RNA–Protein interactions for RNA: ENST00000513803.5

NFKB1-211, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 4

Gene NFKB1, Length 612 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-211ENST00000513803 CDCA3Q99618 268 aaPredicted RBP12.67□□□□□ -0.38
NFKB1-211ENST00000513803 PXMP2Q9NR77 195 aa12.67□□□□□ -0.38
NFKB1-211ENST00000513803 SETD4Q9NVD3 440 aa12.67□□□□□ -0.38
NFKB1-211ENST00000513803 MRPL11Q9Y3B7 192 aaKnown RBP12.67□□□□□ -0.38
NFKB1-211ENST00000513803 NR2E1Q9Y466 385 aa12.67□□□□□ -0.38
NFKB1-211ENST00000513803 MRPL42Q9Y6G3 142 aaKnown RBP12.67□□□□□ -0.38
NFKB1-211ENST00000513803 MED19A0JLT2 244 aaPredicted RBP12.66□□□□□ -0.38
NFKB1-211ENST00000513803 SORBS3O60504 671 aa12.66□□□□□ -0.38
NFKB1-211ENST00000513803 CHRNA1P02708 482 aa12.66□□□□□ -0.38
NFKB1-211ENST00000513803 FGRP09769 529 aa12.66□□□□□ -0.38
NFKB1-211ENST00000513803 SNHG28P0DPA3 235 aa12.66□□□□□ -0.38
NFKB1-211ENST00000513803 GHRP10912 638 aa12.66□□□□□ -0.38
NFKB1-211ENST00000513803 MYCLP12524 364 aaPredicted RBP12.66□□□□□ -0.38
NFKB1-211ENST00000513803 CLCN5P51795 746 aa12.66□□□□□ -0.38
NFKB1-211ENST00000513803 MFSD1Q9H3U5 465 aa12.66□□□□□ -0.38
NFKB1-211ENST00000513803 EHMT1Q9H9B1 1298 aa12.66□□□□□ -0.38
NFKB1-211ENST00000513803 ZBTB40Q9NUA8 1239 aa12.66□□□□□ -0.38
NFKB1-211ENST00000513803 SORCS3Q9UPU3 1222 aa12.66□□□□□ -0.38
NFKB1-211ENST00000513803 MYH7BA7E2Y1 1941 aa12.66□□□□□ -0.38
NFKB1-211ENST00000513803 KIAA1217Q5T5P2 1943 aa12.66□□□□□ -0.38
NFKB1-211ENST00000513803 DMDP11532 3685 aa12.66□□□□□ -0.38
NFKB1-211ENST00000513803 MYO10Q9HD67 2058 aa12.65□□□□□ -0.38
NFKB1-211ENST00000513803 CEP250Q9BV73 2442 aa12.65□□□□□ -0.38
NFKB1-211ENST00000513803 NOP56O00567 594 aaKnown RBP12.65□□□□□ -0.38
NFKB1-211ENST00000513803 PER2O15055 1255 aa12.65□□□□□ -0.38
NFKB1-211ENST00000513803 SMARCA5O60264 1052 aaPredicted RBP12.65□□□□□ -0.38
NFKB1-211ENST00000513803 PPFIA3O75145 1194 aa12.65□□□□□ -0.38
NFKB1-211ENST00000513803 KRT37O76014 449 aa12.65□□□□□ -0.38
NFKB1-211ENST00000513803 RGS20O76081 388 aa12.65□□□□□ -0.38
NFKB1-211ENST00000513803 LGALS2P05162 132 aa12.65□□□□□ -0.38
NFKB1-211ENST00000513803 SP2Q02086 613 aa12.65□□□□□ -0.38
NFKB1-211ENST00000513803 UBE3AQ05086 875 aa12.65□□□□□ -0.38
NFKB1-211ENST00000513803 CDC37Q16543 378 aaPredicted RBP12.65□□□□□ -0.38
NFKB1-211ENST00000513803 RRP12Q5JTH9 1297 aaKnown RBP12.65□□□□□ -0.38
NFKB1-211ENST00000513803 ZMYM1Q5SVZ6 1142 aa12.65□□□□□ -0.38
NFKB1-211ENST00000513803 PDE12Q6L8Q7 609 aaKnown RBP12.65□□□□□ -0.38
NFKB1-211ENST00000513803 TMEM184AQ6ZMB5 413 aa12.65□□□□□ -0.38
NFKB1-211ENST00000513803 RSPH3Q86UC2 560 aa12.65□□□□□ -0.38
NFKB1-211ENST00000513803 RMDN1Q96DB5 314 aa12.65□□□□□ -0.38
NFKB1-211ENST00000513803 UBA5Q9GZZ9 404 aa12.65□□□□□ -0.38
NFKB1-211ENST00000513803 CHMP4BQ9H444 224 aaKnown RBP12.65□□□□□ -0.38
NFKB1-211ENST00000513803 TTC3P53804 2025 aa12.65□□□□□ -0.38
NFKB1-211ENST00000513803 DMXL1Q9Y485 3027 aa12.65□□□□□ -0.38
NFKB1-211ENST00000513803 ATG2AQ2TAZ0 1938 aa12.64□□□□□ -0.39
NFKB1-211ENST00000513803 CFBP00751 764 aa12.64□□□□□ -0.39
NFKB1-211ENST00000513803 GOLGA8HP0CJ92 632 aa12.64□□□□□ -0.39
NFKB1-211ENST00000513803 STAG3L1P0CL83 205 aa12.64□□□□□ -0.39
NFKB1-211ENST00000513803 HOXB8P17481 243 aaPredicted RBP12.64□□□□□ -0.39
NFKB1-211ENST00000513803 UBA1P22314 1058 aaKnown RBP12.64□□□□□ -0.39
NFKB1-211ENST00000513803 ARHGAP4P98171 946 aa12.64□□□□□ -0.39
NFKB1-211ENST00000513803 PUM1Q14671 1186 aaKnown RBP eCLIP12.64□□□□□ -0.39
NFKB1-211ENST00000513803 LPIN1Q14693 890 aa12.64□□□□□ -0.39
NFKB1-211ENST00000513803 DUSP6Q16828 381 aa12.64□□□□□ -0.39
NFKB1-211ENST00000513803 TAF2Q6P1X5 1199 aa12.64□□□□□ -0.39
NFKB1-211ENST00000513803 VSIG10LQ86VR7 867 aa12.64□□□□□ -0.39
NFKB1-211ENST00000513803 KCNG4Q8TDN1 519 aa12.64□□□□□ -0.39
NFKB1-211ENST00000513803 S1PR5Q9H228 398 aa12.64□□□□□ -0.39
NFKB1-211ENST00000513803 SEMA4AQ9H3S1 761 aa12.64□□□□□ -0.39
NFKB1-211ENST00000513803 MAP3K20Q9NYL2 800 aaKnown RBP12.64□□□□□ -0.39
NFKB1-211ENST00000513803 ZNF215Q9UL58 517 aaPredicted RBP12.64□□□□□ -0.39
NFKB1-211ENST00000513803 DDX19BQ9UMR2 479 aa12.64□□□□□ -0.39
NFKB1-211ENST00000513803 PCDHB12Q9Y5F1 795 aa12.64□□□□□ -0.39
NFKB1-211ENST00000513803 PCDHGC5Q9Y5F6 944 aa12.64□□□□□ -0.39
NFKB1-211ENST00000513803 CHD8Q9HCK8 2581 aa12.64□□□□□ -0.39
NFKB1-211ENST00000513803 CCDC171Q6TFL3 1326 aa12.63□□□□□ -0.39
NFKB1-211ENST00000513803 NRCAMQ92823 1304 aa12.63□□□□□ -0.39
NFKB1-211ENST00000513803 BRD1O95696 1058 aa12.63□□□□□ -0.39
NFKB1-211ENST00000513803 ADAM17P78536 824 aa12.63□□□□□ -0.39
NFKB1-211ENST00000513803 ANKRD54Q6NXT1 300 aa12.63□□□□□ -0.39
NFKB1-211ENST00000513803 NPAS4Q8IUM7 802 aa12.63□□□□□ -0.39
NFKB1-211ENST00000513803 PDCD2LQ9BRP1 358 aa12.63□□□□□ -0.39
NFKB1-211ENST00000513803 FTHL17Q9BXU8 183 aa12.63□□□□□ -0.39
NFKB1-211ENST00000513803 TSHZ2Q9NRE2 1034 aa12.63□□□□□ -0.39
NFKB1-211ENST00000513803 AAASQ9NRG9 546 aa12.63□□□□□ -0.39
NFKB1-211ENST00000513803 SPTBN2O15020 2390 aa12.62□□□□□ -0.39
NFKB1-211ENST00000513803 SP100P23497 879 aaPredicted RBP12.62□□□□□ -0.39
NFKB1-211ENST00000513803 TECP42680 631 aa12.62□□□□□ -0.39
NFKB1-211ENST00000513803 HSD17B4P51659 736 aa12.62□□□□□ -0.39
NFKB1-211ENST00000513803 RBM10P98175 930 aaKnown RBP12.62□□□□□ -0.39
NFKB1-211ENST00000513803 ALX1Q15699 326 aa12.62□□□□□ -0.39
NFKB1-211ENST00000513803 PAN2Q504Q3 1202 aaKnown RBP12.62□□□□□ -0.39
NFKB1-211ENST00000513803 FBXO47Q5MNV8 452 aa12.62□□□□□ -0.39
NFKB1-211ENST00000513803 TSHZ3Q63HK5 1081 aa12.62□□□□□ -0.39
NFKB1-211ENST00000513803 TSHZ1Q6ZSZ6 1077 aa12.62□□□□□ -0.39
NFKB1-211ENST00000513803 STOX1Q6ZVD7 989 aa12.62□□□□□ -0.39
NFKB1-211ENST00000513803 ADGRF4Q8IZF3 695 aa12.62□□□□□ -0.39
NFKB1-211ENST00000513803 CRIPAKQ8N1N5 446 aa12.62□□□□□ -0.39
NFKB1-211ENST00000513803 VN1R2Q8NFZ6 395 aa12.62□□□□□ -0.39
NFKB1-211ENST00000513803 LMBR1Q8WVP7 490 aa12.62□□□□□ -0.39
NFKB1-211ENST00000513803 CPVLQ9H3G5 476 aa12.62□□□□□ -0.39
NFKB1-211ENST00000513803 KMT2BQ9UMN6 2715 aaPredicted RBP12.62□□□□□ -0.39
NFKB1-211ENST00000513803 FOXP2O15409 715 aa12.61□□□□□ -0.39
NFKB1-211ENST00000513803 DHX16O60231 1041 aaKnown RBP12.61□□□□□ -0.39
NFKB1-211ENST00000513803 LMNAP02545 664 aaKnown RBP12.61□□□□□ -0.39
NFKB1-211ENST00000513803 CCND2P30279 289 aa12.61□□□□□ -0.39
NFKB1-211ENST00000513803 NEDD9Q14511 834 aa12.61□□□□□ -0.39
NFKB1-211ENST00000513803 PGM5Q15124 567 aa12.61□□□□□ -0.39
NFKB1-211ENST00000513803 QRICH1Q2TAL8 776 aa12.61□□□□□ -0.39
NFKB1-211ENST00000513803 SPOUT1Q5T280 376 aaKnown RBP12.61□□□□□ -0.39
NFKB1-211ENST00000513803 CES5AQ6NT32 575 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms