RNA–Protein interactions for RNA: ENST00000512068.1

HTT-209, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-209ENST00000512068 XRCC6P12956 609 aaKnown RBP eCLIP9.07□□□□□ -0.96
HTT-209ENST00000512068 CYP3A7P24462 503 aa9.07□□□□□ -0.96
HTT-209ENST00000512068 CIITAP33076 1130 aa9.07□□□□□ -0.96
HTT-209ENST00000512068 COPB2P35606 906 aa9.07□□□□□ -0.96
HTT-209ENST00000512068 STAT3P40763 770 aa9.07□□□□□ -0.96
HTT-209ENST00000512068 HSD17B4P51659 736 aa9.07□□□□□ -0.96
HTT-209ENST00000512068 CCDC173Q0VFZ6 552 aa9.07□□□□□ -0.96
HTT-209ENST00000512068 PDIA5Q14554 519 aa9.07□□□□□ -0.96
HTT-209ENST00000512068 ARHGEF16Q5VV41 709 aa9.07□□□□□ -0.96
HTT-209ENST00000512068 PDXDC2PQ6P474 469 aa9.07□□□□□ -0.96
HTT-209ENST00000512068 DLK2Q6UY11 383 aa9.07□□□□□ -0.96
HTT-209ENST00000512068 USP49Q70CQ1 688 aa9.07□□□□□ -0.96
HTT-209ENST00000512068 PRRT2Q7Z6L0 340 aaPredicted RBP9.07□□□□□ -0.96
HTT-209ENST00000512068 PLA2G4DQ86XP0 818 aa9.07□□□□□ -0.96
HTT-209ENST00000512068 TRIML1Q8N9V2 468 aa9.07□□□□□ -0.96
HTT-209ENST00000512068 GTF3C2Q8WUA4 911 aaPredicted RBP9.07□□□□□ -0.96
HTT-209ENST00000512068 ERCC4Q92889 916 aaPredicted RBP9.07□□□□□ -0.96
HTT-209ENST00000512068 TRIM44Q96DX7 344 aaPredicted RBP9.07□□□□□ -0.96
HTT-209ENST00000512068 CLMNQ96JQ2 1002 aa9.07□□□□□ -0.96
HTT-209ENST00000512068 FAM20AQ96MK3 541 aa9.07□□□□□ -0.96
HTT-209ENST00000512068 MTMR9Q96QG7 549 aa9.07□□□□□ -0.96
HTT-209ENST00000512068 MAF1Q9H063 256 aa9.07□□□□□ -0.96
HTT-209ENST00000512068 NT5C3AQ9H0P0 336 aa9.07□□□□□ -0.96
HTT-209ENST00000512068 GBA2Q9HCG7 927 aaPredicted RBP9.07□□□□□ -0.96
HTT-209ENST00000512068 STK17AQ9UEE5 414 aa9.07□□□□□ -0.96
HTT-209ENST00000512068 FBXO40Q9UH90 709 aa9.07□□□□□ -0.96
HTT-209ENST00000512068 AGTPBP1Q9UPW5 1226 aa9.07□□□□□ -0.96
HTT-209ENST00000512068 GPSM3Q9Y4H4 160 aa9.07□□□□□ -0.96
HTT-209ENST00000512068 B4DLN1 442 aa9.06□□□□□ -0.96
HTT-209ENST00000512068 NFIBO00712 420 aa9.06□□□□□ -0.96
HTT-209ENST00000512068 OPLAHO14841 1288 aa9.06□□□□□ -0.96
HTT-209ENST00000512068 CELF2O95319 508 aaKnown RBP9.06□□□□□ -0.96
HTT-209ENST00000512068 PLCG1P19174 1290 aa9.06□□□□□ -0.96
HTT-209ENST00000512068 CCT6AP40227 531 aaKnown RBP9.06□□□□□ -0.96
HTT-209ENST00000512068 UBXN2AP68543 259 aa9.06□□□□□ -0.96
HTT-209ENST00000512068 IL17AQ16552 155 aa9.06□□□□□ -0.96
HTT-209ENST00000512068 PLA2G2CQ5R387 149 aa9.06□□□□□ -0.96
HTT-209ENST00000512068 NCAPH2Q6IBW4 605 aa9.06□□□□□ -0.96
HTT-209ENST00000512068 MOB2Q70IA6 237 aa9.06□□□□□ -0.96
HTT-209ENST00000512068 IGSF22Q8N9C0 903 aa9.06□□□□□ -0.96
HTT-209ENST00000512068 CHST13Q8NET6 341 aa9.06□□□□□ -0.96
HTT-209ENST00000512068 ZNF526Q8TF50 670 aaPredicted RBP9.06□□□□□ -0.96
HTT-209ENST00000512068 PAGE5Q96GU1 130 aa9.06□□□□□ -0.96
HTT-209ENST00000512068 MPHOSPH6Q99547 160 aaKnown RBP9.06□□□□□ -0.96
HTT-209ENST00000512068 GTPBP4Q9BZE4 634 aaKnown RBP9.06□□□□□ -0.96
HTT-209ENST00000512068 KCNH4Q9UQ05 1017 aa9.06□□□□□ -0.96
HTT-209ENST00000512068 PCDHA5Q9Y5H7 936 aa9.06□□□□□ -0.96
HTT-209ENST00000512068 TRPM7Q96QT4 1865 aa9.05□□□□□ -0.96
HTT-209ENST00000512068 PP2D1A8MPX8 630 aa9.05□□□□□ -0.96
HTT-209ENST00000512068 POTECB2RU33 542 aa9.05□□□□□ -0.96
HTT-209ENST00000512068 TRAF5O00463 557 aa9.05□□□□□ -0.96
HTT-209ENST00000512068 ATP2A1O14983 1001 aa9.05□□□□□ -0.96
HTT-209ENST00000512068 ZBTB24O43167 697 aaPredicted RBP9.05□□□□□ -0.96
HTT-209ENST00000512068 GAS7O60861 476 aa9.05□□□□□ -0.96
HTT-209ENST00000512068 PTMAP06454 111 aaKnown RBP9.05□□□□□ -0.96
HTT-209ENST00000512068 CETPP11597 493 aa9.05□□□□□ -0.96
HTT-209ENST00000512068 EIF2AK2P19525 551 aaKnown RBP9.05□□□□□ -0.96
HTT-209ENST00000512068 CCND2P30279 289 aa9.05□□□□□ -0.96
HTT-209ENST00000512068 CDC25AP30304 524 aa9.05□□□□□ -0.96
HTT-209ENST00000512068 HOXA7P31268 230 aaPredicted RBP9.05□□□□□ -0.96
HTT-209ENST00000512068 RPIAP49247 311 aa9.05□□□□□ -0.96
HTT-209ENST00000512068 GTF2A2P52657 109 aa9.05□□□□□ -0.96
HTT-209ENST00000512068 RPS6P62753 249 aaKnown RBP9.05□□□□□ -0.96
HTT-209ENST00000512068 STIM1Q13586 685 aa9.05□□□□□ -0.96
HTT-209ENST00000512068 TMEM132BQ14DG7 1078 aa9.05□□□□□ -0.96
HTT-209ENST00000512068 CEP55Q53EZ4 464 aa9.05□□□□□ -0.96
HTT-209ENST00000512068 MUM1L1Q5H9M0 696 aa9.05□□□□□ -0.96
HTT-209ENST00000512068 TREML2Q5T2D2 321 aa9.05□□□□□ -0.96
HTT-209ENST00000512068 LRCH2Q5VUJ6 765 aa9.05□□□□□ -0.96
HTT-209ENST00000512068 ISM2Q6H9L7 571 aa9.05□□□□□ -0.96
HTT-209ENST00000512068 XRRA1Q6P2D8 792 aa9.05□□□□□ -0.96
HTT-209ENST00000512068 SV2BQ7L1I2 683 aa9.05□□□□□ -0.96
HTT-209ENST00000512068 NLRX1Q86UT6 975 aa9.05□□□□□ -0.96
HTT-209ENST00000512068 GRAMD1CQ8IYS0 662 aa9.05□□□□□ -0.96
HTT-209ENST00000512068 ANKRD35Q8N283 1001 aa9.05□□□□□ -0.96
HTT-209ENST00000512068 CLEC4DQ8WXI8 215 aa9.05□□□□□ -0.96
HTT-209ENST00000512068 TBC1D5Q92609 795 aa9.05□□□□□ -0.96
HTT-209ENST00000512068 MBOAT7Q96N66 472 aa9.05□□□□□ -0.96
HTT-209ENST00000512068 GSDMAQ96QA5 445 aa9.05□□□□□ -0.96
HTT-209ENST00000512068 RMDN3Q96TC7 470 aa9.05□□□□□ -0.96
HTT-209ENST00000512068 PLIN2Q99541 437 aa9.05□□□□□ -0.96
HTT-209ENST00000512068 ZNF577Q9BSK1 485 aa9.05□□□□□ -0.96
HTT-209ENST00000512068 PAGR1Q9BTK6 254 aa9.05□□□□□ -0.96
HTT-209ENST00000512068 TEKT3Q9BXF9 490 aa9.05□□□□□ -0.96
HTT-209ENST00000512068 WDR11Q9BZH6 1224 aa9.05□□□□□ -0.96
HTT-209ENST00000512068 CBX8Q9HC52 389 aa9.05□□□□□ -0.96
HTT-209ENST00000512068 TUBE1Q9UJT0 475 aa9.05□□□□□ -0.96
HTT-209ENST00000512068 RLFQ13129 1914 aa9.05□□□□□ -0.96
HTT-209ENST00000512068 PFASO15067 1338 aa9.05□□□□□ -0.96
HTT-209ENST00000512068 A0A087X0B3 334 aa9.04□□□□□ -0.96
HTT-209ENST00000512068 ZBBXA8MT70 800 aa9.04□□□□□ -0.96
HTT-209ENST00000512068 FAM86B1E9PN63 330 aa9.04□□□□□ -0.96
HTT-209ENST00000512068 MSH4O15457 936 aa9.04□□□□□ -0.96
HTT-209ENST00000512068 SLC25A27O95847 323 aa9.04□□□□□ -0.96
HTT-209ENST00000512068 FAM86B2P0C5J1 330 aa9.04□□□□□ -0.96
HTT-209ENST00000512068 MYCLP12524 364 aaPredicted RBP9.04□□□□□ -0.96
HTT-209ENST00000512068 HERVK_113P62684 666 aa9.04□□□□□ -0.96
HTT-209ENST00000512068 ASIC1P78348 528 aa9.04□□□□□ -0.96
HTT-209ENST00000512068 GHRHRQ02643 423 aa9.04□□□□□ -0.96
HTT-209ENST00000512068 BAATQ14032 418 aaPredicted RBP9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms