RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 SMOC1Q9H4F8 434 aa6.14□□□□□ -1.43
PDLIM5-211ENST00000508531 RBPJLQ9UBG7 517 aa6.14□□□□□ -1.43
PDLIM5-211ENST00000508531 R3HCC1Q9Y3T6 440 aaKnown RBP6.14□□□□□ -1.43
PDLIM5-211ENST00000508531 FHAD1B1AJZ9 1412 aa6.14□□□□□ -1.43
PDLIM5-211ENST00000508531 SLC27A2O14975 620 aa6.13□□□□□ -1.43
PDLIM5-211ENST00000508531 LAMTOR5O43504 91 aa6.13□□□□□ -1.43
PDLIM5-211ENST00000508531 DNAJA1P31689 397 aaKnown RBP6.13□□□□□ -1.43
PDLIM5-211ENST00000508531 DEKP35659 375 aaKnown RBP6.13□□□□□ -1.43
PDLIM5-211ENST00000508531 MCF2L2Q86YR7 1114 aa6.13□□□□□ -1.43
PDLIM5-211ENST00000508531 PIP4K2CQ8TBX8 421 aa6.13□□□□□ -1.43
PDLIM5-211ENST00000508531 PHOSPHO1Q8TCT1 267 aa6.13□□□□□ -1.43
PDLIM5-211ENST00000508531 MBD6Q96DN6 1003 aa6.13□□□□□ -1.43
PDLIM5-211ENST00000508531 PPP4R1LQ9P1A2 415 aa6.13□□□□□ -1.43
PDLIM5-211ENST00000508531 ASH2LQ9UBL3 628 aa6.13□□□□□ -1.43
PDLIM5-211ENST00000508531 KRIT1O00522 736 aa6.12□□□□□ -1.43
PDLIM5-211ENST00000508531 MATN3O15232 486 aa6.12□□□□□ -1.43
PDLIM5-211ENST00000508531 DLX3O60479 287 aa6.12□□□□□ -1.43
PDLIM5-211ENST00000508531 MAFKO60675 156 aa6.12□□□□□ -1.43
PDLIM5-211ENST00000508531 CYP7B1O75881 506 aa6.12□□□□□ -1.43
PDLIM5-211ENST00000508531 TNFRSF1AP19438 455 aa6.12□□□□□ -1.43
PDLIM5-211ENST00000508531 PTPRMP28827 1452 aa6.12□□□□□ -1.43
PDLIM5-211ENST00000508531 ADAMTS12P58397 1594 aa6.12□□□□□ -1.43
PDLIM5-211ENST00000508531 GRIN1Q05586 938 aa6.12□□□□□ -1.43
PDLIM5-211ENST00000508531 SURF1Q15526 300 aa6.12□□□□□ -1.43
PDLIM5-211ENST00000508531 ARID4BQ4LE39 1312 aaPredicted RBP6.12□□□□□ -1.43
PDLIM5-211ENST00000508531 PHF19Q5T6S3 580 aa6.12□□□□□ -1.43
PDLIM5-211ENST00000508531 TRMT10BQ6PF06 316 aaKnown RBP6.12□□□□□ -1.43
PDLIM5-211ENST00000508531 PLEKHH3Q7Z736 793 aa6.12□□□□□ -1.43
PDLIM5-211ENST00000508531 ABCA10Q8WWZ4 1543 aa6.12□□□□□ -1.43
PDLIM5-211ENST00000508531 ABCA5Q8WWZ7 1642 aa6.12□□□□□ -1.43
PDLIM5-211ENST00000508531 PHF20Q9BVI0 1012 aa6.12□□□□□ -1.43
PDLIM5-211ENST00000508531 SLC6A20Q9NP91 592 aa6.12□□□□□ -1.43
PDLIM5-211ENST00000508531 GPR27Q9NS67 375 aa6.12□□□□□ -1.43
PDLIM5-211ENST00000508531 PTPRGP23470 1445 aa6.11□□□□□ -1.43
PDLIM5-211ENST00000508531 ANKS3Q6ZW76 656 aa6.11□□□□□ -1.43
PDLIM5-211ENST00000508531 PROSER1Q86XN7 944 aa6.11□□□□□ -1.43
PDLIM5-211ENST00000508531 RBM12BQ8IXT5 1001 aaKnown RBP6.11□□□□□ -1.43
PDLIM5-211ENST00000508531 IGDCC4Q8TDY8 1250 aa6.11□□□□□ -1.43
PDLIM5-211ENST00000508531 CLEC4DQ8WXI8 215 aa6.11□□□□□ -1.43
PDLIM5-211ENST00000508531 WRNIP1Q96S55 665 aa6.11□□□□□ -1.43
PDLIM5-211ENST00000508531 C1QTNF3Q9BXJ4 246 aa6.11□□□□□ -1.43
PDLIM5-211ENST00000508531 FTSJ1Q9UET6 329 aa6.11□□□□□ -1.43
PDLIM5-211ENST00000508531 CDK11AQ9UQ88 783 aaPredicted RBP6.11□□□□□ -1.43
PDLIM5-211ENST00000508531 ZXDAP98168 799 aa6.1□□□□□ -1.43
PDLIM5-211ENST00000508531 HSP90AA2PQ14568 343 aaPredicted RBP6.1□□□□□ -1.43
PDLIM5-211ENST00000508531 DDR2Q16832 855 aa6.1□□□□□ -1.43
PDLIM5-211ENST00000508531 CYP4F22Q6NT55 531 aa6.1□□□□□ -1.43
PDLIM5-211ENST00000508531 KCNT2Q6UVM3 1135 aa6.1□□□□□ -1.43
PDLIM5-211ENST00000508531 OTOP3Q7RTS5 596 aa6.1□□□□□ -1.43
PDLIM5-211ENST00000508531 KBTBD2Q8IY47 623 aa6.1□□□□□ -1.43
PDLIM5-211ENST00000508531 DVL3Q92997 716 aaPredicted RBP6.1□□□□□ -1.43
PDLIM5-211ENST00000508531 PKNOX2Q96KN3 472 aa6.1□□□□□ -1.43
PDLIM5-211ENST00000508531 ZDHHC9Q9Y397 364 aa6.1□□□□□ -1.43
PDLIM5-211ENST00000508531 PLB1Q6P1J6 1458 aa6.09□□□□□ -1.43
PDLIM5-211ENST00000508531 NPEPPSL1A6NEC2 478 aa6.09□□□□□ -1.43
PDLIM5-211ENST00000508531 C1QTNF3-AMACRE9PGA6 284 aa6.09□□□□□ -1.43
PDLIM5-211ENST00000508531 PRODHO43272 600 aa6.09□□□□□ -1.43
PDLIM5-211ENST00000508531 LTFP02788 710 aa6.09□□□□□ -1.43
PDLIM5-211ENST00000508531 ICAM4Q14773 271 aa6.09□□□□□ -1.43
PDLIM5-211ENST00000508531 VASNQ6EMK4 673 aa6.09□□□□□ -1.43
PDLIM5-211ENST00000508531 PKN3Q6P5Z2 889 aa6.09□□□□□ -1.43
PDLIM5-211ENST00000508531 ARHGEF18Q6ZSZ5 1173 aa6.09□□□□□ -1.43
PDLIM5-211ENST00000508531 TRIM48Q8IWZ4 208 aa6.09□□□□□ -1.43
PDLIM5-211ENST00000508531 KLHL36Q8N4N3 616 aa6.09□□□□□ -1.43
PDLIM5-211ENST00000508531 KCNJ15Q99712 375 aa6.09□□□□□ -1.43
PDLIM5-211ENST00000508531 AARSD1Q9BTE6 412 aaKnown RBP6.09□□□□□ -1.43
PDLIM5-211ENST00000508531 JADE2Q9NQC1 790 aa6.09□□□□□ -1.43
PDLIM5-211ENST00000508531 PCF11O94913 1555 aaKnown RBP6.09□□□□□ -1.43
PDLIM5-211ENST00000508531 KIF21BO75037 1637 aa6.08□□□□□ -1.44
PDLIM5-211ENST00000508531 B4GALT4O60513 344 aa6.08□□□□□ -1.44
PDLIM5-211ENST00000508531 COL6A1P12109 1028 aa6.08□□□□□ -1.44
PDLIM5-211ENST00000508531 COL6A2P12110 1019 aa6.08□□□□□ -1.44
PDLIM5-211ENST00000508531 GRK2P25098 689 aa6.08□□□□□ -1.44
PDLIM5-211ENST00000508531 GRK3P35626 688 aa6.08□□□□□ -1.44
PDLIM5-211ENST00000508531 PPP2CBP62714 309 aa6.08□□□□□ -1.44
PDLIM5-211ENST00000508531 PPP2CAP67775 309 aa6.08□□□□□ -1.44
PDLIM5-211ENST00000508531 NFATC3Q12968 1075 aa6.08□□□□□ -1.44
PDLIM5-211ENST00000508531 TUSC3Q13454 348 aa6.08□□□□□ -1.44
PDLIM5-211ENST00000508531 NTRK3Q16288 839 aa6.08□□□□□ -1.44
PDLIM5-211ENST00000508531 RSPO2Q6UXX9 243 aaPredicted RBP6.08□□□□□ -1.44
PDLIM5-211ENST00000508531 LBX2Q6XYB7 198 aa6.08□□□□□ -1.44
PDLIM5-211ENST00000508531 DTX3Q8N9I9 347 aa6.08□□□□□ -1.44
PDLIM5-211ENST00000508531 NUDT10Q8NFP7 164 aa6.08□□□□□ -1.44
PDLIM5-211ENST00000508531 TTLL11Q8NHH1 800 aa6.08□□□□□ -1.44
PDLIM5-211ENST00000508531 ZNF428Q96B54 188 aa6.08□□□□□ -1.44
PDLIM5-211ENST00000508531 NUDT11Q96G61 164 aa6.08□□□□□ -1.44
PDLIM5-211ENST00000508531 PTPN18Q99952 460 aa6.08□□□□□ -1.44
PDLIM5-211ENST00000508531 BARX1Q9HBU1 254 aaPredicted RBP6.08□□□□□ -1.44
PDLIM5-211ENST00000508531 DLL4Q9NR61 685 aa6.08□□□□□ -1.44
PDLIM5-211ENST00000508531 ARHGEF4Q9NR80 690 aa6.08□□□□□ -1.44
PDLIM5-211ENST00000508531 HSPBP1Q9NZL4 362 aa6.08□□□□□ -1.44
PDLIM5-211ENST00000508531 USP35Q9P2H5 1018 aa6.08□□□□□ -1.44
PDLIM5-211ENST00000508531 TEX14Q8IWB6 1497 aa6.08□□□□□ -1.44
PDLIM5-211ENST00000508531 GLI2P10070 1586 aa6.07□□□□□ -1.44
PDLIM5-211ENST00000508531 BLACEA4D250 179 aa6.07□□□□□ -1.44
PDLIM5-211ENST00000508531 GPR42O15529 346 aa6.07□□□□□ -1.44
PDLIM5-211ENST00000508531 EPHB4P54760 987 aa6.07□□□□□ -1.44
PDLIM5-211ENST00000508531 KIZQ2M2Z5 673 aa6.07□□□□□ -1.44
PDLIM5-211ENST00000508531 CIR1Q86X95 450 aaPredicted RBP6.07□□□□□ -1.44
PDLIM5-211ENST00000508531 UHMK1Q8TAS1 419 aaKnown RBP6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms