RNA–Protein interactions for RNA: ENST00000516986.1

RNU6-56P-201, Transcript of RNA, U6 small nuclear 56, pseudogene, humanhuman

BASIC

Gene RNU6-56P, Length 93 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-56P-201ENST00000516986 DDX25Q9UHL0 483 aaKnown RBP3.17□□□□□ -1.9
RNU6-56P-201ENST00000516986 LRCH1Q9Y2L9 728 aa3.17□□□□□ -1.9
RNU6-56P-201ENST00000516986 MED16Q9Y2X0 877 aa3.17□□□□□ -1.9
RNU6-56P-201ENST00000516986 AP1M2Q9Y6Q5 423 aa3.17□□□□□ -1.9
RNU6-56P-201ENST00000516986 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.17□□□□□ -1.9
RNU6-56P-201ENST00000516986 ABCC9O60706 1549 aa3.17□□□□□ -1.9
RNU6-56P-201ENST00000516986 MAP3K19Q56UN5 1328 aa3.17□□□□□ -1.9
RNU6-56P-201ENST00000516986 FRMPD2Q68DX3 1309 aaPredicted RBP3.17□□□□□ -1.9
RNU6-56P-201ENST00000516986 MROH5Q6ZUA9 1318 aa3.17□□□□□ -1.9
RNU6-56P-201ENST00000516986 A0A0G2JS52 829 aa3.16□□□□□ -1.9
RNU6-56P-201ENST00000516986 C17orf113A0A1B0GUU1 675 aa3.16□□□□□ -1.9
RNU6-56P-201ENST00000516986 POTEFA5A3E0 1075 aa3.16□□□□□ -1.9
RNU6-56P-201ENST00000516986 KRBA1A5PL33 1030 aa3.16□□□□□ -1.9
RNU6-56P-201ENST00000516986 LRRC72A6NJI9 287 aa3.16□□□□□ -1.9
RNU6-56P-201ENST00000516986 OR6C65A6NJZ3 312 aa3.16□□□□□ -1.9
RNU6-56P-201ENST00000516986 TRIM75PA6NK02 468 aa3.16□□□□□ -1.9
RNU6-56P-201ENST00000516986 GNAT3A8MTJ3 354 aa3.16□□□□□ -1.9
RNU6-56P-201ENST00000516986 USP17L5A8MUK1 530 aa3.16□□□□□ -1.9
RNU6-56P-201ENST00000516986 FAM155AB1AL88 458 aaPredicted RBP3.16□□□□□ -1.9
RNU6-56P-201ENST00000516986 IRS4O14654 1257 aaPredicted RBP3.16□□□□□ -1.9
RNU6-56P-201ENST00000516986 APAF1O14727 1248 aa3.16□□□□□ -1.9
RNU6-56P-201ENST00000516986 AREL1O15033 823 aa3.16□□□□□ -1.9
RNU6-56P-201ENST00000516986 PLSCR1O15162 318 aa3.16□□□□□ -1.9
RNU6-56P-201ENST00000516986 PDPK1O15530 556 aa3.16□□□□□ -1.9
RNU6-56P-201ENST00000516986 XPOTO43592 962 aaKnown RBP3.16□□□□□ -1.9
RNU6-56P-201ENST00000516986 FOXD2O60548 495 aaPredicted RBP3.16□□□□□ -1.9
RNU6-56P-201ENST00000516986 PDE8AO60658 829 aa3.16□□□□□ -1.9
RNU6-56P-201ENST00000516986 PTCD1O75127 700 aaKnown RBP3.16□□□□□ -1.9
RNU6-56P-201ENST00000516986 ZC3H11AO75152 810 aaKnown RBP eCLIP3.16□□□□□ -1.9
RNU6-56P-201ENST00000516986 USP2O75604 605 aaPredicted RBP3.16□□□□□ -1.9
RNU6-56P-201ENST00000516986 HSPA4LO95757 839 aa3.16□□□□□ -1.9
RNU6-56P-201ENST00000516986 TBC1D8O95759 1140 aa3.16□□□□□ -1.9
RNU6-56P-201ENST00000516986 NPPAP01160 153 aa3.16□□□□□ -1.9
RNU6-56P-201ENST00000516986 DNTTP04053 509 aa3.16□□□□□ -1.9
RNU6-56P-201ENST00000516986 ENO2P09104 434 aaPredicted RBP3.16□□□□□ -1.9
RNU6-56P-201ENST00000516986 BCRP11274 1271 aa3.16□□□□□ -1.9
RNU6-56P-201ENST00000516986 LAG3P18627 525 aa3.16□□□□□ -1.9
RNU6-56P-201ENST00000516986 POLR2EP19388 210 aaKnown RBP3.16□□□□□ -1.9
RNU6-56P-201ENST00000516986 OSBPP22059 807 aa3.16□□□□□ -1.9
RNU6-56P-201ENST00000516986 RPL13P26373 211 aaKnown RBP3.16□□□□□ -1.9
RNU6-56P-201ENST00000516986 SOX6P35712 828 aa3.16□□□□□ -1.9
RNU6-56P-201ENST00000516986 GJA5P36382 358 aa3.16□□□□□ -1.9
RNU6-56P-201ENST00000516986 TRIM23P36406 574 aa3.16□□□□□ -1.9
RNU6-56P-201ENST00000516986 ETFBP38117 255 aa3.16□□□□□ -1.9
RNU6-56P-201ENST00000516986 MSH2P43246 934 aa3.16□□□□□ -1.9
RNU6-56P-201ENST00000516986 MAGEA9P43362 315 aa3.16□□□□□ -1.9
RNU6-56P-201ENST00000516986 SEPHS1P49903 392 aa3.16□□□□□ -1.9
RNU6-56P-201ENST00000516986 TKTL1P51854 596 aa3.16□□□□□ -1.9
RNU6-56P-201ENST00000516986 SLC12A2P55011 1212 aa3.16□□□□□ -1.9
RNU6-56P-201ENST00000516986 CYP4A11Q02928 519 aa3.16□□□□□ -1.9
RNU6-56P-201ENST00000516986 SPAG1Q07617 926 aa3.16□□□□□ -1.9
RNU6-56P-201ENST00000516986 DPYDQ12882 1025 aa3.16□□□□□ -1.9
RNU6-56P-201ENST00000516986 CDC16Q13042 620 aa3.16□□□□□ -1.9
RNU6-56P-201ENST00000516986 SQSTM1Q13501 440 aa3.16□□□□□ -1.9
RNU6-56P-201ENST00000516986 TRPC3Q13507 836 aa3.16□□□□□ -1.9
RNU6-56P-201ENST00000516986 SNX1Q13596 522 aa3.16□□□□□ -1.9
RNU6-56P-201ENST00000516986 PRKG1Q13976 671 aa3.16□□□□□ -1.9
RNU6-56P-201ENST00000516986 SCARB2Q14108 478 aa3.16□□□□□ -1.9
RNU6-56P-201ENST00000516986 NOLC1Q14978 699 aaKnown RBP eCLIP3.16□□□□□ -1.9
RNU6-56P-201ENST00000516986 NFKBIBQ15653 356 aa3.16□□□□□ -1.9
RNU6-56P-201ENST00000516986 TAF12Q16514 161 aa3.16□□□□□ -1.9
RNU6-56P-201ENST00000516986 PPP2R5EQ16537 467 aa3.16□□□□□ -1.9
RNU6-56P-201ENST00000516986 ZNF423Q2M1K9 1284 aa3.16□□□□□ -1.9
RNU6-56P-201ENST00000516986 ZNF792Q3KQV3 632 aa3.16□□□□□ -1.9
RNU6-56P-201ENST00000516986 USH1GQ495M9 461 aa3.16□□□□□ -1.9
RNU6-56P-201ENST00000516986 Q4G0T1 1027 aa3.16□□□□□ -1.9
RNU6-56P-201ENST00000516986 KRTCAP3Q53RY4 240 aa3.16□□□□□ -1.9
RNU6-56P-201ENST00000516986 HSP90AA5PQ58FG0 334 aa3.16□□□□□ -1.9
RNU6-56P-201ENST00000516986 GPR158Q5T848 1215 aa3.16□□□□□ -1.9
RNU6-56P-201ENST00000516986 FBXO31Q5XUX0 539 aaPredicted RBP3.16□□□□□ -1.9
RNU6-56P-201ENST00000516986 KANK2Q63ZY3 851 aa3.16□□□□□ -1.9
RNU6-56P-201ENST00000516986 NEK5Q6P3R8 708 aa3.16□□□□□ -1.9
RNU6-56P-201ENST00000516986 POMZP3Q6PJE2 187 aa3.16□□□□□ -1.9
RNU6-56P-201ENST00000516986 ZYG11AQ6WRX3 759 aa3.16□□□□□ -1.9
RNU6-56P-201ENST00000516986 SPOCD1Q6ZMY3 1216 aa3.16□□□□□ -1.9
RNU6-56P-201ENST00000516986 MFSD6Q6ZSS7 791 aa3.16□□□□□ -1.9
RNU6-56P-201ENST00000516986 CCDC149Q6ZUS6 474 aa3.16□□□□□ -1.9
RNU6-56P-201ENST00000516986 FAM47EQ6ZV65 393 aa3.16□□□□□ -1.9
RNU6-56P-201ENST00000516986 ENOSF1Q7L5Y1 443 aa3.16□□□□□ -1.9
RNU6-56P-201ENST00000516986 NANOGNBQ7Z5D8 188 aa3.16□□□□□ -1.9
RNU6-56P-201ENST00000516986 LRRTM3Q86VH5 581 aa3.16□□□□□ -1.9
RNU6-56P-201ENST00000516986 BPHLQ86WA6 291 aaPredicted RBP3.16□□□□□ -1.9
RNU6-56P-201ENST00000516986 THNSL2Q86YJ6 484 aa3.16□□□□□ -1.9
RNU6-56P-201ENST00000516986 FAM9CQ8IZT9 166 aa3.16□□□□□ -1.9
RNU6-56P-201ENST00000516986 SPARTQ8N0X7 666 aa3.16□□□□□ -1.9
RNU6-56P-201ENST00000516986 LSMEM2Q8N112 164 aa3.16□□□□□ -1.9
RNU6-56P-201ENST00000516986 CNTROBQ8N137 903 aa3.16□□□□□ -1.9
RNU6-56P-201ENST00000516986 ZNF619Q8N2I2 560 aa3.16□□□□□ -1.9
RNU6-56P-201ENST00000516986 SPC24Q8NBT2 197 aa3.16□□□□□ -1.9
RNU6-56P-201ENST00000516986 OR6P1Q8NGX9 317 aa3.16□□□□□ -1.9
RNU6-56P-201ENST00000516986 SSH3Q8TE77 659 aa3.16□□□□□ -1.9
RNU6-56P-201ENST00000516986 DCAF11Q8TEB1 546 aa3.16□□□□□ -1.9
RNU6-56P-201ENST00000516986 HNRNPLLQ8WVV9 542 aaKnown RBP3.16□□□□□ -1.9
RNU6-56P-201ENST00000516986 EZH1Q92800 747 aaPredicted RBP3.16□□□□□ -1.9
RNU6-56P-201ENST00000516986 NINJ1Q92982 152 aa3.16□□□□□ -1.9
RNU6-56P-201ENST00000516986 PPP2R3CQ969Q6 453 aa3.16□□□□□ -1.9
RNU6-56P-201ENST00000516986 NCLNQ969V3 563 aa3.16□□□□□ -1.9
RNU6-56P-201ENST00000516986 TUBGCP3Q96CW5 907 aa3.16□□□□□ -1.9
RNU6-56P-201ENST00000516986 FAXDC2Q96IV6 333 aa3.16□□□□□ -1.9
RNU6-56P-201ENST00000516986 ZC3H10Q96K80 434 aaKnown RBP3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms