RNA–Protein interactions for RNA: ENST00000513266.5

PTPN20-228, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 818 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-228ENST00000513266 FAM26DQ5JW98 314 aa11.31□□□□□ -0.6
PTPN20-228ENST00000513266 VARS2Q5ST30 1063 aaKnown RBP11.31□□□□□ -0.6
PTPN20-228ENST00000513266 RCSD1Q6JBY9 416 aa11.31□□□□□ -0.6
PTPN20-228ENST00000513266 LLGL2Q6P1M3 1020 aa11.31□□□□□ -0.6
PTPN20-228ENST00000513266 GPR161Q8N6U8 529 aaKnown RBP11.31□□□□□ -0.6
PTPN20-228ENST00000513266 PPTC7Q8NI37 304 aa11.31□□□□□ -0.6
PTPN20-228ENST00000513266 RASGRP4Q8TDF6 673 aa11.31□□□□□ -0.6
PTPN20-228ENST00000513266 NECTIN4Q96NY8 510 aa11.31□□□□□ -0.6
PTPN20-228ENST00000513266 NCDNQ9UBB6 729 aa11.31□□□□□ -0.6
PTPN20-228ENST00000513266 DDX41Q9UJV9 622 aaKnown RBP11.31□□□□□ -0.6
PTPN20-228ENST00000513266 C17orf102A2RUQ5 167 aa11.3□□□□□ -0.6
PTPN20-228ENST00000513266 SOBPA7XYQ1 873 aa11.3□□□□□ -0.6
PTPN20-228ENST00000513266 FSCN2O14926 492 aa11.3□□□□□ -0.6
PTPN20-228ENST00000513266 TGM1P22735 817 aa11.3□□□□□ -0.6
PTPN20-228ENST00000513266 AACSQ86V21 672 aa11.3□□□□□ -0.6
PTPN20-228ENST00000513266 TDRD5Q8NAT2 981 aaKnown RBP11.3□□□□□ -0.6
PTPN20-228ENST00000513266 LINC01599Q8WXQ3 324 aa11.3□□□□□ -0.6
PTPN20-228ENST00000513266 DNAJC2Q99543 621 aaKnown RBP11.3□□□□□ -0.6
PTPN20-228ENST00000513266 ADAM7Q9H2U9 754 aa11.3□□□□□ -0.6
PTPN20-228ENST00000513266 MINDY4BA8MYZ0 360 aa11.29□□□□□ -0.6
PTPN20-228ENST00000513266 B4DLN1 442 aa11.29□□□□□ -0.6
PTPN20-228ENST00000513266 KINO60870 393 aaKnown RBP11.29□□□□□ -0.6
PTPN20-228ENST00000513266 CHRNA1P02708 482 aa11.29□□□□□ -0.6
PTPN20-228ENST00000513266 WEE2P0C1S8 567 aa11.29□□□□□ -0.6
PTPN20-228ENST00000513266 SMIM10L2AP0DMW4 78 aa11.29□□□□□ -0.6
PTPN20-228ENST00000513266 SMIM10L2BP0DMW5 78 aa11.29□□□□□ -0.6
PTPN20-228ENST00000513266 GHRP10912 638 aa11.29□□□□□ -0.6
PTPN20-228ENST00000513266 GATMP50440 423 aa11.29□□□□□ -0.6
PTPN20-228ENST00000513266 MRPL12P52815 198 aaKnown RBP11.29□□□□□ -0.6
PTPN20-228ENST00000513266 UBE3AQ05086 875 aa11.29□□□□□ -0.6
PTPN20-228ENST00000513266 LAMC2Q13753 1193 aa11.29□□□□□ -0.6
PTPN20-228ENST00000513266 ZNF444Q8N0Y2 327 aaPredicted RBP11.29□□□□□ -0.6
PTPN20-228ENST00000513266 NEDD1Q8NHV4 660 aa11.29□□□□□ -0.6
PTPN20-228ENST00000513266 C16orf70Q9BSU1 422 aa11.29□□□□□ -0.6
PTPN20-228ENST00000513266 RNPEPQ9H4A4 650 aa11.29□□□□□ -0.6
PTPN20-228ENST00000513266 EHMT1Q9H9B1 1298 aa11.29□□□□□ -0.6
PTPN20-228ENST00000513266 FBXL21Q9UKT6 434 aa11.29□□□□□ -0.6
PTPN20-228ENST00000513266 DUSP12Q9UNI6 340 aa11.29□□□□□ -0.6
PTPN20-228ENST00000513266 DOCK8Q8NF50 2099 aa11.28□□□□□ -0.6
PTPN20-228ENST00000513266 KRBA1A5PL33 1030 aa11.28□□□□□ -0.6
PTPN20-228ENST00000513266 PPFIA4O75335 1185 aa11.28□□□□□ -0.6
PTPN20-228ENST00000513266 SLC16A2P36021 539 aa11.28□□□□□ -0.6
PTPN20-228ENST00000513266 ATP8B2P98198 1209 aa11.28□□□□□ -0.6
PTPN20-228ENST00000513266 TBC1D8BQ0IIM8 1120 aa11.28□□□□□ -0.6
PTPN20-228ENST00000513266 TDGQ13569 410 aa11.28□□□□□ -0.6
PTPN20-228ENST00000513266 LPIN1Q14693 890 aa11.28□□□□□ -0.6
PTPN20-228ENST00000513266 TTBK2Q6IQ55 1244 aa11.28□□□□□ -0.6
PTPN20-228ENST00000513266 CES5AQ6NT32 575 aa11.28□□□□□ -0.6
PTPN20-228ENST00000513266 PLCD3Q8N3E9 789 aa11.28□□□□□ -0.6
PTPN20-228ENST00000513266 PUS7LQ9H0K6 701 aaKnown RBP11.28□□□□□ -0.6
PTPN20-228ENST00000513266 MRS2Q9HD23 443 aa11.28□□□□□ -0.6
PTPN20-228ENST00000513266 DLGAP2Q9P1A6 1054 aa11.28□□□□□ -0.6
PTPN20-228ENST00000513266 ANGPTL2Q9UKU9 493 aa11.28□□□□□ -0.6
PTPN20-228ENST00000513266 NAV2Q8IVL1 2488 aa11.28□□□□□ -0.6
PTPN20-228ENST00000513266 NBEAQ8NFP9 2946 aa11.28□□□□□ -0.6
PTPN20-228ENST00000513266 POTEMA6NI47 508 aa11.27□□□□□ -0.61
PTPN20-228ENST00000513266 GSG1L2A8MUP6 293 aa11.27□□□□□ -0.61
PTPN20-228ENST00000513266 FGF18O76093 207 aa11.27□□□□□ -0.61
PTPN20-228ENST00000513266 MTHFRP42898 656 aa11.27□□□□□ -0.61
PTPN20-228ENST00000513266 ITIH3Q06033 890 aa11.27□□□□□ -0.61
PTPN20-228ENST00000513266 APOBRQ0VD83 1088 aa11.27□□□□□ -0.61
PTPN20-228ENST00000513266 HSDL1Q3SXM5 330 aa11.27□□□□□ -0.61
PTPN20-228ENST00000513266 TPRNQ4KMQ1 711 aa11.27□□□□□ -0.61
PTPN20-228ENST00000513266 PLPP4Q5VZY2 271 aa11.27□□□□□ -0.61
PTPN20-228ENST00000513266 PDE12Q6L8Q7 609 aaKnown RBP11.27□□□□□ -0.61
PTPN20-228ENST00000513266 POTEGQ6S5H5 508 aa11.27□□□□□ -0.61
PTPN20-228ENST00000513266 RTN4RL1Q86UN2 441 aaPredicted RBP11.27□□□□□ -0.61
PTPN20-228ENST00000513266 C1orf210Q8IVY1 113 aa11.27□□□□□ -0.61
PTPN20-228ENST00000513266 MAML2Q8IZL2 1156 aaPredicted RBP11.27□□□□□ -0.61
PTPN20-228ENST00000513266 PARD6AQ9NPB6 346 aa11.27□□□□□ -0.61
PTPN20-228ENST00000513266 TNNQ9UQP3 1299 aa11.27□□□□□ -0.61
PTPN20-228ENST00000513266 USTQ9Y2C2 406 aa11.27□□□□□ -0.61
PTPN20-228ENST00000513266 HIDE1A8MVS5 230 aa11.26□□□□□ -0.61
PTPN20-228ENST00000513266 STK25O00506 426 aa11.26□□□□□ -0.61
PTPN20-228ENST00000513266 NARSO43776 548 aaKnown RBP11.26□□□□□ -0.61
PTPN20-228ENST00000513266 SORBS3O60504 671 aa11.26□□□□□ -0.61
PTPN20-228ENST00000513266 EOMESO95936 686 aa11.26□□□□□ -0.61
PTPN20-228ENST00000513266 PROS1P07225 676 aa11.26□□□□□ -0.61
PTPN20-228ENST00000513266 DCNP07585 359 aaKnown RBP11.26□□□□□ -0.61
PTPN20-228ENST00000513266 TSPY3P0CV98 308 aa11.26□□□□□ -0.61
PTPN20-228ENST00000513266 TSPY8P0CW00 308 aa11.26□□□□□ -0.61
PTPN20-228ENST00000513266 PMLP29590 882 aa11.26□□□□□ -0.61
PTPN20-228ENST00000513266 SLFN5Q08AF3 891 aa11.26□□□□□ -0.61
PTPN20-228ENST00000513266 UBE3CQ15386 1083 aa11.26□□□□□ -0.61
PTPN20-228ENST00000513266 SPECC1Q5M775 1068 aa11.26□□□□□ -0.61
PTPN20-228ENST00000513266 MYSM1Q5VVJ2 828 aa11.26□□□□□ -0.61
PTPN20-228ENST00000513266 BTNL9Q6UXG8 535 aa11.26□□□□□ -0.61
PTPN20-228ENST00000513266 NPAS4Q8IUM7 802 aa11.26□□□□□ -0.61
PTPN20-228ENST00000513266 FEZF2Q8TBJ5 459 aa11.26□□□□□ -0.61
PTPN20-228ENST00000513266 TBC1D17Q9HA65 648 aa11.26□□□□□ -0.61
PTPN20-228ENST00000513266 CYP26B1Q9NR63 512 aa11.26□□□□□ -0.61
PTPN20-228ENST00000513266 AAASQ9NRG9 546 aa11.26□□□□□ -0.61
PTPN20-228ENST00000513266 SETD4Q9NVD3 440 aa11.26□□□□□ -0.61
PTPN20-228ENST00000513266 COL20A1Q9P218 1284 aa11.26□□□□□ -0.61
PTPN20-228ENST00000513266 USP18Q9UMW8 372 aa11.26□□□□□ -0.61
PTPN20-228ENST00000513266 SUPT16HQ9Y5B9 1047 aaKnown RBP11.26□□□□□ -0.61
PTPN20-228ENST00000513266 DSPP15924 2871 aaKnown RBP11.26□□□□□ -0.61
PTPN20-228ENST00000513266 H3BRB1 525 aa11.25□□□□□ -0.61
PTPN20-228ENST00000513266 SLC30A4O14863 429 aa11.25□□□□□ -0.61
PTPN20-228ENST00000513266 SPTLC1O15269 473 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms