZ7 478 aa-0.14□□□□□ -2.43
RNU6-1238P-201ENST00000517215 C17orf51A8MQB3 221 aa-0.14□□□□□ -2.43
RNU6-1238P-201ENST00000517215 A8MU10 97 aa-0.14□□□□□ -2.43
RNU6-1238P-201ENST00000517215 USP17L5A8MUK1 530 aa-0.14□□□□□ -2.43
RNU6-1238P-201ENST00000517215 GRXCR1A8MXD5 290 aa-0.14□□□□□ -2.43
RNU6-1238P-201ENST00000517215 SYT5O00445 386 aa-0.14□□□□□ -2.43
RNU6-1238P-201ENST00000517215 MGST3O14880 152 aa-0.14□□□□□ -2.43
RNU6-1238P-201ENST00000517215 WNT9AO14904 365 aa-0.14□□□□□ -2.43
RNU6-1238P-201ENST00000517215 PHACTR2O75167 634 aa-0.14□□□□□ -2.43
RNU6-1238P-201ENST00000517215 TRIM37O94972 964 aa-0.14□□□□□ -2.43
RNU6-1238P-201ENST00000517215 CHGBP05060 677 aa-0.14□□□□□ -2.43
RNU6-1238P-201ENST00000517215 LAG3P18627 525 aa-0.14□□□□□ -2.43
RNU6-1238P-201ENST00000517215 ZNF10P21506 573 aaPredicted RBP-0.14□□□□□ -2.43
RNU6-1238P-201ENST00000517215 ARNTP27540 789 aa-0.14□□□□□ -2.43
RNU6-1238P-201ENST00000517215 HOXD9P28356 352 aaPredicted RBP-0.14□□□□□ -2.43
RNU6-1238P-201ENST00000517215 LIG3P49916 1009 aa-0.14□□□□□ -2.43
RNU6-1238P-201ENST00000517215 SEC13P55735 322 aa-0.14□□□□□ -2.43
RNU6-1238P-201ENST00000517215 ETF1P62495 437 aaKnown RBP-0.14□□□□□ -2.43
RNU6-1238P-201ENST00000517215 SIM1P81133 766 aaPredicted RBP-0.14□□□□□ -2.43
RNU6-1238P-201ENST00000517215 PPP2R3AQ06190 1150 aa-0.14□□□□□ -2.43
RNU6-1238P-201ENST00000517215 SLC10A2Q12908 348 aaPredicted RBP-0.14□□□□□ -2.43
RNU6-1238P-201ENST00000517215 LLGL1Q15334 1064 aa-0.14□□□□□ -2.43
RNU6-1238P-201ENST00000517215 FCN2Q15485 313 aa-0.14□□□□□ -2.43
RNU6-1238P-201ENST00000517215 TWIST1Q15672 202 aa-0.14□□□□□ -2.43
RNU6-1238P-201ENST00000517215 ASIC2Q16515 512 aa-0.14□□□□□ -2.43
RNU6-1238P-201ENST00000517215 HLA-DQA1Q5Y7H0 255 aa-0.14□□□□□ -2.43
RNU6-1238P-201ENST00000517215 HTR3DQ70Z44 454 aa-0.14□□□□□ -2.43
RNU6-1238P-201ENST00000517215 JAMLQ86YT9 394 aa-0.14□□□□□ -2.43
RNU6-1238P-201ENST00000517215 ARHGEF19Q8IW93 802 aa-0.14□□□□□ -2.43
RNU6-1238P-201ENST00000517215 SULF2Q8IWU5 870 aa-0.14□□□□□ -2.43
RNU6-1238P-201ENST00000517215 MRPL41Q8IXM3 137 aaKnown RBP-0.14□□□□□ -2.43
RNU6-1238P-201ENST00000517215 FAM126BQ8IXS8 530 aa-0.14□□□□□ -2.43
RNU6-1238P-201ENST00000517215 CMTR2Q8IYT2 770 aaKnown RBP-0.14□□□□□ -2.43
RNU6-1238P-201ENST00000517215 OGFOD1Q8N543 542 aa-0.14□□□□□ -2.43
RNU6-1238P-201ENST00000517215 NLGN2Q8NFZ4 835 aa-0.14□□□□□ -2.43
RNU6-1238P-201ENST00000517215 STK35Q8TDR2 534 aa-0.14□□□□□ -2.43
RNU6-1238P-201ENST00000517215 SNX29Q8TEQ0 813 aa-0.14□□□□□ -2.43
RNU6-1238P-201ENST00000517215 ELMO3Q96BJ8 720 aa-0.14□□□□□ -2.43
RNU6-1238P-201ENST00000517215 MYEOVQ96EZ4 313 aa-0.14□□□□□ -2.43
RNU6-1238P-201ENST00000517215 MAML3Q96JK9 1138 aa-0.14□□□□□ -2.43
RNU6-1238P-201ENST00000517215 TRAF4Q9BUZ4 470 aaPredicted RBP-0.14□□□□□ -2.43
RNU6-1238P-201ENST00000517215 CDADC1Q9BWV3 514 aa-0.14□□□□□ -2.43
RNU6-1238P-201ENST00000517215 EMILIN2Q9BXX0 1053 aa-0.14□□□□□ -2.43
RNU6-1238P-201ENST00000517215 KLK15Q9H2R5 256 aa-0.14□□□□□ -2.43
RNU6-1238P-201ENST00000517215 C12orf65Q9H3J6 166 aaKnown RBP-0.14□□□□□ -2.43
RNU6-1238P-201ENST00000517215 AGO3Q9H9G7 860 aaKnown RBP-0.14□□□□□ -2.43
RNU6-1238P-201ENST00000517215 WFDC1Q9HC57 220 aa-0.14□□□□□ -2.43
RNU6-1238P-201ENST00000517215 SNRKQ9NRH2 765 aa-0.14□□□□□ -2.43
RNU6-1238P-201ENST00000517215 CLIP2Q9UDT6 1046 aa-0.14□□□□□ -2.43
RNU6-1238P-201ENST00000517215 CROTQ9UKG9 612 aa-0.14□□□□□ -2.43
RNU6-1238P-201ENST00000517215 AMOTL2Q9Y2J4 779 aa-0.14□□□□□ -2.43
RNU6-1238P-201ENST00000517215 PTPN22Q9Y2R2 807 aa-0.14□□□□□ -2.43
RNU6-1238P-201ENST00000517215 NR2E1Q9Y466 385 aa-0.14□□□□□ -2.43
RNU6-1238P-201ENST00000517215 PCDHB5Q9Y5E4 795 aa-0.14□□□□□ -2.43
RNU6-1238P-201ENST00000517215 MUC6Q6W4X9 2439 aa-0.14□□□□□ -2.43
RNU6-1238P-201ENST00000517215 XDHP47989 1333 aa-0.14□□□□□ -2.43
RNU6-1238P-201ENST00000517215 PRR36Q9H6K5 1346 aa-0.14□□□□□ -2.43
RNU6-1238P-201ENST00000517215 TMEM200CA6NKL6 621 aa-0.15□□□□□ -2.43
RNU6-1238P-201ENST00000517215 APBB1O00213 710 aa-0.15□□□□□ -2.43
RNU6-1238P-201ENST00000517215 SOCS2O14508 198 aa-0.15□□□□□ -2.43
RNU6-1238P-201ENST00000517215 TNFRSF10BO14763 440 aa-0.15□□□□□ -2.43
RNU6-1238P-201ENST00000517215 LPXNO60711 386 aa-0.15□□□□□ -2.43
RNU6-1238P-201ENST00000517215 ZNF432O94892 652 aa-0.15□□□□□ -2.43
RNU6-1238P-201ENST00000517215 CKMP06732 381 aa-0.15□□□□□ -2.43
RNU6-1238P-201ENST00000517215 ZNF888P0CJ79 500 aaPredicted RBP-0.15□□□□□ -2.43
RNU6-1238P-201ENST00000517215 WEE1P30291 646 aa-0.15□□□□□ -2.43
RNU6-1238P-201ENST00000517215 SOX11P35716 441 aa-0.15□□□□□ -2.43
RNU6-1238P-201ENST00000517215 MPLP40238 635 aa-0.15□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms