RNA–Protein interactions for RNA: ENST00000508809.1

COL4A3BP-206, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2

Gene COL4A3BP, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-206ENST00000508809 SLFN13Q68D06 897 aa10.23□□□□□ -0.77
COL4A3BP-206ENST00000508809 CCDC129Q6ZRS4 1044 aa10.23□□□□□ -0.77
COL4A3BP-206ENST00000508809 ZNF295-AS1Q8N0V1 137 aa10.23□□□□□ -0.77
COL4A3BP-206ENST00000508809 STK11IPQ8N1F8 1099 aa10.23□□□□□ -0.77
COL4A3BP-206ENST00000508809 NEDD1Q8NHV4 660 aa10.23□□□□□ -0.77
COL4A3BP-206ENST00000508809 SEZ6LQ9BYH1 1024 aa10.23□□□□□ -0.77
COL4A3BP-206ENST00000508809 IL23AQ9NPF7 189 aa10.23□□□□□ -0.77
COL4A3BP-206ENST00000508809 CTDP1Q9Y5B0 961 aaPredicted RBP10.23□□□□□ -0.77
COL4A3BP-206ENST00000508809 ZNF536O15090 1300 aa10.23□□□□□ -0.77
COL4A3BP-206ENST00000508809 GRIN2DO15399 1336 aa10.23□□□□□ -0.77
COL4A3BP-206ENST00000508809 PLIN4Q96Q06 1357 aa10.23□□□□□ -0.77
COL4A3BP-206ENST00000508809 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.22□□□□□ -0.77
COL4A3BP-206ENST00000508809 A0A1W2PNR3 127 aa10.22□□□□□ -0.77
COL4A3BP-206ENST00000508809 ASB14A6NK59 587 aa10.22□□□□□ -0.77
COL4A3BP-206ENST00000508809 TLR3O15455 904 aaKnown RBP10.22□□□□□ -0.77
COL4A3BP-206ENST00000508809 GPAA1O43292 621 aa10.22□□□□□ -0.77
COL4A3BP-206ENST00000508809 PRDM1O75626 825 aa10.22□□□□□ -0.77
COL4A3BP-206ENST00000508809 ZFYP08048 801 aaPredicted RBP10.22□□□□□ -0.77
COL4A3BP-206ENST00000508809 CYP2C18P33260 490 aa10.22□□□□□ -0.77
COL4A3BP-206ENST00000508809 MAP2K3P46734 347 aa10.22□□□□□ -0.77
COL4A3BP-206ENST00000508809 TNFAIP2Q03169 654 aa10.22□□□□□ -0.77
COL4A3BP-206ENST00000508809 ADGRE1Q14246 886 aa10.22□□□□□ -0.77
COL4A3BP-206ENST00000508809 TKFCQ3LXA3 575 aa10.22□□□□□ -0.77
COL4A3BP-206ENST00000508809 IFNL3Q8IZI9 196 aa10.22□□□□□ -0.77
COL4A3BP-206ENST00000508809 CHURC1Q8WUH1 139 aa10.22□□□□□ -0.77
COL4A3BP-206ENST00000508809 STAG1Q8WVM7 1258 aa10.22□□□□□ -0.77
COL4A3BP-206ENST00000508809 ACAD9Q9H845 621 aa10.22□□□□□ -0.77
COL4A3BP-206ENST00000508809 CXXC1Q9P0U4 656 aaPredicted RBP10.22□□□□□ -0.77
COL4A3BP-206ENST00000508809 Q9Y3F1 56 aa10.22□□□□□ -0.77
COL4A3BP-206ENST00000508809 PCDHGC4Q9Y5F7 938 aa10.22□□□□□ -0.77
COL4A3BP-206ENST00000508809 PRRC2BQ5JSZ5 2229 aaKnown RBP10.21□□□□□ -0.77
COL4A3BP-206ENST00000508809 TMEM232C9JQI7 657 aa10.21□□□□□ -0.77
COL4A3BP-206ENST00000508809 FGBP02675 491 aa10.21□□□□□ -0.77
COL4A3BP-206ENST00000508809 STAT2P52630 851 aa10.21□□□□□ -0.77
COL4A3BP-206ENST00000508809 BEX3Q00994 111 aa10.21□□□□□ -0.77
COL4A3BP-206ENST00000508809 RAB30Q15771 203 aa10.21□□□□□ -0.77
COL4A3BP-206ENST00000508809 IQSEC1Q6DN90 963 aa10.21□□□□□ -0.77
COL4A3BP-206ENST00000508809 TAPT1Q6NXT6 567 aa10.21□□□□□ -0.77
COL4A3BP-206ENST00000508809 CXCL17Q6UXB2 119 aa10.21□□□□□ -0.77
COL4A3BP-206ENST00000508809 FAM160B2Q86V87 743 aa10.21□□□□□ -0.77
COL4A3BP-206ENST00000508809 LRRC47Q8N1G4 583 aaKnown RBP10.21□□□□□ -0.77
COL4A3BP-206ENST00000508809 FAM200AQ8TCP9 573 aa10.21□□□□□ -0.77
COL4A3BP-206ENST00000508809 VWCEQ96DN2 955 aa10.21□□□□□ -0.77
COL4A3BP-206ENST00000508809 ASB2Q96Q27 587 aa10.21□□□□□ -0.77
COL4A3BP-206ENST00000508809 PRDM12Q9H4Q4 367 aa10.21□□□□□ -0.77
COL4A3BP-206ENST00000508809 DCTPP1Q9H773 170 aa10.21□□□□□ -0.77
COL4A3BP-206ENST00000508809 A1CFQ9NQ94 594 aaKnown RBP10.21□□□□□ -0.77
COL4A3BP-206ENST00000508809 MSRAQ9UJ68 235 aa10.21□□□□□ -0.77
COL4A3BP-206ENST00000508809 TCF20Q9UGU0 1960 aaKnown RBP10.21□□□□□ -0.78
COL4A3BP-206ENST00000508809 M0R2C6 588 aa10.2□□□□□ -0.78
COL4A3BP-206ENST00000508809 ATXN7O15265 892 aaPredicted RBP10.2□□□□□ -0.78
COL4A3BP-206ENST00000508809 TDO2P48775 406 aa10.2□□□□□ -0.78
COL4A3BP-206ENST00000508809 MRPS5P82675 430 aaKnown RBP10.2□□□□□ -0.78
COL4A3BP-206ENST00000508809 TFAP4Q01664 338 aa10.2□□□□□ -0.78
COL4A3BP-206ENST00000508809 PDE4BQ07343 736 aa10.2□□□□□ -0.78
COL4A3BP-206ENST00000508809 ITGA7Q13683 1181 aa10.2□□□□□ -0.78
COL4A3BP-206ENST00000508809 FSCN1Q16658 493 aaKnown RBP10.2□□□□□ -0.78
COL4A3BP-206ENST00000508809 TLK2Q86UE8 772 aa10.2□□□□□ -0.78
COL4A3BP-206ENST00000508809 MORC4Q8TE76 937 aa10.2□□□□□ -0.78
COL4A3BP-206ENST00000508809 ZDHHC1Q8WTX9 485 aa10.2□□□□□ -0.78
COL4A3BP-206ENST00000508809 SCG3Q8WXD2 468 aaKnown RBP10.2□□□□□ -0.78
COL4A3BP-206ENST00000508809 NOC4LQ9BVI4 516 aaKnown RBP10.2□□□□□ -0.78
COL4A3BP-206ENST00000508809 MTIF3Q9H2K0 278 aaKnown RBP10.2□□□□□ -0.78
COL4A3BP-206ENST00000508809 HIPK3Q9H422 1215 aa10.2□□□□□ -0.78
COL4A3BP-206ENST00000508809 ENAMQ9NRM1 1142 aa10.2□□□□□ -0.78
COL4A3BP-206ENST00000508809 HOMER2Q9NSB8 354 aa10.2□□□□□ -0.78
COL4A3BP-206ENST00000508809 RNF146Q9NTX7 359 aa10.2□□□□□ -0.78
COL4A3BP-206ENST00000508809 LCTP09848 1927 aa10.19□□□□□ -0.78
COL4A3BP-206ENST00000508809 UMODL1Q5DID0 1318 aa10.19□□□□□ -0.78
COL4A3BP-206ENST00000508809 DYNC1LI2O43237 492 aaPredicted RBP10.19□□□□□ -0.78
COL4A3BP-206ENST00000508809 ZEB2O60315 1214 aa10.19□□□□□ -0.78
COL4A3BP-206ENST00000508809 B4GALT4O60513 344 aa10.19□□□□□ -0.78
COL4A3BP-206ENST00000508809 DKK1O94907 266 aa10.19□□□□□ -0.78
COL4A3BP-206ENST00000508809 APPP05067 770 aa10.19□□□□□ -0.78
COL4A3BP-206ENST00000508809 TSPY3P0CV98 308 aa10.19□□□□□ -0.78
COL4A3BP-206ENST00000508809 TSPY8P0CW00 308 aa10.19□□□□□ -0.78
COL4A3BP-206ENST00000508809 MCCP23508 829 aa10.19□□□□□ -0.78
COL4A3BP-206ENST00000508809 TXLNAP40222 546 aa10.19□□□□□ -0.78
COL4A3BP-206ENST00000508809 SLC1A4P43007 532 aa10.19□□□□□ -0.78
COL4A3BP-206ENST00000508809 NOVP48745 357 aa10.19□□□□□ -0.78
COL4A3BP-206ENST00000508809 TMEM63BQ5T3F8 832 aa10.19□□□□□ -0.78
COL4A3BP-206ENST00000508809 RCSD1Q6JBY9 416 aa10.19□□□□□ -0.78
COL4A3BP-206ENST00000508809 NOL8Q76FK4 1167 aaKnown RBP10.19□□□□□ -0.78
COL4A3BP-206ENST00000508809 RPUSD2Q8IZ73 545 aaKnown RBP10.19□□□□□ -0.78
COL4A3BP-206ENST00000508809 PPM1EQ8WY54 764 aa10.19□□□□□ -0.78
COL4A3BP-206ENST00000508809 NACAP1Q9BZK3 213 aa10.19□□□□□ -0.78
COL4A3BP-206ENST00000508809 ZCCHC2Q9C0B9 1178 aaKnown RBP10.19□□□□□ -0.78
COL4A3BP-206ENST00000508809 AP5M1Q9H0R1 490 aa10.19□□□□□ -0.78
COL4A3BP-206ENST00000508809 TRPV6Q9H1D0 765 aa10.19□□□□□ -0.78
COL4A3BP-206ENST00000508809 NKX2-4Q9H2Z4 354 aa10.19□□□□□ -0.78
COL4A3BP-206ENST00000508809 PDGFCQ9NRA1 345 aa10.19□□□□□ -0.78
COL4A3BP-206ENST00000508809 IL17RBQ9NRM6 502 aa10.19□□□□□ -0.78
COL4A3BP-206ENST00000508809 CYP39A1Q9NYL5 469 aa10.19□□□□□ -0.78
COL4A3BP-206ENST00000508809 THEGQ9P2T0 379 aa10.19□□□□□ -0.78
COL4A3BP-206ENST00000508809 YBX2Q9Y2T7 364 aaKnown RBP10.19□□□□□ -0.78
COL4A3BP-206ENST00000508809 TET1Q8NFU7 2136 aa10.18□□□□□ -0.78
COL4A3BP-206ENST00000508809 SCN10AQ9Y5Y9 1956 aa10.18□□□□□ -0.78
COL4A3BP-206ENST00000508809 LOC102724159A0A0B4J2E5 919 aa10.18□□□□□ -0.78
COL4A3BP-206ENST00000508809 EML1O00423 815 aa10.18□□□□□ -0.78
COL4A3BP-206ENST00000508809 SLC3A2P08195 630 aaKnown RBP10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms