RNA–Protein interactions for RNA: ENST00000511615.5

SUB1-209, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 1 (best)

Gene SUB1, Length 1,658 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-209ENST00000511615 BMP3P12645 472 aa10.44□□□□□ -0.74
SUB1-209ENST00000511615 VAV2P52735 878 aa10.44□□□□□ -0.74
SUB1-209ENST00000511615 HERVK_113P62684 666 aa10.44□□□□□ -0.74
SUB1-209ENST00000511615 KLRC3Q07444 240 aa10.44□□□□□ -0.74
SUB1-209ENST00000511615 IKQ13123 557 aaPredicted RBP10.44□□□□□ -0.74
SUB1-209ENST00000511615 SUPT20HL1Q3ZLR7 823 aa10.44□□□□□ -0.74
SUB1-209ENST00000511615 IQCEQ6IPM2 695 aa10.44□□□□□ -0.74
SUB1-209ENST00000511615 DNAJC19Q96DA6 116 aa10.44□□□□□ -0.74
SUB1-209ENST00000511615 FAM20AQ96MK3 541 aa10.44□□□□□ -0.74
SUB1-209ENST00000511615 NUDT12Q9BQG2 462 aa10.44□□□□□ -0.74
SUB1-209ENST00000511615 DEF6Q9H4E7 631 aa10.44□□□□□ -0.74
SUB1-209ENST00000511615 MMRN2Q9H8L6 949 aa10.44□□□□□ -0.74
SUB1-209ENST00000511615 KCNMB3Q9NPA1 279 aa10.44□□□□□ -0.74
SUB1-209ENST00000511615 LUC7LQ9NQ29 371 aaKnown RBP10.44□□□□□ -0.74
SUB1-209ENST00000511615 AGPAT5Q9NUQ2 364 aa10.44□□□□□ -0.74
SUB1-209ENST00000511615 FAM184BQ9ULE4 1060 aa10.44□□□□□ -0.74
SUB1-209ENST00000511615 KIAA1024Q9UPX6 916 aa10.44□□□□□ -0.74
SUB1-209ENST00000511615 REXO2Q9Y3B8 237 aaKnown RBP10.44□□□□□ -0.74
SUB1-209ENST00000511615 COL4A3BPQ9Y5P4 624 aa10.44□□□□□ -0.74
SUB1-209ENST00000511615 SIPA1L1O43166 1804 aa10.44□□□□□ -0.74
SUB1-209ENST00000511615 A0A0U1RQJ8 604 aa10.44□□□□□ -0.74
SUB1-209ENST00000511615 RASSF10A6NK89 507 aa10.44□□□□□ -0.74
SUB1-209ENST00000511615 FAM196BA6NMK8 535 aa10.44□□□□□ -0.74
SUB1-209ENST00000511615 USP17L15C9J2P7 530 aa10.44□□□□□ -0.74
SUB1-209ENST00000511615 USP17L13C9JLJ4 530 aa10.44□□□□□ -0.74
SUB1-209ENST00000511615 USP17L11C9JVI0 530 aa10.44□□□□□ -0.74
SUB1-209ENST00000511615 USP17L18D6R9N7 530 aa10.44□□□□□ -0.74
SUB1-209ENST00000511615 USP17L22D6RA61 530 aa10.44□□□□□ -0.74
SUB1-209ENST00000511615 USP17L17D6RBQ6 530 aa10.44□□□□□ -0.74
SUB1-209ENST00000511615 USP17L19D6RCP7 530 aa10.44□□□□□ -0.74
SUB1-209ENST00000511615 USP17L20D6RJB6 530 aa10.44□□□□□ -0.74
SUB1-209ENST00000511615 TRAF5O00463 557 aa10.44□□□□□ -0.74
SUB1-209ENST00000511615 TACC1O75410 805 aa10.44□□□□□ -0.74
SUB1-209ENST00000511615 ASNSP08243 561 aa10.44□□□□□ -0.74
SUB1-209ENST00000511615 EPHX2P34913 555 aa10.44□□□□□ -0.74
SUB1-209ENST00000511615 ARHGAP4P98171 946 aa10.44□□□□□ -0.74
SUB1-209ENST00000511615 USP17L24Q0WX57 530 aa10.44□□□□□ -0.74
SUB1-209ENST00000511615 NBPF12Q5TAG4 269 aaPredicted RBP10.44□□□□□ -0.74
SUB1-209ENST00000511615 PAPD7Q5XG87 772 aaKnown RBP10.44□□□□□ -0.74
SUB1-209ENST00000511615 DCAF15Q66K64 600 aa10.44□□□□□ -0.74
SUB1-209ENST00000511615 USP17L6PQ6QN14 398 aa10.44□□□□□ -0.74
SUB1-209ENST00000511615 BTNL9Q6UXG8 535 aa10.44□□□□□ -0.74
SUB1-209ENST00000511615 MIGA2Q7L4E1 593 aa10.44□□□□□ -0.74
SUB1-209ENST00000511615 CACNA2D4Q7Z3S7 1137 aa10.44□□□□□ -0.74
SUB1-209ENST00000511615 PNMA8AQ86V59 439 aaPredicted RBP10.44□□□□□ -0.74
SUB1-209ENST00000511615 GPBP1Q86WP2 473 aa10.44□□□□□ -0.74
SUB1-209ENST00000511615 ATRIPQ8WXE1 791 aa10.44□□□□□ -0.74
SUB1-209ENST00000511615 SECISBP2LQ93073 1101 aaKnown RBP10.44□□□□□ -0.74
SUB1-209ENST00000511615 HPS3Q969F9 1004 aa10.44□□□□□ -0.74
SUB1-209ENST00000511615 TANGO6Q9C0B7 1094 aa10.44□□□□□ -0.74
SUB1-209ENST00000511615 TAF1DQ9H5J8 278 aaPredicted RBP10.44□□□□□ -0.74
SUB1-209ENST00000511615 GGA3Q9NZ52 723 aa10.44□□□□□ -0.74
SUB1-209ENST00000511615 RAB21Q9UL25 225 aa10.44□□□□□ -0.74
SUB1-209ENST00000511615 PLAGL2Q9UPG8 496 aa10.44□□□□□ -0.74
SUB1-209ENST00000511615 DNM3Q9UQ16 869 aa10.44□□□□□ -0.74
SUB1-209ENST00000511615 SIK3Q9Y2K2 1263 aa10.44□□□□□ -0.74
SUB1-209ENST00000511615 TMX2Q9Y320 296 aa10.44□□□□□ -0.74
SUB1-209ENST00000511615 SAR1BQ9Y6B6 198 aa10.44□□□□□ -0.74
SUB1-209ENST00000511615 GREB1LQ9C091 1923 aaPredicted RBP10.43□□□□□ -0.74
SUB1-209ENST00000511615 EIF3JO75822 258 aaKnown RBP10.43□□□□□ -0.74
SUB1-209ENST00000511615 GH2P01242 217 aa10.43□□□□□ -0.74
SUB1-209ENST00000511615 ATXN8OSP0DMR3 200 aa10.43□□□□□ -0.74
SUB1-209ENST00000511615 AMPD2Q01433 879 aa10.43□□□□□ -0.74
SUB1-209ENST00000511615 HERC4Q5GLZ8 1057 aaPredicted RBP10.43□□□□□ -0.74
SUB1-209ENST00000511615 CCDC70Q6NSX1 233 aa10.43□□□□□ -0.74
SUB1-209ENST00000511615 LRRC55Q6ZSA7 311 aa10.43□□□□□ -0.74
SUB1-209ENST00000511615 ZNF771Q7L3S4 317 aaPredicted RBP10.43□□□□□ -0.74
SUB1-209ENST00000511615 TRAPPC11Q7Z392 1133 aa10.43□□□□□ -0.74
SUB1-209ENST00000511615 KCNK18Q7Z418 384 aa10.43□□□□□ -0.74
SUB1-209ENST00000511615 SYN2Q92777 582 aaPredicted RBP10.43□□□□□ -0.74
SUB1-209ENST00000511615 ACBD3Q9H3P7 528 aa10.43□□□□□ -0.74
SUB1-209ENST00000511615 ZSWIM4Q9H7M6 989 aa10.43□□□□□ -0.74
SUB1-209ENST00000511615 EHMT1Q9H9B1 1298 aa10.43□□□□□ -0.74
SUB1-209ENST00000511615 ARHGEF10LQ9HCE6 1279 aa10.43□□□□□ -0.74
SUB1-209ENST00000511615 ZBTB21Q9ULJ3 1066 aa10.43□□□□□ -0.74
SUB1-209ENST00000511615 E9PMD0 336 aa10.42□□□□□ -0.74
SUB1-209ENST00000511615 MEIS2O14770 477 aa10.42□□□□□ -0.74
SUB1-209ENST00000511615 CETN3O15182 167 aa10.42□□□□□ -0.74
SUB1-209ENST00000511615 AKR1B10O60218 316 aa10.42□□□□□ -0.74
SUB1-209ENST00000511615 NDUFB10O96000 172 aa10.42□□□□□ -0.74
SUB1-209ENST00000511615 CIITAP33076 1130 aa10.42□□□□□ -0.74
SUB1-209ENST00000511615 ZNF76P36508 570 aa10.42□□□□□ -0.74
SUB1-209ENST00000511615 SREBF1P36956 1147 aa10.42□□□□□ -0.74
SUB1-209ENST00000511615 PLA2G4AP47712 749 aa10.42□□□□□ -0.74
SUB1-209ENST00000511615 KLK7P49862 253 aa10.42□□□□□ -0.74
SUB1-209ENST00000511615 MARSP56192 900 aaKnown RBP10.42□□□□□ -0.74
SUB1-209ENST00000511615 LRRC41Q15345 812 aa10.42□□□□□ -0.74
SUB1-209ENST00000511615 TERF2Q15554 542 aa10.42□□□□□ -0.74
SUB1-209ENST00000511615 ECM1Q16610 540 aa10.42□□□□□ -0.74
SUB1-209ENST00000511615 EDRF1Q3B7T1 1238 aa10.42□□□□□ -0.74
SUB1-209ENST00000511615 HDXQ7Z353 690 aa10.42□□□□□ -0.74
SUB1-209ENST00000511615 MSL3Q8N5Y2 521 aaKnown RBP10.42□□□□□ -0.74
SUB1-209ENST00000511615 TRIM58Q8NG06 486 aa10.42□□□□□ -0.74
SUB1-209ENST00000511615 DCPSQ96C86 337 aaKnown RBP10.42□□□□□ -0.74
SUB1-209ENST00000511615 KLRG1Q96E93 195 aa10.42□□□□□ -0.74
SUB1-209ENST00000511615 ALS2CR12Q96Q35 445 aa10.42□□□□□ -0.74
SUB1-209ENST00000511615 ZNF341Q9BYN7 854 aa10.42□□□□□ -0.74
SUB1-209ENST00000511615 SSU72P8A0A1W2PR75 194 aa10.41□□□□□ -0.74
SUB1-209ENST00000511615 A0A1W2PRG0 241 aa10.41□□□□□ -0.74
SUB1-209ENST00000511615 CALUO43852 315 aaPredicted RBP10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms