RNA–Protein interactions for RNA: ENST00000510310.1

SEC31A-231, Transcript of SEC31 homolog A, COPII coat complex component, human

TSL 4

Gene SEC31A, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC31A-231	ENST00000510310	SAMM50	Q9Y512	469 aa		27.64	■■■□□ 2.02
SEC31A-231	ENST00000510310	NOP56	O00567	594 aa	Known RBP	27.63	■■■□□ 2.01
SEC31A-231	ENST00000510310	SEPT4	O43236	478 aa		27.63	■■■□□ 2.01
SEC31A-231	ENST00000510310	INHA	P05111	366 aa		27.63	■■■□□ 2.01
SEC31A-231	ENST00000510310	SMPD1	P17405	629 aa		27.63	■■■□□ 2.01
SEC31A-231	ENST00000510310	CNGA1	P29973	690 aa		27.63	■■■□□ 2.01
SEC31A-231	ENST00000510310	EPHA7	Q15375	998 aa		27.63	■■■□□ 2.01
SEC31A-231	ENST00000510310	MAP3K21	Q5TCX8	1036 aa		27.63	■■■□□ 2.01
SEC31A-231	ENST00000510310	RESP18	Q5W5W9	173 aa		27.63	■■■□□ 2.01
SEC31A-231	ENST00000510310	EMID1	Q96A84	441 aa	Predicted RBP	27.63	■■■□□ 2.01
SEC31A-231	ENST00000510310	LMBRD1	Q9NUN5	540 aa		27.63	■■■□□ 2.01
SEC31A-231	ENST00000510310	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	27.62	■■■□□ 2.01
SEC31A-231	ENST00000510310	TRIM32	Q13049	653 aa		27.62	■■■□□ 2.01
SEC31A-231	ENST00000510310	MIS18BP1	Q6P0N0	1132 aa		27.62	■■■□□ 2.01
SEC31A-231	ENST00000510310	SHC4	Q6S5L8	630 aa		27.62	■■■□□ 2.01
SEC31A-231	ENST00000510310	TRPV1	Q8NER1	839 aa		27.62	■■■□□ 2.01
SEC31A-231	ENST00000510310	OR6J1	Q8NGC5	347 aa		27.62	■■■□□ 2.01
SEC31A-231	ENST00000510310	RASSF8	Q8NHQ8	419 aa		27.62	■■■□□ 2.01
SEC31A-231	ENST00000510310	SYMPK	Q92797	1274 aa	Known RBP	27.62	■■■□□ 2.01
SEC31A-231	ENST00000510310	CCSER1	Q9C0I3	900 aa		27.62	■■■□□ 2.01
SEC31A-231	ENST00000510310	DISC1	Q9NRI5	854 aa		27.62	■■■□□ 2.01
SEC31A-231	ENST00000510310	CCDC39	Q9UFE4	941 aa		27.62	■■■□□ 2.01
SEC31A-231	ENST00000510310	PSAP	P07602	524 aa		27.61	■■■□□ 2.01
SEC31A-231	ENST00000510310	ACTR2	P61160	394 aa		27.61	■■■□□ 2.01
SEC31A-231	ENST00000510310	ARHGAP1	Q07960	439 aa		27.61	■■■□□ 2.01
SEC31A-231	ENST00000510310	SLC9C1	Q4G0N8	1177 aa		27.61	■■■□□ 2.01
SEC31A-231	ENST00000510310	TPRN	Q4KMQ1	711 aa		27.61	■■■□□ 2.01
SEC31A-231	ENST00000510310	CCDC73	Q6ZRK6	1079 aa		27.61	■■■□□ 2.01
SEC31A-231	ENST00000510310	CABP7	Q86V35	215 aa		27.61	■■■□□ 2.01
SEC31A-231	ENST00000510310	FSIP1	Q8NA03	581 aa		27.61	■■■□□ 2.01
SEC31A-231	ENST00000510310	SNX29	Q8TEQ0	813 aa		27.61	■■■□□ 2.01
SEC31A-231	ENST00000510310	COPS5	Q92905	334 aa		27.61	■■■□□ 2.01
SEC31A-231	ENST00000510310	CALML4	Q96GE6	196 aa		27.61	■■■□□ 2.01
SEC31A-231	ENST00000510310	SPATA33	Q96N06	139 aa		27.61	■■■□□ 2.01
SEC31A-231	ENST00000510310	PYM1	Q9BRP8	204 aa	Known RBP	27.61	■■■□□ 2.01
SEC31A-231	ENST00000510310	AP5M1	Q9H0R1	490 aa		27.61	■■■□□ 2.01
SEC31A-231	ENST00000510310	PCDHA10	Q9Y5I2	948 aa		27.61	■■■□□ 2.01
SEC31A-231	ENST00000510310	KDM3A	Q9Y4C1	1321 aa		27.61	■■■□□ 2.01
SEC31A-231	ENST00000510310	SORBS3	O60504	671 aa		27.6	■■■□□ 2.01
SEC31A-231	ENST00000510310	CCNE2	O96020	404 aa		27.6	■■■□□ 2.01
SEC31A-231	ENST00000510310	SP4	Q02446	784 aa		27.6	■■■□□ 2.01
SEC31A-231	ENST00000510310	SPECC1	Q5M775	1068 aa		27.6	■■■□□ 2.01
SEC31A-231	ENST00000510310	SEPT1	Q8WYJ6	367 aa		27.6	■■■□□ 2.01
SEC31A-231	ENST00000510310	CDK5RAP3	Q96JB5	506 aa		27.6	■■■□□ 2.01
SEC31A-231	ENST00000510310	HMX1	Q9NP08	348 aa	Predicted RBP	27.6	■■■□□ 2.01
SEC31A-231	ENST00000510310	GNE	Q9Y223	722 aa	Known RBP	27.6	■■■□□ 2.01
SEC31A-231	ENST00000510310	PDE4DIP	Q5VU43	2346 aa		27.59	■■■□□ 2.01
SEC31A-231	ENST00000510310	EML1	O00423	815 aa		27.59	■■■□□ 2.01
SEC31A-231	ENST00000510310	MSC	O60682	206 aa		27.59	■■■□□ 2.01
SEC31A-231	ENST00000510310	DKC1	O60832	514 aa	Known RBP eCLIP	27.59	■■■□□ 2.01
SEC31A-231	ENST00000510310	GADD45B	O75293	160 aa	Predicted RBP	27.59	■■■□□ 2.01
SEC31A-231	ENST00000510310	DUSP11	O75319	330 aa	Known RBP	27.59	■■■□□ 2.01
SEC31A-231	ENST00000510310	CCT6A	P40227	531 aa	Known RBP	27.59	■■■□□ 2.01
SEC31A-231	ENST00000510310	BRDT	Q58F21	947 aa	Predicted RBP	27.59	■■■□□ 2.01
SEC31A-231	ENST00000510310	TLK2	Q86UE8	772 aa		27.59	■■■□□ 2.01
SEC31A-231	ENST00000510310	PPTC7	Q8NI37	304 aa		27.59	■■■□□ 2.01
SEC31A-231	ENST00000510310	EPSTI1	Q96J88	318 aa		27.59	■■■□□ 2.01
SEC31A-231	ENST00000510310	EIF2AK1	Q9BQI3	630 aa	Known RBP	27.59	■■■□□ 2.01
SEC31A-231	ENST00000510310	TUFT1	Q9NNX1	390 aa		27.59	■■■□□ 2.01
SEC31A-231	ENST00000510310	PP2D1	A8MPX8	630 aa		27.58	■■■□□ 2.01
SEC31A-231	ENST00000510310	RARB	P10826	455 aa		27.58	■■■□□ 2.01
SEC31A-231	ENST00000510310	MUT	P22033	750 aa		27.58	■■■□□ 2.01
SEC31A-231	ENST00000510310	POLR3C	Q9BUI4	534 aa	Predicted RBP	27.58	■■■□□ 2.01
SEC31A-231	ENST00000510310	NT5C3A	Q9H0P0	336 aa		27.58	■■■□□ 2.01
SEC31A-231	ENST00000510310	BCAS3	Q9H6U6	928 aa		27.58	■■■□□ 2.01
SEC31A-231	ENST00000510310	SPC25	Q9HBM1	224 aa		27.58	■■■□□ 2.01
SEC31A-231	ENST00000510310	FAM237A	A0A1B0GTK4	181 aa		27.57	■■■□□ 2
SEC31A-231	ENST00000510310	DYNC1LI2	O43237	492 aa	Predicted RBP	27.57	■■■□□ 2
SEC31A-231	ENST00000510310	ATG7	O95352	703 aa		27.57	■■■□□ 2
SEC31A-231	ENST00000510310	MBD3	O95983	291 aa		27.57	■■■□□ 2
SEC31A-231	ENST00000510310	P4HB	P07237	508 aa	Known RBP	27.57	■■■□□ 2
SEC31A-231	ENST00000510310	SUPT20HL2	P0C7V6	817 aa		27.57	■■■□□ 2
SEC31A-231	ENST00000510310	PFKFB1	P16118	471 aa		27.57	■■■□□ 2
SEC31A-231	ENST00000510310	RPA1	P27694	616 aa		27.57	■■■□□ 2
SEC31A-231	ENST00000510310	CCND3	P30281	292 aa	Predicted RBP	27.57	■■■□□ 2
SEC31A-231	ENST00000510310	GJC2	Q5T442	439 aa	Predicted RBP	27.57	■■■□□ 2
SEC31A-231	ENST00000510310	FAM160B1	Q5W0V3	765 aa		27.57	■■■□□ 2
SEC31A-231	ENST00000510310	KCTD17	Q8N5Z5	321 aa		27.57	■■■□□ 2
SEC31A-231	ENST00000510310	GPR20	Q99678	358 aa		27.57	■■■□□ 2
SEC31A-231	ENST00000510310	KCNH3	Q9ULD8	1083 aa		27.57	■■■□□ 2
SEC31A-231	ENST00000510310		A0A1B0GVL5	298 aa		27.56	■■■□□ 2
SEC31A-231	ENST00000510310	ADCY6	O43306	1168 aa		27.56	■■■□□ 2
SEC31A-231	ENST00000510310	CDC25A	P30304	524 aa		27.56	■■■□□ 2
SEC31A-231	ENST00000510310	CPT1A	P50416	773 aa		27.56	■■■□□ 2
SEC31A-231	ENST00000510310	TMEM63B	Q5T3F8	832 aa		27.56	■■■□□ 2
SEC31A-231	ENST00000510310	ABHD15	Q6UXT9	468 aa		27.56	■■■□□ 2
SEC31A-231	ENST00000510310	SH3TC2	Q8TF17	1288 aa		27.56	■■■□□ 2
SEC31A-231	ENST00000510310	ATP6V0A1	Q93050	837 aa		27.56	■■■□□ 2
SEC31A-231	ENST00000510310	DDX20	Q9UHI6	824 aa	Known RBP	27.56	■■■□□ 2
SEC31A-231	ENST00000510310	BACH1	O14867	736 aa		27.55	■■■□□ 2
SEC31A-231	ENST00000510310	TCF7	P36402	384 aa	Predicted RBP	27.55	■■■□□ 2
SEC31A-231	ENST00000510310	SYK	P43405	635 aa		27.55	■■■□□ 2
SEC31A-231	ENST00000510310	FAM160A1	Q05DH4	1040 aa		27.55	■■■□□ 2
SEC31A-231	ENST00000510310	NFKBIB	Q15653	356 aa		27.55	■■■□□ 2
SEC31A-231	ENST00000510310	ZRSR1	Q15695	479 aa	Known RBP	27.55	■■■□□ 2
SEC31A-231	ENST00000510310	HSDL1	Q3SXM5	330 aa		27.55	■■■□□ 2
SEC31A-231	ENST00000510310	USP49	Q70CQ1	688 aa		27.55	■■■□□ 2
SEC31A-231	ENST00000510310	AFG1L	Q8WV93	481 aa		27.55	■■■□□ 2
SEC31A-231	ENST00000510310	DYDC2	Q96IM9	177 aa		27.55	■■■□□ 2
SEC31A-231	ENST00000510310	HSD17B14	Q9BPX1	270 aa		27.55	■■■□□ 2

Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms