RNA–Protein interactions for RNA: ENST00000512901.6

LINC01550-203, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 1 (best)

Gene LINC01550, Length 2,192 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-203ENST00000512901 ARHGEF6Q15052 776 aa11.74□□□□□ -0.53
LINC01550-203ENST00000512901 EPHA7Q15375 998 aa11.74□□□□□ -0.53
LINC01550-203ENST00000512901 LY6KQ17RY6 165 aa11.74□□□□□ -0.53
LINC01550-203ENST00000512901 OLFML2BQ68BL8 750 aa11.74□□□□□ -0.53
LINC01550-203ENST00000512901 ZNF746Q6NUN9 644 aaPredicted RBP11.74□□□□□ -0.53
LINC01550-203ENST00000512901 CYFIP1Q7L576 1253 aa11.74□□□□□ -0.53
LINC01550-203ENST00000512901 MLXIPQ9HAP2 919 aa11.74□□□□□ -0.53
LINC01550-203ENST00000512901 PDGFCQ9NRA1 345 aa11.74□□□□□ -0.53
LINC01550-203ENST00000512901 FLRT1Q9NZU1 646 aa11.74□□□□□ -0.53
LINC01550-203ENST00000512901 HOOK1Q9UJC3 728 aaKnown RBP11.74□□□□□ -0.53
LINC01550-203ENST00000512901 TSKSQ9UJT2 592 aa11.74□□□□□ -0.53
LINC01550-203ENST00000512901 POTEB3A0JP26 581 aa11.73□□□□□ -0.53
LINC01550-203ENST00000512901 MED24O75448 989 aa11.73□□□□□ -0.53
LINC01550-203ENST00000512901 ARIH2O95376 493 aa11.73□□□□□ -0.53
LINC01550-203ENST00000512901 SLFN14P0C7P3 912 aa11.73□□□□□ -0.53
LINC01550-203ENST00000512901 RPA1P27694 616 aa11.73□□□□□ -0.53
LINC01550-203ENST00000512901 SFNP31947 248 aa11.73□□□□□ -0.53
LINC01550-203ENST00000512901 DEKP35659 375 aaKnown RBP11.73□□□□□ -0.53
LINC01550-203ENST00000512901 GRB10Q13322 594 aa11.73□□□□□ -0.53
LINC01550-203ENST00000512901 KANK3Q6NY19 840 aa11.73□□□□□ -0.53
LINC01550-203ENST00000512901 POTEBQ6S5H4 581 aa11.73□□□□□ -0.53
LINC01550-203ENST00000512901 B3GNT9Q6UX72 402 aa11.73□□□□□ -0.53
LINC01550-203ENST00000512901 NEK9Q8TD19 979 aa11.73□□□□□ -0.53
LINC01550-203ENST00000512901 ZNF296Q8WUU4 475 aaPredicted RBP11.73□□□□□ -0.53
LINC01550-203ENST00000512901 DYDC2Q96IM9 177 aa11.73□□□□□ -0.53
LINC01550-203ENST00000512901 DDX41Q9UJV9 622 aaKnown RBP11.73□□□□□ -0.53
LINC01550-203ENST00000512901 KIAA1024Q9UPX6 916 aa11.73□□□□□ -0.53
LINC01550-203ENST00000512901 CTAGE5O15320 804 aa11.72□□□□□ -0.53
LINC01550-203ENST00000512901 CCNE2O96020 404 aa11.72□□□□□ -0.53
LINC01550-203ENST00000512901 XRCC5P13010 732 aaKnown RBP11.72□□□□□ -0.53
LINC01550-203ENST00000512901 CYP2C19P33261 490 aa11.72□□□□□ -0.53
LINC01550-203ENST00000512901 CTTNQ14247 550 aaKnown RBP11.72□□□□□ -0.53
LINC01550-203ENST00000512901 E2F4Q16254 413 aa11.72□□□□□ -0.53
LINC01550-203ENST00000512901 TAPT1Q6NXT6 567 aa11.72□□□□□ -0.53
LINC01550-203ENST00000512901 CATSPER3Q86XQ3 398 aa11.72□□□□□ -0.53
LINC01550-203ENST00000512901 TPH2Q8IWU9 490 aa11.72□□□□□ -0.53
LINC01550-203ENST00000512901 DHX37Q8IY37 1157 aaKnown RBP11.72□□□□□ -0.53
LINC01550-203ENST00000512901 SMAP1Q8IYB5 467 aaPredicted RBP11.72□□□□□ -0.53
LINC01550-203ENST00000512901 RDM1Q8NG50 284 aa11.72□□□□□ -0.53
LINC01550-203ENST00000512901 PNMA5Q96PV4 448 aa11.72□□□□□ -0.53
LINC01550-203ENST00000512901 POLR3CQ9BUI4 534 aaPredicted RBP11.72□□□□□ -0.53
LINC01550-203ENST00000512901 CUEDC2Q9H467 287 aa11.72□□□□□ -0.53
LINC01550-203ENST00000512901 BCAS3Q9H6U6 928 aa11.72□□□□□ -0.53
LINC01550-203ENST00000512901 TUFT1Q9NNX1 390 aa11.72□□□□□ -0.53
LINC01550-203ENST00000512901 RGL1Q9NZL6 768 aa11.72□□□□□ -0.53
LINC01550-203ENST00000512901 PCDHA10Q9Y5I2 948 aa11.72□□□□□ -0.53
LINC01550-203ENST00000512901 CASP8AP2Q9UKL3 1982 aa11.72□□□□□ -0.53
LINC01550-203ENST00000512901 POTEFA5A3E0 1075 aa11.72□□□□□ -0.53
LINC01550-203ENST00000512901 ACTN4O43707 911 aaKnown RBP11.72□□□□□ -0.53
LINC01550-203ENST00000512901 FARP2O94887 1054 aaPredicted RBP11.72□□□□□ -0.53
LINC01550-203ENST00000512901 GNRH1P01148 92 aa11.72□□□□□ -0.53
LINC01550-203ENST00000512901 ADCYAP1R1P41586 468 aa11.72□□□□□ -0.53
LINC01550-203ENST00000512901 ACTR2P61160 394 aa11.72□□□□□ -0.53
LINC01550-203ENST00000512901 ZSCAN23Q3MJ62 389 aa11.72□□□□□ -0.53
LINC01550-203ENST00000512901 TMEM119Q4V9L6 283 aa11.72□□□□□ -0.53
LINC01550-203ENST00000512901 HYIQ5T013 277 aa11.72□□□□□ -0.53
LINC01550-203ENST00000512901 MFSD14CQ5VZR4 134 aa11.72□□□□□ -0.53
LINC01550-203ENST00000512901 CCDC62Q6P9F0 684 aa11.72□□□□□ -0.53
LINC01550-203ENST00000512901 POTEGQ6S5H5 508 aa11.72□□□□□ -0.53
LINC01550-203ENST00000512901 METTL7BQ6UX53 244 aa11.72□□□□□ -0.53
LINC01550-203ENST00000512901 KATNBL1Q9H079 304 aa11.72□□□□□ -0.53
LINC01550-203ENST00000512901 STK17AQ9UEE5 414 aa11.72□□□□□ -0.53
LINC01550-203ENST00000512901 SRRDQ9UH36 339 aa11.72□□□□□ -0.53
LINC01550-203ENST00000512901 RBM47A0AV96 593 aaKnown RBP11.71□□□□□ -0.53
LINC01550-203ENST00000512901 NOP56O00567 594 aaKnown RBP11.71□□□□□ -0.53
LINC01550-203ENST00000512901 LETM1O95202 739 aaPredicted RBP11.71□□□□□ -0.53
LINC01550-203ENST00000512901 P4HBP07237 508 aaKnown RBP11.71□□□□□ -0.53
LINC01550-203ENST00000512901 PSAPP07602 524 aa11.71□□□□□ -0.53
LINC01550-203ENST00000512901 SPATA31C1P0DKV0 1188 aa11.71□□□□□ -0.53
LINC01550-203ENST00000512901 AFMP43652 599 aa11.71□□□□□ -0.53
LINC01550-203ENST00000512901 CAP1Q01518 475 aa11.71□□□□□ -0.53
LINC01550-203ENST00000512901 ECM1Q16610 540 aa11.71□□□□□ -0.53
LINC01550-203ENST00000512901 CCDC144BQ3MJ40 725 aa11.71□□□□□ -0.53
LINC01550-203ENST00000512901 PRAMEF19Q5SWL8 479 aa11.71□□□□□ -0.53
LINC01550-203ENST00000512901 CELF3Q5SZQ8 465 aaKnown RBP11.71□□□□□ -0.53
LINC01550-203ENST00000512901 MIS18BP1Q6P0N0 1132 aa11.71□□□□□ -0.53
LINC01550-203ENST00000512901 PDXDC2PQ6P474 469 aa11.71□□□□□ -0.53
LINC01550-203ENST00000512901 CKAP2LQ8IYA6 745 aa11.71□□□□□ -0.53
LINC01550-203ENST00000512901 TRMT44Q8IYL2 757 aaKnown RBP11.71□□□□□ -0.53
LINC01550-203ENST00000512901 BANK1Q8NDB2 785 aa11.71□□□□□ -0.53
LINC01550-203ENST00000512901 COPS5Q92905 334 aa11.71□□□□□ -0.53
LINC01550-203ENST00000512901 HSD17B14Q9BPX1 270 aa11.71□□□□□ -0.53
LINC01550-203ENST00000512901 LXNQ9BS40 222 aa11.71□□□□□ -0.53
LINC01550-203ENST00000512901 MAGEF1Q9HAY2 307 aa11.71□□□□□ -0.53
LINC01550-203ENST00000512901 SYCE3A1L190 88 aa11.71□□□□□ -0.54
LINC01550-203ENST00000512901 BACH1O14867 736 aa11.71□□□□□ -0.54
LINC01550-203ENST00000512901 SLITRK3O94933 977 aa11.71□□□□□ -0.54
LINC01550-203ENST00000512901 GH1P01241 217 aa11.71□□□□□ -0.54
LINC01550-203ENST00000512901 QARSP47897 775 aaKnown RBP11.71□□□□□ -0.54
LINC01550-203ENST00000512901 DHX8Q14562 1220 aaKnown RBP11.71□□□□□ -0.54
LINC01550-203ENST00000512901 NAALADL2Q58DX5 795 aa11.71□□□□□ -0.54
LINC01550-203ENST00000512901 IQSEC1Q6DN90 963 aa11.71□□□□□ -0.54
LINC01550-203ENST00000512901 GRAMD1CQ8IYS0 662 aa11.71□□□□□ -0.54
LINC01550-203ENST00000512901 RAET1EQ8TD07 263 aa11.71□□□□□ -0.54
LINC01550-203ENST00000512901 TRIB2Q92519 343 aa11.71□□□□□ -0.54
LINC01550-203ENST00000512901 LARP4BQ92615 738 aaKnown RBP11.71□□□□□ -0.54
LINC01550-203ENST00000512901 DNM3Q9UQ16 869 aa11.71□□□□□ -0.54
LINC01550-203ENST00000512901 E9PMD0 336 aa11.7□□□□□ -0.54
LINC01550-203ENST00000512901 SSBP05455 408 aaKnown RBP eCLIP11.7□□□□□ -0.54
LINC01550-203ENST00000512901 MUTP22033 750 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms