RNA–Protein interactions for RNA: ENST00000512726.1

RFC1-214, Transcript of replication factor C subunit 1, humanhuman

TSL 2

Gene RFC1, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-214ENST00000512726 IL17RAQ96F46 866 aa9.34□□□□□ -0.91
RFC1-214ENST00000512726 TEKT5Q96M29 485 aa9.34□□□□□ -0.91
RFC1-214ENST00000512726 ACAP3Q96P50 834 aa9.34□□□□□ -0.91
RFC1-214ENST00000512726 MAN1C1Q9NR34 630 aa9.34□□□□□ -0.91
RFC1-214ENST00000512726 SEMA3GQ9NS98 782 aa9.34□□□□□ -0.91
RFC1-214ENST00000512726 GULP1Q9UBP9 304 aa9.34□□□□□ -0.91
RFC1-214ENST00000512726 X6R8D5 127 aa9.34□□□□□ -0.91
RFC1-214ENST00000512726 TCRBV5S4A2TA0A5A2 114 aa9.33□□□□□ -0.92
RFC1-214ENST00000512726 C22orf46C9J442 243 aa9.33□□□□□ -0.92
RFC1-214ENST00000512726 IFRD1O00458 451 aaPredicted RBP9.33□□□□□ -0.92
RFC1-214ENST00000512726 MAN2B1O00754 1011 aa9.33□□□□□ -0.92
RFC1-214ENST00000512726 F13BP05160 661 aa9.33□□□□□ -0.92
RFC1-214ENST00000512726 PHKG2P15735 406 aa9.33□□□□□ -0.92
RFC1-214ENST00000512726 HTRA3P83110 453 aa9.33□□□□□ -0.92
RFC1-214ENST00000512726 GRM3Q14832 879 aa9.33□□□□□ -0.92
RFC1-214ENST00000512726 RRP12Q5JTH9 1297 aaKnown RBP9.33□□□□□ -0.92
RFC1-214ENST00000512726 IFIT1BQ5T764 474 aaKnown RBP9.33□□□□□ -0.92
RFC1-214ENST00000512726 RNF43Q68DV7 783 aa9.33□□□□□ -0.92
RFC1-214ENST00000512726 FAM9AQ8IZU1 332 aaPredicted RBP9.33□□□□□ -0.92
RFC1-214ENST00000512726 SYTL4Q96C24 671 aaPredicted RBP9.33□□□□□ -0.92
RFC1-214ENST00000512726 ZMAT4Q9H898 229 aa9.33□□□□□ -0.92
RFC1-214ENST00000512726 C1orf112Q9NSG2 853 aa9.33□□□□□ -0.92
RFC1-214ENST00000512726 ATG3Q9NT62 314 aa9.33□□□□□ -0.92
RFC1-214ENST00000512726 CCM2LQ9NUG4 571 aaPredicted RBP9.33□□□□□ -0.92
RFC1-214ENST00000512726 SAP30BPQ9UHR5 308 aaKnown RBP9.33□□□□□ -0.92
RFC1-214ENST00000512726 DSEQ9UL01 958 aa9.33□□□□□ -0.92
RFC1-214ENST00000512726 SRPK3Q9UPE1 567 aa9.33□□□□□ -0.92
RFC1-214ENST00000512726 NUB1Q9Y5A7 615 aa9.33□□□□□ -0.92
RFC1-214ENST00000512726 B3GALT1Q9Y5Z6 326 aa9.33□□□□□ -0.92
RFC1-214ENST00000512726 U3KQE9 123 aa9.33□□□□□ -0.92
RFC1-214ENST00000512726 ANO9A1A5B4 782 aa9.32□□□□□ -0.92
RFC1-214ENST00000512726 SCDO00767 359 aa9.32□□□□□ -0.92
RFC1-214ENST00000512726 NKRFO15226 690 aaKnown RBP eCLIP9.32□□□□□ -0.92
RFC1-214ENST00000512726 CLASP2O75122 1294 aaKnown RBP9.32□□□□□ -0.92
RFC1-214ENST00000512726 AKAP5P24588 427 aa9.32□□□□□ -0.92
RFC1-214ENST00000512726 COBLL1Q53SF7 1204 aa9.32□□□□□ -0.92
RFC1-214ENST00000512726 LCE2AQ5TA79 106 aaPredicted RBP9.32□□□□□ -0.92
RFC1-214ENST00000512726 IL31Q6EBC2 164 aa9.32□□□□□ -0.92
RFC1-214ENST00000512726 CC2D1AQ6P1N0 951 aaPredicted RBP9.32□□□□□ -0.92
RFC1-214ENST00000512726 SSH1Q8WYL5 1049 aa9.32□□□□□ -0.92
RFC1-214ENST00000512726 ARPC5LQ9BPX5 153 aa9.32□□□□□ -0.92
RFC1-214ENST00000512726 OSBPL1AQ9BXW6 950 aa9.32□□□□□ -0.92
RFC1-214ENST00000512726 MS4A5Q9H3V2 200 aa9.32□□□□□ -0.92
RFC1-214ENST00000512726 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.32□□□□□ -0.92
RFC1-214ENST00000512726 KCNG1Q9UIX4 513 aa9.32□□□□□ -0.92
RFC1-214ENST00000512726 ADAMTS8Q9UP79 889 aa9.32□□□□□ -0.92
RFC1-214ENST00000512726 PLAGL2Q9UPG8 496 aa9.32□□□□□ -0.92
RFC1-214ENST00000512726 SNX11Q9Y5W9 270 aa9.32□□□□□ -0.92
RFC1-214ENST00000512726 KRIT1O00522 736 aa9.31□□□□□ -0.92
RFC1-214ENST00000512726 FUCA1P04066 466 aa9.31□□□□□ -0.92
RFC1-214ENST00000512726 PTX3P26022 381 aaPredicted RBP9.31□□□□□ -0.92
RFC1-214ENST00000512726 MORC3Q14149 939 aa9.31□□□□□ -0.92
RFC1-214ENST00000512726 PDCD1Q15116 288 aa9.31□□□□□ -0.92
RFC1-214ENST00000512726 SAFBQ15424 915 aaKnown RBP eCLIP9.31□□□□□ -0.92
RFC1-214ENST00000512726 IFI16Q16666 785 aaKnown RBP9.31□□□□□ -0.92
RFC1-214ENST00000512726 MROH9Q5TGP6 573 aa9.31□□□□□ -0.92
RFC1-214ENST00000512726 TREML4Q6UXN2 200 aa9.31□□□□□ -0.92
RFC1-214ENST00000512726 PIP4K2CQ8TBX8 421 aa9.31□□□□□ -0.92
RFC1-214ENST00000512726 DLG3Q92796 817 aa9.31□□□□□ -0.92
RFC1-214ENST00000512726 RUNDC1Q96C34 613 aa9.31□□□□□ -0.92
RFC1-214ENST00000512726 ORAI2Q96SN7 254 aa9.31□□□□□ -0.92
RFC1-214ENST00000512726 CSRNP2Q9H175 543 aa9.31□□□□□ -0.92
RFC1-214ENST00000512726 SLC6A20Q9NP91 592 aa9.31□□□□□ -0.92
RFC1-214ENST00000512726 KCNH7Q9NS40 1196 aa9.31□□□□□ -0.92
RFC1-214ENST00000512726 TNFRSF10DQ9UBN6 386 aa9.31□□□□□ -0.92
RFC1-214ENST00000512726 ATP23Q9Y6H3 246 aa9.31□□□□□ -0.92
RFC1-214ENST00000512726 TMEM265A0A087WTH1 108 aa9.3□□□□□ -0.92
RFC1-214ENST00000512726 OFD1O75665 1012 aa9.3□□□□□ -0.92
RFC1-214ENST00000512726 ZRANB2O95218 330 aaKnown RBP eCLIP9.3□□□□□ -0.92
RFC1-214ENST00000512726 ESR1P03372 595 aa9.3□□□□□ -0.92
RFC1-214ENST00000512726 NEK3P51956 506 aa9.3□□□□□ -0.92
RFC1-214ENST00000512726 C4orf46Q504U0 113 aa9.3□□□□□ -0.92
RFC1-214ENST00000512726 CPZQ66K79 652 aa9.3□□□□□ -0.92
RFC1-214ENST00000512726 FSTL4Q6MZW2 842 aa9.3□□□□□ -0.92
RFC1-214ENST00000512726 RIOX2Q8IUF8 465 aa9.3□□□□□ -0.92
RFC1-214ENST00000512726 SH3RF2Q8TEC5 729 aa9.3□□□□□ -0.92
RFC1-214ENST00000512726 TGFBRAP1Q8WUH2 860 aa9.3□□□□□ -0.92
RFC1-214ENST00000512726 JADE3Q92613 823 aa9.3□□□□□ -0.92
RFC1-214ENST00000512726 LRRC4CQ9HCJ2 640 aa9.3□□□□□ -0.92
RFC1-214ENST00000512726 DNAJC28Q9NX36 388 aa9.3□□□□□ -0.92
RFC1-214ENST00000512726 USP36Q9P275 1121 aaKnown RBP9.3□□□□□ -0.92
RFC1-214ENST00000512726 ZNF281Q9Y2X9 895 aa9.3□□□□□ -0.92
RFC1-214ENST00000512726 PITPNM2Q9BZ72 1349 aa9.3□□□□□ -0.92
RFC1-214ENST00000512726 AP1G1O43747 822 aa9.29□□□□□ -0.92
RFC1-214ENST00000512726 TMEM132BQ14DG7 1078 aa9.29□□□□□ -0.92
RFC1-214ENST00000512726 ZRSR2Q15696 482 aaKnown RBP9.29□□□□□ -0.92
RFC1-214ENST00000512726 CPSF6Q16630 551 aaKnown RBP eCLIP9.29□□□□□ -0.92
RFC1-214ENST00000512726 MIER2Q8N344 545 aa9.29□□□□□ -0.92
RFC1-214ENST00000512726 NLGN2Q8NFZ4 835 aa9.29□□□□□ -0.92
RFC1-214ENST00000512726 UHMK1Q8TAS1 419 aaKnown RBP9.29□□□□□ -0.92
RFC1-214ENST00000512726 SLC35G2Q8TBE7 412 aa9.29□□□□□ -0.92
RFC1-214ENST00000512726 PLEKHO2Q8TD55 490 aa9.29□□□□□ -0.92
RFC1-214ENST00000512726 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.29□□□□□ -0.92
RFC1-214ENST00000512726 TP53INP1Q96A56 240 aa9.29□□□□□ -0.92
RFC1-214ENST00000512726 DBNDD2Q9BQY9 259 aa9.29□□□□□ -0.92
RFC1-214ENST00000512726 ATP13A1Q9HD20 1204 aa9.29□□□□□ -0.92
RFC1-214ENST00000512726 DDX20Q9UHI6 824 aaKnown RBP9.29□□□□□ -0.92
RFC1-214ENST00000512726 A0A1W2PQ45 241 aaPredicted RBP9.28□□□□□ -0.92
RFC1-214ENST00000512726 A0A1W2PQY0 241 aa9.28□□□□□ -0.92
RFC1-214ENST00000512726 MAFKO60675 156 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms