RNA–Protein interactions for RNA: ENST00000516850.1

RNU6-1088P-201, Transcript of RNA, U6 small nuclear 1088, pseudogene, humanhuman

BASIC

Gene RNU6-1088P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1088P-201ENST00000516850 ZCCHC14Q8WYQ9 949 aaKnown RBP4.48□□□□□ -1.69
RNU6-1088P-201ENST00000516850 DVL3Q92997 716 aaPredicted RBP4.48□□□□□ -1.69
RNU6-1088P-201ENST00000516850 KISS1RQ969F8 398 aaPredicted RBP4.48□□□□□ -1.69
RNU6-1088P-201ENST00000516850 OSBP2Q969R2 916 aa4.48□□□□□ -1.69
RNU6-1088P-201ENST00000516850 CDK5RAP1Q96SZ6 601 aaKnown RBP4.48□□□□□ -1.69
RNU6-1088P-201ENST00000516850 SPATA9Q9BWV2 254 aa4.48□□□□□ -1.69
RNU6-1088P-201ENST00000516850 RBPJLQ9UBG7 517 aa4.48□□□□□ -1.69
RNU6-1088P-201ENST00000516850 ST6GALNAC2Q9UJ37 374 aa4.48□□□□□ -1.69
RNU6-1088P-201ENST00000516850 BLACEA4D250 179 aa4.47□□□□□ -1.69
RNU6-1088P-201ENST00000516850 GSTA4O15217 222 aa4.47□□□□□ -1.69
RNU6-1088P-201ENST00000516850 NKRFO15226 690 aaKnown RBP eCLIP4.47□□□□□ -1.69
RNU6-1088P-201ENST00000516850 PDPK1O15530 556 aa4.47□□□□□ -1.69
RNU6-1088P-201ENST00000516850 LTFP02788 710 aa4.47□□□□□ -1.69
RNU6-1088P-201ENST00000516850 ZNF20P17024 532 aa4.47□□□□□ -1.69
RNU6-1088P-201ENST00000516850 NAT1P18440 290 aa4.47□□□□□ -1.69
RNU6-1088P-201ENST00000516850 ATP2B1P20020 1258 aa4.47□□□□□ -1.69
RNU6-1088P-201ENST00000516850 GLRBP48167 497 aa4.47□□□□□ -1.69
RNU6-1088P-201ENST00000516850 ZC3H6P61129 1189 aaKnown RBP4.47□□□□□ -1.69
RNU6-1088P-201ENST00000516850 NTRK3Q16288 839 aa4.47□□□□□ -1.69
RNU6-1088P-201ENST00000516850 SKIDA1Q1XH10 827 aa4.47□□□□□ -1.69
RNU6-1088P-201ENST00000516850 ZNF568Q3ZCX4 644 aa4.47□□□□□ -1.69
RNU6-1088P-201ENST00000516850 MTERF2Q49AM1 385 aa4.47□□□□□ -1.69
RNU6-1088P-201ENST00000516850 SLFN13Q68D06 897 aa4.47□□□□□ -1.69
RNU6-1088P-201ENST00000516850 RALYLQ86SE5 291 aaKnown RBP4.47□□□□□ -1.69
RNU6-1088P-201ENST00000516850 IFNL2Q8IZJ0 200 aa4.47□□□□□ -1.69
RNU6-1088P-201ENST00000516850 DTX3Q8N9I9 347 aa4.47□□□□□ -1.69
RNU6-1088P-201ENST00000516850 IGDCC4Q8TDY8 1250 aa4.47□□□□□ -1.69
RNU6-1088P-201ENST00000516850 C1QTNF3Q9BXJ4 246 aa4.47□□□□□ -1.69
RNU6-1088P-201ENST00000516850 IPPKQ9H8X2 491 aa4.47□□□□□ -1.69
RNU6-1088P-201ENST00000516850 PPP4R1LQ9P1A2 415 aa4.47□□□□□ -1.69
RNU6-1088P-201ENST00000516850 WASF3Q9UPY6 502 aa4.47□□□□□ -1.69
RNU6-1088P-201ENST00000516850 CCDC85CA6NKD9 419 aa4.46□□□□□ -1.7
RNU6-1088P-201ENST00000516850 ST5P78524 1137 aa4.46□□□□□ -1.7
RNU6-1088P-201ENST00000516850 PFKPQ01813 784 aa4.46□□□□□ -1.7
RNU6-1088P-201ENST00000516850 PAK1Q13153 545 aa4.46□□□□□ -1.7
RNU6-1088P-201ENST00000516850 PHF19Q5T6S3 580 aa4.46□□□□□ -1.7
RNU6-1088P-201ENST00000516850 YOD1Q5VVQ6 348 aaPredicted RBP4.46□□□□□ -1.7
RNU6-1088P-201ENST00000516850 CD276Q5ZPR3 534 aa4.46□□□□□ -1.7
RNU6-1088P-201ENST00000516850 PKN3Q6P5Z2 889 aa4.46□□□□□ -1.7
RNU6-1088P-201ENST00000516850 DPP8Q6V1X1 898 aaPredicted RBP4.46□□□□□ -1.7
RNU6-1088P-201ENST00000516850 MAMDC2Q7Z304 686 aaPredicted RBP4.46□□□□□ -1.7
RNU6-1088P-201ENST00000516850 PROSER1Q86XN7 944 aa4.46□□□□□ -1.7
RNU6-1088P-201ENST00000516850 PTPRN2Q92932 1015 aa4.46□□□□□ -1.7
RNU6-1088P-201ENST00000516850 MBD6Q96DN6 1003 aa4.46□□□□□ -1.7
RNU6-1088P-201ENST00000516850 CATSPERZQ9NTU4 200 aa4.46□□□□□ -1.7
RNU6-1088P-201ENST00000516850 ZFP69BQ9UJL9 534 aa4.46□□□□□ -1.7
RNU6-1088P-201ENST00000516850 ADAM29Q9UKF5 820 aa4.46□□□□□ -1.7
RNU6-1088P-201ENST00000516850 TCAF1Q9Y4C2 921 aa4.46□□□□□ -1.7
RNU6-1088P-201ENST00000516850 TRBV23-1A0A0A0MS06 115 aa4.45□□□□□ -1.7
RNU6-1088P-201ENST00000516850 C1QTNF3-AMACRE9PGA6 284 aa4.45□□□□□ -1.7
RNU6-1088P-201ENST00000516850 H0Y858 1186 aa4.45□□□□□ -1.7
RNU6-1088P-201ENST00000516850 EPHA5P54756 1037 aa4.45□□□□□ -1.7
RNU6-1088P-201ENST00000516850 EPHB4P54760 987 aa4.45□□□□□ -1.7
RNU6-1088P-201ENST00000516850 SUMO1P63165 101 aaKnown RBP4.45□□□□□ -1.7
RNU6-1088P-201ENST00000516850 SSRP1Q08945 709 aaKnown RBP4.45□□□□□ -1.7
RNU6-1088P-201ENST00000516850 NAALADL2Q58DX5 795 aa4.45□□□□□ -1.7
RNU6-1088P-201ENST00000516850 NBPF6Q5VWK0 638 aa4.45□□□□□ -1.7
RNU6-1088P-201ENST00000516850 BTBD8Q5XKL5 378 aa4.45□□□□□ -1.7
RNU6-1088P-201ENST00000516850 Q6ZUG5 572 aa4.45□□□□□ -1.7
RNU6-1088P-201ENST00000516850 STPG3Q8N7X2 389 aa4.45□□□□□ -1.7
RNU6-1088P-201ENST00000516850 NUDT10Q8NFP7 164 aa4.45□□□□□ -1.7
RNU6-1088P-201ENST00000516850 FBXW5Q969U6 566 aa4.45□□□□□ -1.7
RNU6-1088P-201ENST00000516850 NUDT11Q96G61 164 aa4.45□□□□□ -1.7
RNU6-1088P-201ENST00000516850 NBPF4Q96M43 638 aa4.45□□□□□ -1.7
RNU6-1088P-201ENST00000516850 SSBP3Q9BWW4 388 aaPredicted RBP4.45□□□□□ -1.7
RNU6-1088P-201ENST00000516850 TANGO6Q9C0B7 1094 aa4.45□□□□□ -1.7
RNU6-1088P-201ENST00000516850 PDGFDQ9GZP0 370 aaPredicted RBP4.45□□□□□ -1.7
RNU6-1088P-201ENST00000516850 CCDC113Q9H0I3 377 aa4.45□□□□□ -1.7
RNU6-1088P-201ENST00000516850 RIC8BQ9NVN3 520 aa4.45□□□□□ -1.7
RNU6-1088P-201ENST00000516850 ARHGAP28Q9P2N2 729 aa4.45□□□□□ -1.7
RNU6-1088P-201ENST00000516850 PFDN2Q9UHV9 154 aa4.45□□□□□ -1.7
RNU6-1088P-201ENST00000516850 TRAF6Q9Y4K3 522 aa4.45□□□□□ -1.7
RNU6-1088P-201ENST00000516850 ZNF839A8K0R7 811 aa4.44□□□□□ -1.7
RNU6-1088P-201ENST00000516850 KLHL18O94889 574 aa4.44□□□□□ -1.7
RNU6-1088P-201ENST00000516850 KNG1P01042 644 aa4.44□□□□□ -1.7
RNU6-1088P-201ENST00000516850 ZXDAP98168 799 aa4.44□□□□□ -1.7
RNU6-1088P-201ENST00000516850 GUCY1A3Q02108 690 aa4.44□□□□□ -1.7
RNU6-1088P-201ENST00000516850 RASGRF1Q13972 1273 aa4.44□□□□□ -1.7
RNU6-1088P-201ENST00000516850 ICAM4Q14773 271 aa4.44□□□□□ -1.7
RNU6-1088P-201ENST00000516850 GPR19Q15760 415 aa4.44□□□□□ -1.7
RNU6-1088P-201ENST00000516850 CRY1Q16526 586 aa4.44□□□□□ -1.7
RNU6-1088P-201ENST00000516850 HS1BP3Q53T59 392 aa4.44□□□□□ -1.7
RNU6-1088P-201ENST00000516850 FAM47CQ5HY64 1035 aa4.44□□□□□ -1.7
RNU6-1088P-201ENST00000516850 HABP4Q5JVS0 413 aaKnown RBP4.44□□□□□ -1.7
RNU6-1088P-201ENST00000516850 SPATC1Q76KD6 591 aa4.44□□□□□ -1.7
RNU6-1088P-201ENST00000516850 REXO1L1PQ8IX06 675 aa4.44□□□□□ -1.7
RNU6-1088P-201ENST00000516850 ZBTB38Q8NAP3 1195 aaPredicted RBP4.44□□□□□ -1.7
RNU6-1088P-201ENST00000516850 WDR48Q8TAF3 677 aa4.44□□□□□ -1.7
RNU6-1088P-201ENST00000516850 SH3RF3Q8TEJ3 882 aaPredicted RBP4.44□□□□□ -1.7
RNU6-1088P-201ENST00000516850 AJUBAQ96IF1 538 aa4.44□□□□□ -1.7
RNU6-1088P-201ENST00000516850 TACO1Q9BSH4 297 aaKnown RBP4.44□□□□□ -1.7
RNU6-1088P-201ENST00000516850 HIRIP3Q9BW71 556 aaPredicted RBP4.44□□□□□ -1.7
RNU6-1088P-201ENST00000516850 CD244Q9BZW8 370 aa4.44□□□□□ -1.7
RNU6-1088P-201ENST00000516850 KLC2Q9H0B6 622 aa4.44□□□□□ -1.7
RNU6-1088P-201ENST00000516850 SEMA4AQ9H3S1 761 aa4.44□□□□□ -1.7
RNU6-1088P-201ENST00000516850 KCND1Q9NSA2 647 aa4.44□□□□□ -1.7
RNU6-1088P-201ENST00000516850 SIRPGQ9P1W8 387 aa4.44□□□□□ -1.7
RNU6-1088P-201ENST00000516850 GPR42O15529 346 aa4.43□□□□□ -1.7
RNU6-1088P-201ENST00000516850 COL6A1P12109 1028 aa4.43□□□□□ -1.7
RNU6-1088P-201ENST00000516850 GTF2F1P35269 517 aaKnown RBP eCLIP4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms