RNA–Protein interactions for RNA: ENST00000508715.5

PTPN20-220, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 586 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-220ENST00000508715 PAWRQ96IZ0 340 aaKnown RBP11.7□□□□□ -0.54
PTPN20-220ENST00000508715 USP28Q96RU2 1077 aa11.7□□□□□ -0.54
PTPN20-220ENST00000508715 RIT2Q99578 217 aa11.7□□□□□ -0.54
PTPN20-220ENST00000508715 TSEN34Q9BSV6 310 aaKnown RBP11.7□□□□□ -0.54
PTPN20-220ENST00000508715 MLXIPQ9HAP2 919 aa11.7□□□□□ -0.54
PTPN20-220ENST00000508715 JPH1Q9HDC5 661 aaPredicted RBP11.7□□□□□ -0.54
PTPN20-220ENST00000508715 CLIC4Q9Y696 253 aa11.7□□□□□ -0.54
PTPN20-220ENST00000508715 ARID2Q68CP9 1835 aa11.7□□□□□ -0.54
PTPN20-220ENST00000508715 LOXHD1Q8IVV2 1947 aa11.69□□□□□ -0.54
PTPN20-220ENST00000508715 A0A1W2PQ45 241 aaPredicted RBP11.69□□□□□ -0.54
PTPN20-220ENST00000508715 A0A1W2PQY0 241 aa11.69□□□□□ -0.54
PTPN20-220ENST00000508715 HAS3O00219 553 aa11.69□□□□□ -0.54
PTPN20-220ENST00000508715 PPFIA4O75335 1185 aa11.69□□□□□ -0.54
PTPN20-220ENST00000508715 LGR5O75473 907 aa11.69□□□□□ -0.54
PTPN20-220ENST00000508715 MYCNP04198 464 aaPredicted RBP11.69□□□□□ -0.54
PTPN20-220ENST00000508715 LGALS2P05162 132 aa11.69□□□□□ -0.54
PTPN20-220ENST00000508715 ZNF286BP0CG31 522 aa11.69□□□□□ -0.54
PTPN20-220ENST00000508715 ATP4AP20648 1035 aa11.69□□□□□ -0.54
PTPN20-220ENST00000508715 TCF7P36402 384 aaPredicted RBP11.69□□□□□ -0.54
PTPN20-220ENST00000508715 PSMC6P62333 389 aa11.69□□□□□ -0.54
PTPN20-220ENST00000508715 GRIN1Q05586 938 aa11.69□□□□□ -0.54
PTPN20-220ENST00000508715 PTGDRQ13258 359 aa11.69□□□□□ -0.54
PTPN20-220ENST00000508715 HIC1Q14526 733 aa11.69□□□□□ -0.54
PTPN20-220ENST00000508715 RNF180Q86T96 592 aa11.69□□□□□ -0.54
PTPN20-220ENST00000508715 CCDC60Q8IWA6 550 aaPredicted RBP11.69□□□□□ -0.54
PTPN20-220ENST00000508715 GIMAP8Q8ND71 665 aaPredicted RBP11.69□□□□□ -0.54
PTPN20-220ENST00000508715 FAM20AQ96MK3 541 aa11.69□□□□□ -0.54
PTPN20-220ENST00000508715 NAP1L4Q99733 375 aaKnown RBP11.69□□□□□ -0.54
PTPN20-220ENST00000508715 ZSCAN16Q9H4T2 348 aaPredicted RBP11.69□□□□□ -0.54
PTPN20-220ENST00000508715 TBC1D22BQ9NU19 505 aa11.69□□□□□ -0.54
PTPN20-220ENST00000508715 NOL7Q9UMY1 257 aaKnown RBP11.69□□□□□ -0.54
PTPN20-220ENST00000508715 ELP1O95163 1332 aa11.68□□□□□ -0.54
PTPN20-220ENST00000508715 RBAK-RBAKDNI3L0D1 243 aa11.68□□□□□ -0.54
PTPN20-220ENST00000508715 GAS7O60861 476 aa11.68□□□□□ -0.54
PTPN20-220ENST00000508715 STBD1O95210 358 aa11.68□□□□□ -0.54
PTPN20-220ENST00000508715 MYL3P08590 195 aa11.68□□□□□ -0.54
PTPN20-220ENST00000508715 CPT1AP50416 773 aa11.68□□□□□ -0.54
PTPN20-220ENST00000508715 ATP2C1P98194 919 aaPredicted RBP11.68□□□□□ -0.54
PTPN20-220ENST00000508715 PPP2R5CQ13362 524 aa11.68□□□□□ -0.54
PTPN20-220ENST00000508715 ORC2Q13416 577 aaPredicted RBP11.68□□□□□ -0.54
PTPN20-220ENST00000508715 SF3A1Q15459 793 aaKnown RBP11.68□□□□□ -0.54
PTPN20-220ENST00000508715 CALCRLQ16602 461 aa11.68□□□□□ -0.54
PTPN20-220ENST00000508715 UGCGQ16739 394 aa11.68□□□□□ -0.54
PTPN20-220ENST00000508715 ZNF746Q6NUN9 644 aaPredicted RBP11.68□□□□□ -0.54
PTPN20-220ENST00000508715 SLC43A3Q8NBI5 491 aa11.68□□□□□ -0.54
PTPN20-220ENST00000508715 SEPT1Q8WYJ6 367 aa11.68□□□□□ -0.54
PTPN20-220ENST00000508715 SDF4Q9BRK5 362 aa11.68□□□□□ -0.54
PTPN20-220ENST00000508715 TTC12Q9H892 705 aaPredicted RBP11.68□□□□□ -0.54
PTPN20-220ENST00000508715 SPC25Q9HBM1 224 aa11.68□□□□□ -0.54
PTPN20-220ENST00000508715 TFIP11Q9UBB9 837 aaKnown RBP11.68□□□□□ -0.54
PTPN20-220ENST00000508715 EMSYQ7Z589 1322 aa11.67□□□□□ -0.54
PTPN20-220ENST00000508715 MOXD2PA6NHM9 499 aa11.67□□□□□ -0.54
PTPN20-220ENST00000508715 POTEMA6NI47 508 aa11.67□□□□□ -0.54
PTPN20-220ENST00000508715 KBTBD13C9JR72 458 aa11.67□□□□□ -0.54
PTPN20-220ENST00000508715 CHMP2AO43633 222 aa11.67□□□□□ -0.54
PTPN20-220ENST00000508715 ZNF862O60290 1169 aa11.67□□□□□ -0.54
PTPN20-220ENST00000508715 F2P00734 622 aa11.67□□□□□ -0.54
PTPN20-220ENST00000508715 OR52Z1P0C646 297 aa11.67□□□□□ -0.54
PTPN20-220ENST00000508715 SUPT20HL2P0C7V6 817 aa11.67□□□□□ -0.54
PTPN20-220ENST00000508715 PDIA4P13667 645 aaKnown RBP11.67□□□□□ -0.54
PTPN20-220ENST00000508715 TXKP42681 527 aa11.67□□□□□ -0.54
PTPN20-220ENST00000508715 CDK7P50613 346 aa11.67□□□□□ -0.54
PTPN20-220ENST00000508715 KRT76Q01546 638 aa11.67□□□□□ -0.54
PTPN20-220ENST00000508715 SNX17Q15036 470 aa11.67□□□□□ -0.54
PTPN20-220ENST00000508715 DGKDQ16760 1214 aa11.67□□□□□ -0.54
PTPN20-220ENST00000508715 FOXD4L6Q3SYB3 417 aaPredicted RBP11.67□□□□□ -0.54
PTPN20-220ENST00000508715 UTP14CQ5TAP6 766 aaKnown RBP11.67□□□□□ -0.54
PTPN20-220ENST00000508715 FOXD4L3Q6VB84 417 aaPredicted RBP11.67□□□□□ -0.54
PTPN20-220ENST00000508715 PCSK9Q8NBP7 692 aaKnown RBP11.67□□□□□ -0.54
PTPN20-220ENST00000508715 CTAGE1Q96RT6 745 aa11.67□□□□□ -0.54
PTPN20-220ENST00000508715 TEKT3Q9BXF9 490 aa11.67□□□□□ -0.54
PTPN20-220ENST00000508715 SENP6Q9GZR1 1112 aaPredicted RBP11.67□□□□□ -0.54
PTPN20-220ENST00000508715 RNPEPQ9H4A4 650 aa11.67□□□□□ -0.54
PTPN20-220ENST00000508715 C11orf49Q9H6J7 331 aa11.67□□□□□ -0.54
PTPN20-220ENST00000508715 DISC1Q9NRI5 854 aa11.67□□□□□ -0.54
PTPN20-220ENST00000508715 POLR3EQ9NVU0 708 aa11.67□□□□□ -0.54
PTPN20-220ENST00000508715 WRAP73Q9P2S5 460 aaPredicted RBP11.67□□□□□ -0.54
PTPN20-220ENST00000508715 TET1Q8NFU7 2136 aa11.66□□□□□ -0.54
PTPN20-220ENST00000508715 TNRC18O15417 2968 aaPredicted RBP11.66□□□□□ -0.54
PTPN20-220ENST00000508715 NOP56O00567 594 aaKnown RBP11.66□□□□□ -0.54
PTPN20-220ENST00000508715 CAPN2P17655 700 aa11.66□□□□□ -0.54
PTPN20-220ENST00000508715 NASPP49321 788 aaPredicted RBP11.66□□□□□ -0.54
PTPN20-220ENST00000508715 PSEN2P49810 448 aa11.66□□□□□ -0.54
PTPN20-220ENST00000508715 CEBPZQ03701 1054 aaKnown RBP11.66□□□□□ -0.54
PTPN20-220ENST00000508715 DNM1Q05193 864 aaKnown RBP11.66□□□□□ -0.54
PTPN20-220ENST00000508715 LRRC26Q2I0M4 334 aa11.66□□□□□ -0.54
PTPN20-220ENST00000508715 NBPF20Q3BBV1 942 aa11.66□□□□□ -0.54
PTPN20-220ENST00000508715 SWSAP1Q6NVH7 229 aa11.66□□□□□ -0.54
PTPN20-220ENST00000508715 SLC39A5Q6ZMH5 540 aa11.66□□□□□ -0.54
PTPN20-220ENST00000508715 SLFN12Q8IYM2 578 aa11.66□□□□□ -0.54
PTPN20-220ENST00000508715 IGSF22Q8N9C0 903 aa11.66□□□□□ -0.54
PTPN20-220ENST00000508715 IPO9Q96P70 1041 aaKnown RBP11.66□□□□□ -0.54
PTPN20-220ENST00000508715 HSD17B14Q9BPX1 270 aa11.66□□□□□ -0.54
PTPN20-220ENST00000508715 MTG1Q9BT17 334 aaPredicted RBP11.66□□□□□ -0.54
PTPN20-220ENST00000508715 RGL1Q9NZL6 768 aa11.66□□□□□ -0.54
PTPN20-220ENST00000508715 PCDH10Q9P2E7 1040 aa11.66□□□□□ -0.54
PTPN20-220ENST00000508715 DAXXQ9UER7 740 aaPredicted RBP11.66□□□□□ -0.54
PTPN20-220ENST00000508715 PCDHA12Q9UN75 941 aa11.66□□□□□ -0.54
PTPN20-220ENST00000508715 PCDHA10Q9Y5I2 948 aa11.66□□□□□ -0.54
PTPN20-220ENST00000508715 MAFBQ9Y5Q3 323 aaPredicted RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms