RNA–Protein interactions for RNA: ENST00000512055.5

CPNE4-209, Transcript of copine 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CPNE4, Length 5,431 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-209ENST00000512055 PAK2Q13177 524 aa11.77□□□□□ -0.53
CPNE4-209ENST00000512055 KMT5BQ4FZB7 885 aa11.77□□□□□ -0.53
CPNE4-209ENST00000512055 SFMBT2Q5VUG0 894 aa11.77□□□□□ -0.53
CPNE4-209ENST00000512055 MTA3Q9BTC8 594 aa11.77□□□□□ -0.53
CPNE4-209ENST00000512055 NBPF3Q9H094 633 aa11.77□□□□□ -0.53
CPNE4-209ENST00000512055 SPATA31A5Q5VU36 1347 aa11.77□□□□□ -0.53
CPNE4-209ENST00000512055 SPATA31A7Q8IWB4 1347 aa11.77□□□□□ -0.53
CPNE4-209ENST00000512055 KRT3P12035 628 aa11.77□□□□□ -0.53
CPNE4-209ENST00000512055 FLOT2Q14254 428 aa11.77□□□□□ -0.53
CPNE4-209ENST00000512055 KLHL7Q8IXQ5 586 aa11.77□□□□□ -0.53
CPNE4-209ENST00000512055 P2RX5Q93086 422 aa11.77□□□□□ -0.53
CPNE4-209ENST00000512055 NOX5Q96PH1 765 aa11.77□□□□□ -0.53
CPNE4-209ENST00000512055 DCCP43146 1447 aa11.76□□□□□ -0.53
CPNE4-209ENST00000512055 MEIS1O00470 390 aa11.76□□□□□ -0.53
CPNE4-209ENST00000512055 GUCY2CP25092 1073 aa11.76□□□□□ -0.53
CPNE4-209ENST00000512055 CYP2J2P51589 502 aa11.76□□□□□ -0.53
CPNE4-209ENST00000512055 TSPY1Q01534 308 aa11.76□□□□□ -0.53
CPNE4-209ENST00000512055 COL9A3Q14050 684 aaPredicted RBP11.76□□□□□ -0.53
CPNE4-209ENST00000512055 USP49Q70CQ1 688 aa11.76□□□□□ -0.53
CPNE4-209ENST00000512055 METTL16Q86W50 562 aaKnown RBP11.76□□□□□ -0.53
CPNE4-209ENST00000512055 ZNF579Q8NAF0 562 aaKnown RBP11.76□□□□□ -0.53
CPNE4-209ENST00000512055 MAN1A1P33908 653 aa11.76□□□□□ -0.53
CPNE4-209ENST00000512055 PTPROQ16827 1216 aa11.76□□□□□ -0.53
CPNE4-209ENST00000512055 ARL6IP4Q66PJ3 421 aaKnown RBP11.76□□□□□ -0.53
CPNE4-209ENST00000512055 SCYL3Q8IZE3 742 aa11.76□□□□□ -0.53
CPNE4-209ENST00000512055 MPHOSPH6Q99547 160 aaKnown RBP11.76□□□□□ -0.53
CPNE4-209ENST00000512055 USP27XA6NNY8 438 aa11.76□□□□□ -0.53
CPNE4-209ENST00000512055 RCAN1P53805 252 aa11.76□□□□□ -0.53
CPNE4-209ENST00000512055 IQCB1Q15051 598 aa11.76□□□□□ -0.53
CPNE4-209ENST00000512055 FAM133BQ5BKY9 247 aaKnown RBP11.76□□□□□ -0.53
CPNE4-209ENST00000512055 C12orf60Q5U649 245 aa11.76□□□□□ -0.53
CPNE4-209ENST00000512055 RSBN1LQ6PCB5 846 aaPredicted RBP11.76□□□□□ -0.53
CPNE4-209ENST00000512055 TRIML2Q8N7C3 387 aa11.76□□□□□ -0.53
CPNE4-209ENST00000512055 ACRBPQ8NEB7 543 aa11.76□□□□□ -0.53
CPNE4-209ENST00000512055 CALR3Q96L12 384 aaKnown RBP11.76□□□□□ -0.53
CPNE4-209ENST00000512055 HINFPQ9BQA5 517 aa11.76□□□□□ -0.53
CPNE4-209ENST00000512055 PI4KBQ9UBF8 816 aa11.76□□□□□ -0.53
CPNE4-209ENST00000512055 ORC4O43929 436 aa11.76□□□□□ -0.53
CPNE4-209ENST00000512055 POLR2MP0CAP2 368 aa11.76□□□□□ -0.53
CPNE4-209ENST00000512055 ADAM9Q13443 819 aa11.76□□□□□ -0.53
CPNE4-209ENST00000512055 PPP2R5DQ14738 602 aa11.76□□□□□ -0.53
CPNE4-209ENST00000512055 KRT80Q6KB66 452 aa11.76□□□□□ -0.53
CPNE4-209ENST00000512055 SLFN12Q8IYM2 578 aa11.76□□□□□ -0.53
CPNE4-209ENST00000512055 FAM204AQ9H8W3 233 aa11.76□□□□□ -0.53
CPNE4-209ENST00000512055 TMEM260Q9NX78 707 aa11.76□□□□□ -0.53
CPNE4-209ENST00000512055 G3BP2Q9UN86 482 aaKnown RBP11.76□□□□□ -0.53
CPNE4-209ENST00000512055 BCS1LQ9Y276 419 aa11.76□□□□□ -0.53
CPNE4-209ENST00000512055 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.75□□□□□ -0.53
CPNE4-209ENST00000512055 SORBS3O60504 671 aa11.75□□□□□ -0.53
CPNE4-209ENST00000512055 STK10O94804 968 aaKnown RBP11.75□□□□□ -0.53
CPNE4-209ENST00000512055 POLR2FP61218 127 aaKnown RBP11.75□□□□□ -0.53
CPNE4-209ENST00000512055 RPS6KA2Q15349 733 aa11.75□□□□□ -0.53
CPNE4-209ENST00000512055 VWA3BQ502W6 1294 aa11.75□□□□□ -0.53
CPNE4-209ENST00000512055 MIGA2Q7L4E1 593 aa11.75□□□□□ -0.53
CPNE4-209ENST00000512055 WDR75Q8IWA0 830 aaKnown RBP11.75□□□□□ -0.53
CPNE4-209ENST00000512055 RWDD2AQ9UIY3 292 aa11.75□□□□□ -0.53
CPNE4-209ENST00000512055 BAG5Q9UL15 447 aa11.75□□□□□ -0.53
CPNE4-209ENST00000512055 COL5A2P05997 1499 aaPredicted RBP11.75□□□□□ -0.53
CPNE4-209ENST00000512055 TRIM49BA6NDI0 452 aa11.75□□□□□ -0.53
CPNE4-209ENST00000512055 ENC1O14682 589 aa11.75□□□□□ -0.53
CPNE4-209ENST00000512055 RGS16O15492 202 aaPredicted RBP11.75□□□□□ -0.53
CPNE4-209ENST00000512055 TNFAIP3P21580 790 aa11.75□□□□□ -0.53
CPNE4-209ENST00000512055 KRT31Q15323 416 aa11.75□□□□□ -0.53
CPNE4-209ENST00000512055 VPS72Q15906 364 aa11.75□□□□□ -0.53
CPNE4-209ENST00000512055 ARHGAP44Q17R89 818 aa11.75□□□□□ -0.53
CPNE4-209ENST00000512055 CC2D2BQ6DHV5 1058 aa11.75□□□□□ -0.53
CPNE4-209ENST00000512055 GJA10Q969M2 543 aa11.75□□□□□ -0.53
CPNE4-209ENST00000512055 KCNF1Q9H3M0 494 aa11.75□□□□□ -0.53
CPNE4-209ENST00000512055 CUEDC2Q9H467 287 aa11.75□□□□□ -0.53
CPNE4-209ENST00000512055 SAR1BQ9Y6B6 198 aa11.75□□□□□ -0.53
CPNE4-209ENST00000512055 C3P01024 1663 aa11.75□□□□□ -0.53
CPNE4-209ENST00000512055 XRCC5P13010 732 aaKnown RBP11.75□□□□□ -0.53
CPNE4-209ENST00000512055 NOP14P78316 857 aaKnown RBP11.75□□□□□ -0.53
CPNE4-209ENST00000512055 ANKRD20A4Q4UJ75 823 aa11.75□□□□□ -0.53
CPNE4-209ENST00000512055 TMEM259Q4ZIN3 620 aa11.75□□□□□ -0.53
CPNE4-209ENST00000512055 ANKRD20A8PQ5CZ79 823 aa11.75□□□□□ -0.53
CPNE4-209ENST00000512055 ANKRD20A2Q5SQ80 823 aa11.75□□□□□ -0.53
CPNE4-209ENST00000512055 ANKRD20A1Q5TYW2 823 aa11.75□□□□□ -0.53
CPNE4-209ENST00000512055 PRR5LQ6MZQ0 368 aa11.75□□□□□ -0.53
CPNE4-209ENST00000512055 ST13P4Q8IZP2 240 aaPredicted RBP11.75□□□□□ -0.53
CPNE4-209ENST00000512055 PPWD1Q96BP3 646 aaKnown RBP11.75□□□□□ -0.53
CPNE4-209ENST00000512055 KRT82Q9NSB4 513 aa11.75□□□□□ -0.53
CPNE4-209ENST00000512055 ARMCX3Q9UH62 379 aaPredicted RBP11.75□□□□□ -0.53
CPNE4-209ENST00000512055 TESPA1A2RU30 521 aaPredicted RBP11.75□□□□□ -0.53
CPNE4-209ENST00000512055 HOXA13P31271 388 aaPredicted RBP11.75□□□□□ -0.53
CPNE4-209ENST00000512055 TMED10P49755 219 aaKnown RBP11.75□□□□□ -0.53
CPNE4-209ENST00000512055 PSMC1P62191 440 aaKnown RBP11.75□□□□□ -0.53
CPNE4-209ENST00000512055 CDR2Q01850 454 aa11.75□□□□□ -0.53
CPNE4-209ENST00000512055 OCA2Q04671 838 aa11.75□□□□□ -0.53
CPNE4-209ENST00000512055 MAP7D3Q8IWC1 876 aa11.75□□□□□ -0.53
CPNE4-209ENST00000512055 SLC35F6Q8N357 371 aa11.75□□□□□ -0.53
CPNE4-209ENST00000512055 DHTKD1Q96HY7 919 aaPredicted RBP11.75□□□□□ -0.53
CPNE4-209ENST00000512055 ASIC3Q9UHC3 531 aa11.75□□□□□ -0.53
CPNE4-209ENST00000512055 POTEMA6NI47 508 aa11.74□□□□□ -0.53
CPNE4-209ENST00000512055 ZBED4O75132 1171 aa11.74□□□□□ -0.53
CPNE4-209ENST00000512055 KRT5P13647 590 aa11.74□□□□□ -0.53
CPNE4-209ENST00000512055 CCDC15Q0P6D6 951 aa11.74□□□□□ -0.53
CPNE4-209ENST00000512055 BIRC3Q13489 604 aa11.74□□□□□ -0.53
CPNE4-209ENST00000512055 DYDC2Q96IM9 177 aa11.74□□□□□ -0.53
CPNE4-209ENST00000512055 GTPBP10A4D1E9 387 aaKnown RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms