RNA–Protein interactions for RNA: ENST00000509818.5

SEC24D-209, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC24D, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-209ENST00000509818 RIT2Q99578 217 aa10.07□□□□□ -0.8
SEC24D-209ENST00000509818 BAG1Q99933 345 aaPredicted RBP10.07□□□□□ -0.8
SEC24D-209ENST00000509818 HSD17B14Q9BPX1 270 aa10.07□□□□□ -0.8
SEC24D-209ENST00000509818 TEKT3Q9BXF9 490 aa10.07□□□□□ -0.8
SEC24D-209ENST00000509818 MAF1Q9H063 256 aa10.07□□□□□ -0.8
SEC24D-209ENST00000509818 SEMA6BQ9H3T3 888 aa10.07□□□□□ -0.8
SEC24D-209ENST00000509818 CREBZFQ9NS37 354 aa10.07□□□□□ -0.8
SEC24D-209ENST00000509818 LGALS16A8MUM7 142 aa10.06□□□□□ -0.8
SEC24D-209ENST00000509818 KIF2AO00139 706 aaPredicted RBP10.06□□□□□ -0.8
SEC24D-209ENST00000509818 EML1O00423 815 aa10.06□□□□□ -0.8
SEC24D-209ENST00000509818 ARHGAP6O43182 974 aa10.06□□□□□ -0.8
SEC24D-209ENST00000509818 ARP10275 920 aa10.06□□□□□ -0.8
SEC24D-209ENST00000509818 DNM2P50570 870 aa10.06□□□□□ -0.8
SEC24D-209ENST00000509818 HMGCS2P54868 508 aa10.06□□□□□ -0.8
SEC24D-209ENST00000509818 ADKP55263 362 aaKnown RBP10.06□□□□□ -0.8
SEC24D-209ENST00000509818 PSMC6P62333 389 aa10.06□□□□□ -0.8
SEC24D-209ENST00000509818 UBXN1Q04323 297 aa10.06□□□□□ -0.8
SEC24D-209ENST00000509818 EPHA7Q15375 998 aa10.06□□□□□ -0.8
SEC24D-209ENST00000509818 SYCP1Q15431 976 aa10.06□□□□□ -0.8
SEC24D-209ENST00000509818 PTPN14Q15678 1187 aa10.06□□□□□ -0.8
SEC24D-209ENST00000509818 HERC4Q5GLZ8 1057 aaPredicted RBP10.06□□□□□ -0.8
SEC24D-209ENST00000509818 MUM1L1Q5H9M0 696 aa10.06□□□□□ -0.8
SEC24D-209ENST00000509818 CATSPERGQ6ZRH7 1159 aa10.06□□□□□ -0.8
SEC24D-209ENST00000509818 USP50Q70EL3 339 aaPredicted RBP10.06□□□□□ -0.8
SEC24D-209ENST00000509818 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.06□□□□□ -0.8
SEC24D-209ENST00000509818 NAA15Q9BXJ9 866 aaKnown RBP10.06□□□□□ -0.8
SEC24D-209ENST00000509818 HOMER2Q9NSB8 354 aa10.06□□□□□ -0.8
SEC24D-209ENST00000509818 COL20A1Q9P218 1284 aa10.06□□□□□ -0.8
SEC24D-209ENST00000509818 ADAMTS5Q9UNA0 930 aa10.06□□□□□ -0.8
SEC24D-209ENST00000509818 AFG3L2Q9Y4W6 797 aa10.06□□□□□ -0.8
SEC24D-209ENST00000509818 UBIAD1Q9Y5Z9 338 aa10.06□□□□□ -0.8
SEC24D-209ENST00000509818 POLR2AP24928 1970 aaKnown RBP10.06□□□□□ -0.8
SEC24D-209ENST00000509818 A0A1W2PQC6 194 aa10.06□□□□□ -0.8
SEC24D-209ENST00000509818 FRMD3A2A2Y4 597 aa10.06□□□□□ -0.8
SEC24D-209ENST00000509818 IPO5O00410 1097 aaKnown RBP10.06□□□□□ -0.8
SEC24D-209ENST00000509818 TUBB4AP04350 444 aa10.06□□□□□ -0.8
SEC24D-209ENST00000509818 TNNT1P13805 278 aa10.06□□□□□ -0.8
SEC24D-209ENST00000509818 MTIF2P46199 727 aaKnown RBP10.06□□□□□ -0.8
SEC24D-209ENST00000509818 RBL2Q08999 1139 aa10.06□□□□□ -0.8
SEC24D-209ENST00000509818 PABPC4Q13310 644 aaKnown RBP eCLIP10.06□□□□□ -0.8
SEC24D-209ENST00000509818 GIT2Q14161 759 aa10.06□□□□□ -0.8
SEC24D-209ENST00000509818 FRMPD4Q14CM0 1322 aa10.06□□□□□ -0.8
SEC24D-209ENST00000509818 TKFCQ3LXA3 575 aa10.06□□□□□ -0.8
SEC24D-209ENST00000509818 ARSHQ5FYA8 562 aa10.06□□□□□ -0.8
SEC24D-209ENST00000509818 SH3D19Q5HYK7 790 aa10.06□□□□□ -0.8
SEC24D-209ENST00000509818 E4F1Q66K89 784 aaPredicted RBP10.06□□□□□ -0.8
SEC24D-209ENST00000509818 XRRA1Q6P2D8 792 aa10.06□□□□□ -0.8
SEC24D-209ENST00000509818 RNF207Q6ZRF8 634 aa10.06□□□□□ -0.8
SEC24D-209ENST00000509818 CNGA4Q8IV77 575 aa10.06□□□□□ -0.8
SEC24D-209ENST00000509818 SULF1Q8IWU6 871 aa10.06□□□□□ -0.8
SEC24D-209ENST00000509818 MB21D1Q8N884 522 aa10.06□□□□□ -0.8
SEC24D-209ENST00000509818 NEK9Q8TD19 979 aa10.06□□□□□ -0.8
SEC24D-209ENST00000509818 TUBGCP2Q9BSJ2 902 aa10.06□□□□□ -0.8
SEC24D-209ENST00000509818 HOXC10Q9NYD6 342 aa10.06□□□□□ -0.8
SEC24D-209ENST00000509818 PHIPQ8WWQ0 1821 aa10.05□□□□□ -0.8
SEC24D-209ENST00000509818 MYPNQ86TC9 1320 aa10.05□□□□□ -0.8
SEC24D-209ENST00000509818 NPHP3-ACAD11A0A0J9YXS1 232 aa10.05□□□□□ -0.8
SEC24D-209ENST00000509818 ATP2A1O14983 1001 aa10.05□□□□□ -0.8
SEC24D-209ENST00000509818 ZSCAN12O43309 604 aa10.05□□□□□ -0.8
SEC24D-209ENST00000509818 PPP1R12BO60237 982 aaPredicted RBP10.05□□□□□ -0.8
SEC24D-209ENST00000509818 SLITRK3O94933 977 aa10.05□□□□□ -0.8
SEC24D-209ENST00000509818 ITGB5P18084 799 aa10.05□□□□□ -0.8
SEC24D-209ENST00000509818 RPS6P62753 249 aaKnown RBP10.05□□□□□ -0.8
SEC24D-209ENST00000509818 CYP4A11Q02928 519 aa10.05□□□□□ -0.8
SEC24D-209ENST00000509818 GOLGA8FQ08AF8 430 aa10.05□□□□□ -0.8
SEC24D-209ENST00000509818 GOLGA8DPQ0D2H9 430 aa10.05□□□□□ -0.8
SEC24D-209ENST00000509818 CTTNQ14247 550 aaKnown RBP10.05□□□□□ -0.8
SEC24D-209ENST00000509818 TMEM139Q8IV31 216 aa10.05□□□□□ -0.8
SEC24D-209ENST00000509818 TPH2Q8IWU9 490 aa10.05□□□□□ -0.8
SEC24D-209ENST00000509818 REPS2Q8NFH8 660 aa10.05□□□□□ -0.8
SEC24D-209ENST00000509818 ZNF507Q8TCN5 953 aa10.05□□□□□ -0.8
SEC24D-209ENST00000509818 DYDC2Q96IM9 177 aa10.05□□□□□ -0.8
SEC24D-209ENST00000509818 CNOT6LQ96LI5 555 aaKnown RBP10.05□□□□□ -0.8
SEC24D-209ENST00000509818 C16orf45Q96MC5 204 aaPredicted RBP10.05□□□□□ -0.8
SEC24D-209ENST00000509818 NACC1Q96RE7 527 aa10.05□□□□□ -0.8
SEC24D-209ENST00000509818 TAAR1Q96RJ0 339 aa10.05□□□□□ -0.8
SEC24D-209ENST00000509818 UNC45AQ9H3U1 944 aa10.05□□□□□ -0.8
SEC24D-209ENST00000509818 JADE2Q9NQC1 790 aa10.05□□□□□ -0.8
SEC24D-209ENST00000509818 RNF146Q9NTX7 359 aa10.05□□□□□ -0.8
SEC24D-209ENST00000509818 TRMT1Q9NXH9 659 aaKnown RBP10.05□□□□□ -0.8
SEC24D-209ENST00000509818 RGL1Q9NZL6 768 aa10.05□□□□□ -0.8
SEC24D-209ENST00000509818 FZD1Q9UP38 647 aa10.05□□□□□ -0.8
SEC24D-209ENST00000509818 PCDHA2Q9Y5H9 948 aa10.05□□□□□ -0.8
SEC24D-209ENST00000509818 PARP14Q460N5 1801 aa10.05□□□□□ -0.8
SEC24D-209ENST00000509818 SSC5DA1L4H1 1573 aa10.05□□□□□ -0.8
SEC24D-209ENST00000509818 TMEM88BA6NKF7 163 aa10.04□□□□□ -0.8
SEC24D-209ENST00000509818 USP27XA6NNY8 438 aa10.04□□□□□ -0.8
SEC24D-209ENST00000509818 PES1O00541 588 aaKnown RBP10.04□□□□□ -0.8
SEC24D-209ENST00000509818 CHMP2AO43633 222 aa10.04□□□□□ -0.8
SEC24D-209ENST00000509818 MFAP3LO75121 409 aa10.04□□□□□ -0.8
SEC24D-209ENST00000509818 FAM193AP78312 1265 aa10.04□□□□□ -0.8
SEC24D-209ENST00000509818 PRKG1Q13976 671 aa10.04□□□□□ -0.8
SEC24D-209ENST00000509818 PGM5Q15124 567 aa10.04□□□□□ -0.8
SEC24D-209ENST00000509818 LRRC41Q15345 812 aa10.04□□□□□ -0.8
SEC24D-209ENST00000509818 FKBP15Q5T1M5 1219 aa10.04□□□□□ -0.8
SEC24D-209ENST00000509818 ARHGEF16Q5VV41 709 aa10.04□□□□□ -0.8
SEC24D-209ENST00000509818 CST9Q5W186 159 aa10.04□□□□□ -0.8
SEC24D-209ENST00000509818 B3GNT9Q6UX72 402 aa10.04□□□□□ -0.8
SEC24D-209ENST00000509818 NSMFQ6X4W1 530 aa10.04□□□□□ -0.8
SEC24D-209ENST00000509818 NYAP1Q6ZVC0 841 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms