RNA–Protein interactions for RNA: ENST00000509388.5

RNF4-213, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-213ENST00000509388 AZI2Q9H6S1 392 aa16.72■□□□□ 0.27
RNF4-213ENST00000509388 OGDHLQ9ULD0 1010 aa16.72■□□□□ 0.27
RNF4-213ENST00000509388 ELP1O95163 1332 aa16.71■□□□□ 0.27
RNF4-213ENST00000509388 MYH7BA7E2Y1 1941 aa16.71■□□□□ 0.27
RNF4-213ENST00000509388 CCDC85CA6NKD9 419 aa16.71■□□□□ 0.27
RNF4-213ENST00000509388 BACH1O14867 736 aa16.71■□□□□ 0.27
RNF4-213ENST00000509388 PSAPP07602 524 aa16.71■□□□□ 0.27
RNF4-213ENST00000509388 PRPHP41219 470 aa16.71■□□□□ 0.27
RNF4-213ENST00000509388 LRRC41Q15345 812 aa16.71■□□□□ 0.27
RNF4-213ENST00000509388 UTP14CQ5TAP6 766 aaKnown RBP16.71■□□□□ 0.27
RNF4-213ENST00000509388 ARL6IP4Q66PJ3 421 aaKnown RBP16.71■□□□□ 0.27
RNF4-213ENST00000509388 VTI1AQ96AJ9 217 aa16.71■□□□□ 0.27
RNF4-213ENST00000509388 UNC45AQ9H3U1 944 aa16.71■□□□□ 0.27
RNF4-213ENST00000509388 DISC1Q9NRI5 854 aa16.71■□□□□ 0.27
RNF4-213ENST00000509388 PCDHA10Q9Y5I2 948 aa16.71■□□□□ 0.27
RNF4-213ENST00000509388 LRRC37A2A6NM11 1700 aa16.7■□□□□ 0.26
RNF4-213ENST00000509388 MYADML2A6NDP7 307 aa16.7■□□□□ 0.26
RNF4-213ENST00000509388 DNM1LO00429 736 aa16.7■□□□□ 0.26
RNF4-213ENST00000509388 YEATS4O95619 227 aa16.7■□□□□ 0.26
RNF4-213ENST00000509388 CCNE2O96020 404 aa16.7■□□□□ 0.26
RNF4-213ENST00000509388 CST5P28325 142 aaPredicted RBP16.7■□□□□ 0.26
RNF4-213ENST00000509388 TCF7P36402 384 aaPredicted RBP16.7■□□□□ 0.26
RNF4-213ENST00000509388 NASPP49321 788 aaPredicted RBP16.7■□□□□ 0.26
RNF4-213ENST00000509388 NKX3-2P78367 333 aa16.7■□□□□ 0.26
RNF4-213ENST00000509388 PPP2R5CQ13362 524 aa16.7■□□□□ 0.26
RNF4-213ENST00000509388 SLC39A14Q15043 492 aa16.7■□□□□ 0.26
RNF4-213ENST00000509388 KCNA10Q16322 511 aa16.7■□□□□ 0.26
RNF4-213ENST00000509388 KLHDC9Q8NEP7 349 aa16.7■□□□□ 0.26
RNF4-213ENST00000509388 RDM1Q8NG50 284 aa16.7■□□□□ 0.26
RNF4-213ENST00000509388 ERMNQ8TAM6 284 aa16.7■□□□□ 0.26
RNF4-213ENST00000509388 GLG1Q92896 1179 aa16.7■□□□□ 0.26
RNF4-213ENST00000509388 FERMT2Q96AC1 680 aa16.7■□□□□ 0.26
RNF4-213ENST00000509388 TSEN34Q9BSV6 310 aaKnown RBP16.7■□□□□ 0.26
RNF4-213ENST00000509388 CRISPLD2Q9H0B8 497 aa16.7■□□□□ 0.26
RNF4-213ENST00000509388 GSTTP1A0A1W2PQM5 241 aa16.69■□□□□ 0.26
RNF4-213ENST00000509388 VWA3AA6NCI4 1184 aa16.69■□□□□ 0.26
RNF4-213ENST00000509388 MOXD2PA6NHM9 499 aa16.69■□□□□ 0.26
RNF4-213ENST00000509388 SPTLC2O15270 562 aa16.69■□□□□ 0.26
RNF4-213ENST00000509388 ASGR1P07306 291 aa16.69■□□□□ 0.26
RNF4-213ENST00000509388 SUPT20HL2P0C7V6 817 aa16.69■□□□□ 0.26
RNF4-213ENST00000509388 MARCKSP29966 332 aaPredicted RBP16.69■□□□□ 0.26
RNF4-213ENST00000509388 FXR2P51116 673 aaKnown RBP eCLIP16.69■□□□□ 0.26
RNF4-213ENST00000509388 CHMP4BP1P59074 171 aa16.69■□□□□ 0.26
RNF4-213ENST00000509388 IRX5P78411 483 aaPredicted RBP16.69■□□□□ 0.26
RNF4-213ENST00000509388 PTPAQ15257 358 aa16.69■□□□□ 0.26
RNF4-213ENST00000509388 FAM160B1Q5W0V3 765 aa16.69■□□□□ 0.26
RNF4-213ENST00000509388 ANKLE1Q8NAG6 615 aa16.69■□□□□ 0.26
RNF4-213ENST00000509388 LINC00301Q8NCQ3 95 aa16.69■□□□□ 0.26
RNF4-213ENST00000509388 KCNG4Q8TDN1 519 aa16.69■□□□□ 0.26
RNF4-213ENST00000509388 GLT1D1Q96MS3 346 aa16.69■□□□□ 0.26
RNF4-213ENST00000509388 MTG1Q9BT17 334 aaPredicted RBP16.69■□□□□ 0.26
RNF4-213ENST00000509388 SCAND2PQ9GZW5 306 aaPredicted RBP16.69■□□□□ 0.26
RNF4-213ENST00000509388 LRWD1Q9UFC0 647 aa16.69■□□□□ 0.26
RNF4-213ENST00000509388 VAV3Q9UKW4 847 aa16.69■□□□□ 0.26
RNF4-213ENST00000509388 ZNF215Q9UL58 517 aaPredicted RBP16.69■□□□□ 0.26
RNF4-213ENST00000509388 STK24Q9Y6E0 443 aa16.69■□□□□ 0.26
RNF4-213ENST00000509388 POTEFA5A3E0 1075 aa16.68■□□□□ 0.26
RNF4-213ENST00000509388 CTAGE5O15320 804 aa16.68■□□□□ 0.26
RNF4-213ENST00000509388 CABYRO75952 493 aa16.68■□□□□ 0.26
RNF4-213ENST00000509388 STAT5BP51692 787 aa16.68■□□□□ 0.26
RNF4-213ENST00000509388 ACLYP53396 1101 aa16.68■□□□□ 0.26
RNF4-213ENST00000509388 PDIA5Q14554 519 aa16.68■□□□□ 0.26
RNF4-213ENST00000509388 EPHA7Q15375 998 aa16.68■□□□□ 0.26
RNF4-213ENST00000509388 SWSAP1Q6NVH7 229 aa16.68■□□□□ 0.26
RNF4-213ENST00000509388 ABHD15Q6UXT9 468 aa16.68■□□□□ 0.26
RNF4-213ENST00000509388 SPATA32Q96LK8 384 aa16.68■□□□□ 0.26
RNF4-213ENST00000509388 KATNAL1Q9BW62 490 aa16.68■□□□□ 0.26
RNF4-213ENST00000509388 SMARCAD1Q9H4L7 1026 aa16.68■□□□□ 0.26
RNF4-213ENST00000509388 ZNF302Q9NR11 478 aa16.68■□□□□ 0.26
RNF4-213ENST00000509388 TELO2Q9Y4R8 837 aa16.68■□□□□ 0.26
RNF4-213ENST00000509388 KIAA1217Q5T5P2 1943 aa16.67■□□□□ 0.26
RNF4-213ENST00000509388 POTEMA6NI47 508 aa16.67■□□□□ 0.26
RNF4-213ENST00000509388 DKC1O60832 514 aaKnown RBP eCLIP16.67■□□□□ 0.26
RNF4-213ENST00000509388 PPP6R2O75170 966 aa16.67■□□□□ 0.26
RNF4-213ENST00000509388 ATG7O95352 703 aa16.67■□□□□ 0.26
RNF4-213ENST00000509388 LGALS2P05162 132 aa16.67■□□□□ 0.26
RNF4-213ENST00000509388 ME1P48163 572 aa16.67■□□□□ 0.26
RNF4-213ENST00000509388 KRT79Q5XKE5 535 aa16.67■□□□□ 0.26
RNF4-213ENST00000509388 HAUS3Q68CZ6 603 aa16.67■□□□□ 0.26
RNF4-213ENST00000509388 B3GNT9Q6UX72 402 aa16.67■□□□□ 0.26
RNF4-213ENST00000509388 CXCL17Q6UXB2 119 aa16.67■□□□□ 0.26
RNF4-213ENST00000509388 CKAP2LQ8IYA6 745 aa16.67■□□□□ 0.26
RNF4-213ENST00000509388 KRI1Q8N9T8 703 aaKnown RBP16.67■□□□□ 0.26
RNF4-213ENST00000509388 TNPO1Q92973 898 aaKnown RBP16.67■□□□□ 0.26
RNF4-213ENST00000509388 ATP6V0A1Q93050 837 aa16.67■□□□□ 0.26
RNF4-213ENST00000509388 ERAP1Q9NZ08 941 aa16.67■□□□□ 0.26
RNF4-213ENST00000509388 GABBR1Q9UBS5 961 aa16.67■□□□□ 0.26
RNF4-213ENST00000509388 SRPRBQ9Y5M8 271 aaKnown RBP16.67■□□□□ 0.26
RNF4-213ENST00000509388 H3BRB1 525 aa16.66■□□□□ 0.26
RNF4-213ENST00000509388 EML1O00423 815 aa16.66■□□□□ 0.26
RNF4-213ENST00000509388 P4HBP07237 508 aaKnown RBP16.66■□□□□ 0.26
RNF4-213ENST00000509388 ZNF286BP0CG31 522 aa16.66■□□□□ 0.26
RNF4-213ENST00000509388 EN2P19622 333 aaPredicted RBP16.66■□□□□ 0.26
RNF4-213ENST00000509388 LONP1P36776 959 aaKnown RBP16.66■□□□□ 0.26
RNF4-213ENST00000509388 PURAQ00577 322 aaKnown RBP16.66■□□□□ 0.26
RNF4-213ENST00000509388 IL17AQ16552 155 aa16.66■□□□□ 0.26
RNF4-213ENST00000509388 CCSAPQ6IQ19 270 aaPredicted RBP16.66■□□□□ 0.26
RNF4-213ENST00000509388 PDXDC2PQ6P474 469 aa16.66■□□□□ 0.26
RNF4-213ENST00000509388 PLPPR4Q7Z2D5 763 aa16.66■□□□□ 0.26
RNF4-213ENST00000509388 AK8Q96MA6 479 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms