RNA–Protein interactions for RNA: ENST00000515418.1

CPNE4-213, Transcript of copine 4, humanhuman

TSL 5

Gene CPNE4, Length 1,958 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-213ENST00000515418 BHMT2Q9H2M3 363 aa10.22□□□□□ -0.77
CPNE4-213ENST00000515418 SLC39A2Q9NP94 309 aa10.22□□□□□ -0.77
CPNE4-213ENST00000515418 EXOC1Q9NV70 894 aa10.22□□□□□ -0.77
CPNE4-213ENST00000515418 FBXO40Q9UH90 709 aa10.22□□□□□ -0.77
CPNE4-213ENST00000515418 DACH1Q9UI36 760 aa10.22□□□□□ -0.77
CPNE4-213ENST00000515418 SAMM50Q9Y512 469 aa10.22□□□□□ -0.77
CPNE4-213ENST00000515418 SLC25A27O95847 323 aa10.21□□□□□ -0.77
CPNE4-213ENST00000515418 CCNE2O96020 404 aa10.21□□□□□ -0.77
CPNE4-213ENST00000515418 CYP11B2P19099 503 aa10.21□□□□□ -0.77
CPNE4-213ENST00000515418 ERCC5P28715 1186 aaPredicted RBP10.21□□□□□ -0.77
CPNE4-213ENST00000515418 ALDH5A1P51649 535 aaPredicted RBP10.21□□□□□ -0.77
CPNE4-213ENST00000515418 SP2Q02086 613 aa10.21□□□□□ -0.77
CPNE4-213ENST00000515418 SP4Q02446 784 aa10.21□□□□□ -0.77
CPNE4-213ENST00000515418 EPHA7Q15375 998 aa10.21□□□□□ -0.77
CPNE4-213ENST00000515418 PTPN21Q16825 1174 aa10.21□□□□□ -0.77
CPNE4-213ENST00000515418 SEPT14Q6ZU15 432 aa10.21□□□□□ -0.77
CPNE4-213ENST00000515418 EEPD1Q7L9B9 569 aa10.21□□□□□ -0.77
CPNE4-213ENST00000515418 ADSSL1Q8N142 457 aa10.21□□□□□ -0.77
CPNE4-213ENST00000515418 GLIS3Q8NEA6 775 aa10.21□□□□□ -0.77
CPNE4-213ENST00000515418 EEF2KMTQ96G04 330 aa10.21□□□□□ -0.77
CPNE4-213ENST00000515418 INPP4AQ96PE3 977 aaPredicted RBP10.21□□□□□ -0.77
CPNE4-213ENST00000515418 TBC1D7Q9P0N9 293 aa10.21□□□□□ -0.77
CPNE4-213ENST00000515418 IFNKQ9P0W0 207 aa10.21□□□□□ -0.77
CPNE4-213ENST00000515418 NRBP1Q9UHY1 535 aa10.21□□□□□ -0.77
CPNE4-213ENST00000515418 PFASO15067 1338 aa10.21□□□□□ -0.77
CPNE4-213ENST00000515418 TRPM7Q96QT4 1865 aa10.21□□□□□ -0.77
CPNE4-213ENST00000515418 MCM3APO60318 1980 aa10.21□□□□□ -0.77
CPNE4-213ENST00000515418 TRIM49BA6NDI0 452 aa10.21□□□□□ -0.78
CPNE4-213ENST00000515418 PMS1P54277 932 aaKnown RBP10.21□□□□□ -0.78
CPNE4-213ENST00000515418 LRRC41Q15345 812 aa10.21□□□□□ -0.78
CPNE4-213ENST00000515418 STXBP2Q15833 593 aa10.21□□□□□ -0.78
CPNE4-213ENST00000515418 XRRA1Q6P2D8 792 aa10.21□□□□□ -0.78
CPNE4-213ENST00000515418 NLRX1Q86UT6 975 aa10.21□□□□□ -0.78
CPNE4-213ENST00000515418 DRC7Q8IY82 874 aa10.21□□□□□ -0.78
CPNE4-213ENST00000515418 FAM133AQ8N9E0 248 aa10.21□□□□□ -0.78
CPNE4-213ENST00000515418 SYT2Q8N9I0 419 aaPredicted RBP10.21□□□□□ -0.78
CPNE4-213ENST00000515418 KIAA0895Q8NCT3 520 aa10.21□□□□□ -0.78
CPNE4-213ENST00000515418 GPRC5AQ8NFJ5 357 aa10.21□□□□□ -0.78
CPNE4-213ENST00000515418 DNERQ8NFT8 737 aa10.21□□□□□ -0.78
CPNE4-213ENST00000515418 NELFBQ8WX92 580 aa10.21□□□□□ -0.78
CPNE4-213ENST00000515418 ZNF830Q96NB3 372 aaPredicted RBP10.21□□□□□ -0.78
CPNE4-213ENST00000515418 IWS1Q96ST2 819 aa10.21□□□□□ -0.78
CPNE4-213ENST00000515418 MMP19Q99542 508 aa10.21□□□□□ -0.78
CPNE4-213ENST00000515418 SH2D3AQ9BRG2 576 aa10.21□□□□□ -0.78
CPNE4-213ENST00000515418 LXNQ9BS40 222 aa10.21□□□□□ -0.78
CPNE4-213ENST00000515418 ZHX3Q9H4I2 956 aa10.21□□□□□ -0.78
CPNE4-213ENST00000515418 TUFT1Q9NNX1 390 aa10.21□□□□□ -0.78
CPNE4-213ENST00000515418 TBC1D22BQ9NU19 505 aa10.21□□□□□ -0.78
CPNE4-213ENST00000515418 PANK4Q9NVE7 773 aa10.21□□□□□ -0.78
CPNE4-213ENST00000515418 PNMA3Q9UL41 463 aa10.21□□□□□ -0.78
CPNE4-213ENST00000515418 PVALEFA0A1B0GWK0 134 aa10.2□□□□□ -0.78
CPNE4-213ENST00000515418 SFI1A8K8P3 1242 aa10.2□□□□□ -0.78
CPNE4-213ENST00000515418 EIF3JO75822 258 aaKnown RBP10.2□□□□□ -0.78
CPNE4-213ENST00000515418 KRT18P05783 430 aaKnown RBP10.2□□□□□ -0.78
CPNE4-213ENST00000515418 PTMAP06454 111 aaKnown RBP10.2□□□□□ -0.78
CPNE4-213ENST00000515418 ZBTB48P10074 688 aaPredicted RBP10.2□□□□□ -0.78
CPNE4-213ENST00000515418 CDK11BP21127 795 aaKnown RBP10.2□□□□□ -0.78
CPNE4-213ENST00000515418 FANCCQ00597 558 aa10.2□□□□□ -0.78
CPNE4-213ENST00000515418 KCTD2Q14681 263 aa10.2□□□□□ -0.78
CPNE4-213ENST00000515418 SPATA1Q5VX52 437 aa10.2□□□□□ -0.78
CPNE4-213ENST00000515418 SARM1Q6SZW1 724 aa10.2□□□□□ -0.78
CPNE4-213ENST00000515418 UNC13DQ70J99 1090 aa10.2□□□□□ -0.78
CPNE4-213ENST00000515418 ANKRD23Q86SG2 305 aa10.2□□□□□ -0.78
CPNE4-213ENST00000515418 SAPCD2Q86UD0 394 aa10.2□□□□□ -0.78
CPNE4-213ENST00000515418 GPRASP2Q96D09 838 aa10.2□□□□□ -0.78
CPNE4-213ENST00000515418 TRIM44Q96DX7 344 aaPredicted RBP10.2□□□□□ -0.78
CPNE4-213ENST00000515418 NAP1L5Q96NT1 182 aaPredicted RBP10.2□□□□□ -0.78
CPNE4-213ENST00000515418 RUSC1Q9BVN2 902 aa10.2□□□□□ -0.78
CPNE4-213ENST00000515418 XPO4Q9C0E2 1151 aaKnown RBP10.2□□□□□ -0.78
CPNE4-213ENST00000515418 BMP2KQ9NSY1 1161 aaPredicted RBP10.2□□□□□ -0.78
CPNE4-213ENST00000515418 STK24Q9Y6E0 443 aa10.2□□□□□ -0.78
CPNE4-213ENST00000515418 DOCK3Q8IZD9 2030 aa10.19□□□□□ -0.78
CPNE4-213ENST00000515418 SYNRGQ9UMZ2 1314 aa10.19□□□□□ -0.78
CPNE4-213ENST00000515418 WDR81Q562E7 1941 aa10.19□□□□□ -0.78
CPNE4-213ENST00000515418 TMEM150BA6NC51 233 aa10.19□□□□□ -0.78
CPNE4-213ENST00000515418 RSPH10B2B2RC85 870 aa10.19□□□□□ -0.78
CPNE4-213ENST00000515418 SPATA31C2B4DYI2 1134 aa10.19□□□□□ -0.78
CPNE4-213ENST00000515418 SLC26A4O43511 780 aa10.19□□□□□ -0.78
CPNE4-213ENST00000515418 EYA4O95677 639 aa10.19□□□□□ -0.78
CPNE4-213ENST00000515418 RSPH10BP0C881 870 aa10.19□□□□□ -0.78
CPNE4-213ENST00000515418 KCNA2P16389 499 aa10.19□□□□□ -0.78
CPNE4-213ENST00000515418 TPM4P67936 248 aa10.19□□□□□ -0.78
CPNE4-213ENST00000515418 PAK1Q13153 545 aa10.19□□□□□ -0.78
CPNE4-213ENST00000515418 GIT2Q14161 759 aa10.19□□□□□ -0.78
CPNE4-213ENST00000515418 UGCGQ16739 394 aa10.19□□□□□ -0.78
CPNE4-213ENST00000515418 CNNM4Q6P4Q7 775 aa10.19□□□□□ -0.78
CPNE4-213ENST00000515418 CREBRFQ8IUR6 639 aa10.19□□□□□ -0.78
CPNE4-213ENST00000515418 CCDC47Q96A33 483 aaKnown RBP10.19□□□□□ -0.78
CPNE4-213ENST00000515418 FGD4Q96M96 766 aa10.19□□□□□ -0.78
CPNE4-213ENST00000515418 FGFBP2Q9BYJ0 223 aa10.19□□□□□ -0.78
CPNE4-213ENST00000515418 LRRC27Q9C0I9 530 aa10.19□□□□□ -0.78
CPNE4-213ENST00000515418 GPBP1L1Q9HC44 474 aaPredicted RBP10.19□□□□□ -0.78
CPNE4-213ENST00000515418 RWDD2AQ9UIY3 292 aa10.19□□□□□ -0.78
CPNE4-213ENST00000515418 SERPINC1P01008 464 aa10.19□□□□□ -0.78
CPNE4-213ENST00000515418 P4HBP07237 508 aaKnown RBP10.19□□□□□ -0.78
CPNE4-213ENST00000515418 ZNF18P17022 549 aa10.19□□□□□ -0.78
CPNE4-213ENST00000515418 EHHADHQ08426 723 aa10.19□□□□□ -0.78
CPNE4-213ENST00000515418 COASYQ13057 564 aa10.19□□□□□ -0.78
CPNE4-213ENST00000515418 HERC4Q5GLZ8 1057 aaPredicted RBP10.19□□□□□ -0.78
CPNE4-213ENST00000515418 ANKRD40Q6AI12 368 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms