RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 NOP56O00567 594 aaKnown RBP15.45■□□□□ 0.06
SNF8-206ENST00000509989 WNT7AO00755 349 aa15.45■□□□□ 0.06
SNF8-206ENST00000509989 GUCY1B3Q02153 619 aa15.45■□□□□ 0.06
SNF8-206ENST00000509989 NR5A1Q13285 461 aa15.45■□□□□ 0.06
SNF8-206ENST00000509989 GPNMBQ14956 572 aa15.45■□□□□ 0.06
SNF8-206ENST00000509989 PTGISQ16647 500 aa15.45■□□□□ 0.06
SNF8-206ENST00000509989 INF2Q27J81 1249 aa15.45■□□□□ 0.06
SNF8-206ENST00000509989 PRR16Q569H4 304 aa15.45■□□□□ 0.06
SNF8-206ENST00000509989 MFSD5Q6N075 450 aa15.45■□□□□ 0.06
SNF8-206ENST00000509989 TDHQ8IZJ6 230 aa15.45■□□□□ 0.06
SNF8-206ENST00000509989 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.45■□□□□ 0.06
SNF8-206ENST00000509989 BACH2Q9BYV9 841 aa15.45■□□□□ 0.06
SNF8-206ENST00000509989 TUT1Q9H6E5 874 aaKnown RBP15.45■□□□□ 0.06
SNF8-206ENST00000509989 GTF2IRD1Q9UHL9 959 aa15.45■□□□□ 0.06
SNF8-206ENST00000509989 EIF5BO60841 1220 aaKnown RBP15.44■□□□□ 0.06
SNF8-206ENST00000509989 CDKL5O76039 1030 aa15.44■□□□□ 0.06
SNF8-206ENST00000509989 SMIM10L2AP0DMW4 78 aa15.44■□□□□ 0.06
SNF8-206ENST00000509989 SMIM10L2BP0DMW5 78 aa15.44■□□□□ 0.06
SNF8-206ENST00000509989 MARK3P27448 753 aa15.44■□□□□ 0.06
SNF8-206ENST00000509989 CIITAP33076 1130 aa15.44■□□□□ 0.06
SNF8-206ENST00000509989 ACTR2P61160 394 aa15.44■□□□□ 0.06
SNF8-206ENST00000509989 FPGSQ05932 587 aa15.44■□□□□ 0.06
SNF8-206ENST00000509989 TCTN1Q2MV58 587 aa15.44■□□□□ 0.06
SNF8-206ENST00000509989 TRIM71Q2Q1W2 868 aaKnown RBP15.44■□□□□ 0.06
SNF8-206ENST00000509989 SESTD1Q86VW0 696 aa15.44■□□□□ 0.06
SNF8-206ENST00000509989 TNFRSF25Q93038 417 aa15.44■□□□□ 0.06
SNF8-206ENST00000509989 SETD4Q9NVD3 440 aa15.44■□□□□ 0.06
SNF8-206ENST00000509989 SLC9A2Q9UBY0 812 aa15.44■□□□□ 0.06
SNF8-206ENST00000509989 MSH4O15457 936 aa15.43■□□□□ 0.06
SNF8-206ENST00000509989 TREHO43280 583 aa15.43■□□□□ 0.06
SNF8-206ENST00000509989 PTPN11Q06124 597 aaPredicted RBP15.43■□□□□ 0.06
SNF8-206ENST00000509989 FAM109BQ6ICB4 259 aaPredicted RBP15.43■□□□□ 0.06
SNF8-206ENST00000509989 TRAF7Q6Q0C0 670 aa15.43■□□□□ 0.06
SNF8-206ENST00000509989 C7orf31Q8N865 590 aa15.43■□□□□ 0.06
SNF8-206ENST00000509989 BICD2Q8TD16 824 aa15.43■□□□□ 0.06
SNF8-206ENST00000509989 SEPT1Q8WYJ6 367 aa15.43■□□□□ 0.06
SNF8-206ENST00000509989 JPH1Q9HDC5 661 aaPredicted RBP15.43■□□□□ 0.06
SNF8-206ENST00000509989 NFASCO94856 1347 aa15.43■□□□□ 0.06
SNF8-206ENST00000509989 MAFGO15525 162 aa15.42■□□□□ 0.06
SNF8-206ENST00000509989 SLC37A4O43826 429 aa15.42■□□□□ 0.06
SNF8-206ENST00000509989 HOXC8P31273 242 aa15.42■□□□□ 0.06
SNF8-206ENST00000509989 RABEP1Q15276 862 aa15.42■□□□□ 0.06
SNF8-206ENST00000509989 TMEM240Q5SV17 173 aa15.42■□□□□ 0.06
SNF8-206ENST00000509989 KRT40Q6A162 431 aa15.42■□□□□ 0.06
SNF8-206ENST00000509989 PIK3AP1Q6ZUJ8 805 aa15.42■□□□□ 0.06
SNF8-206ENST00000509989 ZNF365Q70YC5 407 aa15.42■□□□□ 0.06
SNF8-206ENST00000509989 NIPA1Q7RTP0 329 aa15.42■□□□□ 0.06
SNF8-206ENST00000509989 TEX2Q8IWB9 1127 aa15.42■□□□□ 0.06
SNF8-206ENST00000509989 CDHR1Q96JP9 859 aa15.42■□□□□ 0.06
SNF8-206ENST00000509989 ZNF577Q9BSK1 485 aa15.42■□□□□ 0.06
SNF8-206ENST00000509989 GRXCR1A8MXD5 290 aa15.41■□□□□ 0.06
SNF8-206ENST00000509989 BTBD18B2RXH4 712 aa15.41■□□□□ 0.06
SNF8-206ENST00000509989 IPO5O00410 1097 aaKnown RBP15.41■□□□□ 0.06
SNF8-206ENST00000509989 LGR5O75473 907 aa15.41■□□□□ 0.06
SNF8-206ENST00000509989 ATG7O95352 703 aa15.41■□□□□ 0.06
SNF8-206ENST00000509989 ATP4AP20648 1035 aa15.41■□□□□ 0.06
SNF8-206ENST00000509989 ADAM17P78536 824 aa15.41■□□□□ 0.06
SNF8-206ENST00000509989 MBTPS1Q14703 1052 aa15.41■□□□□ 0.06
SNF8-206ENST00000509989 RUFY4Q6ZNE9 571 aa15.41■□□□□ 0.06
SNF8-206ENST00000509989 DEFB128Q7Z7B8 93 aa15.41■□□□□ 0.06
SNF8-206ENST00000509989 CCDC60Q8IWA6 550 aaPredicted RBP15.41■□□□□ 0.06
SNF8-206ENST00000509989 GIMAP8Q8ND71 665 aaPredicted RBP15.41■□□□□ 0.06
SNF8-206ENST00000509989 LMBR1Q8WVP7 490 aa15.41■□□□□ 0.06
SNF8-206ENST00000509989 TRAPPC12Q8WVT3 735 aa15.41■□□□□ 0.06
SNF8-206ENST00000509989 SDF4Q9BRK5 362 aa15.41■□□□□ 0.06
SNF8-206ENST00000509989 KATNAL1Q9BW62 490 aa15.41■□□□□ 0.06
SNF8-206ENST00000509989 CXXC1Q9P0U4 656 aaPredicted RBP15.41■□□□□ 0.06
SNF8-206ENST00000509989 C17orf102A2RUQ5 167 aa15.4■□□□□ 0.06
SNF8-206ENST00000509989 IQCF3P0C7M6 154 aa15.4■□□□□ 0.06
SNF8-206ENST00000509989 USP11P51784 963 aa15.4■□□□□ 0.06
SNF8-206ENST00000509989 NONOQ15233 471 aaKnown RBP eCLIP15.4■□□□□ 0.06
SNF8-206ENST00000509989 MARCH8Q5T0T0 291 aa15.4■□□□□ 0.06
SNF8-206ENST00000509989 ABHD15Q6UXT9 468 aa15.4■□□□□ 0.06
SNF8-206ENST00000509989 TMX3Q96JJ7 454 aa15.4■□□□□ 0.06
SNF8-206ENST00000509989 MBOAT7Q96N66 472 aa15.4■□□□□ 0.06
SNF8-206ENST00000509989 SEZ6LQ9BYH1 1024 aa15.4■□□□□ 0.06
SNF8-206ENST00000509989 IL23AQ9NPF7 189 aa15.4■□□□□ 0.06
SNF8-206ENST00000509989 NOD1Q9Y239 953 aa15.4■□□□□ 0.06
SNF8-206ENST00000509989 CYP3A7-CYP3A51PA0A087WV96 503 aa15.39■□□□□ 0.05
SNF8-206ENST00000509989 IGKV6D-21A0A0A0MT36 114 aa15.39■□□□□ 0.05
SNF8-206ENST00000509989 A0A1W2PPC1 479 aa15.39■□□□□ 0.05
SNF8-206ENST00000509989 MMP1P03956 469 aa15.39■□□□□ 0.05
SNF8-206ENST00000509989 SUPT20HL2P0C7V6 817 aa15.39■□□□□ 0.05
SNF8-206ENST00000509989 CKBP12277 381 aa15.39■□□□□ 0.05
SNF8-206ENST00000509989 CYP3A7P24462 503 aa15.39■□□□□ 0.05
SNF8-206ENST00000509989 PLCB4Q15147 1175 aa15.39■□□□□ 0.05
SNF8-206ENST00000509989 UGCGQ16739 394 aa15.39■□□□□ 0.05
SNF8-206ENST00000509989 LETM2Q2VYF4 491 aa15.39■□□□□ 0.05
SNF8-206ENST00000509989 ZNF618Q5T7W0 954 aa15.39■□□□□ 0.05
SNF8-206ENST00000509989 MCTP2Q6DN12 878 aa15.39■□□□□ 0.05
SNF8-206ENST00000509989 GALNT17Q6IS24 598 aa15.39■□□□□ 0.05
SNF8-206ENST00000509989 Q7L0L9 218 aa15.39■□□□□ 0.05
SNF8-206ENST00000509989 TRMT1LQ7Z2T5 733 aaKnown RBP15.39■□□□□ 0.05
SNF8-206ENST00000509989 KRT25Q7Z3Z0 450 aa15.39■□□□□ 0.05
SNF8-206ENST00000509989 SERINC5Q86VE9 423 aa15.39■□□□□ 0.05
SNF8-206ENST00000509989 DIS3L2Q8IYB7 885 aaKnown RBP15.39■□□□□ 0.05
SNF8-206ENST00000509989 TMEM199Q8N511 208 aa15.39■□□□□ 0.05
SNF8-206ENST00000509989 GLG1Q92896 1179 aa15.39■□□□□ 0.05
SNF8-206ENST00000509989 SLC5A5Q92911 643 aa15.39■□□□□ 0.05
SNF8-206ENST00000509989 ATP6V0A1Q93050 837 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms