RNA–Protein interactions for RNA: ENST00000507875.5

CLCN3-206, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2

Gene CLCN3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-206ENST00000507875 POLLQ9UGP5 575 aa8.15□□□□□ -1.1
CLCN3-206ENST00000507875 ZNF532Q9HCE3 1301 aa8.15□□□□□ -1.1
CLCN3-206ENST00000507875 DYTNA2CJ06 578 aa8.14□□□□□ -1.11
CLCN3-206ENST00000507875 TNKSO95271 1327 aa8.14□□□□□ -1.11
CLCN3-206ENST00000507875 ITPKAP23677 461 aa8.14□□□□□ -1.11
CLCN3-206ENST00000507875 RBBP8NLQ8NC74 664 aaPredicted RBP8.14□□□□□ -1.11
CLCN3-206ENST00000507875 WDR19Q8NEZ3 1342 aa8.14□□□□□ -1.11
CLCN3-206ENST00000507875 OR13H1Q8NG92 308 aa8.14□□□□□ -1.11
CLCN3-206ENST00000507875 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.14□□□□□ -1.11
CLCN3-206ENST00000507875 NACAP1Q9BZK3 213 aa8.14□□□□□ -1.11
CLCN3-206ENST00000507875 ZNF576Q9H609 170 aa8.14□□□□□ -1.11
CLCN3-206ENST00000507875 ARHGEF4Q9NR80 690 aa8.14□□□□□ -1.11
CLCN3-206ENST00000507875 A0A1W2PNR3 127 aa8.14□□□□□ -1.11
CLCN3-206ENST00000507875 EGFRP00533 1210 aa8.14□□□□□ -1.11
CLCN3-206ENST00000507875 HSPD1P10809 573 aaKnown RBP8.14□□□□□ -1.11
CLCN3-206ENST00000507875 PCP11498 1178 aaKnown RBP8.14□□□□□ -1.11
CLCN3-206ENST00000507875 SETDB1Q15047 1291 aa8.14□□□□□ -1.11
CLCN3-206ENST00000507875 CREB3L3Q68CJ9 461 aa8.14□□□□□ -1.11
CLCN3-206ENST00000507875 NAA16Q6N069 864 aaPredicted RBP8.14□□□□□ -1.11
CLCN3-206ENST00000507875 REXO1Q8N1G1 1221 aaKnown RBP8.14□□□□□ -1.11
CLCN3-206ENST00000507875 MAGEB6Q8N7X4 407 aa8.14□□□□□ -1.11
CLCN3-206ENST00000507875 ANP32BQ92688 251 aaKnown RBP8.14□□□□□ -1.11
CLCN3-206ENST00000507875 OSBP2Q969R2 916 aa8.14□□□□□ -1.11
CLCN3-206ENST00000507875 TRIM44Q96DX7 344 aaPredicted RBP8.14□□□□□ -1.11
CLCN3-206ENST00000507875 GBP4Q96PP9 640 aa8.14□□□□□ -1.11
CLCN3-206ENST00000507875 SENP7Q9BQF6 1050 aa8.14□□□□□ -1.11
CLCN3-206ENST00000507875 NOL10Q9BSC4 688 aaKnown RBP8.14□□□□□ -1.11
CLCN3-206ENST00000507875 TAOK3Q9H2K8 898 aa8.14□□□□□ -1.11
CLCN3-206ENST00000507875 RAI14Q9P0K7 980 aa8.14□□□□□ -1.11
CLCN3-206ENST00000507875 SWAP70Q9UH65 585 aa8.14□□□□□ -1.11
CLCN3-206ENST00000507875 TRHDEQ9UKU6 1024 aa8.14□□□□□ -1.11
CLCN3-206ENST00000507875 SNX14Q9Y5W7 946 aa8.14□□□□□ -1.11
CLCN3-206ENST00000507875 MYO3BQ8WXR4 1341 aa8.13□□□□□ -1.11
CLCN3-206ENST00000507875 SLC27A2O14975 620 aa8.13□□□□□ -1.11
CLCN3-206ENST00000507875 GPAA1O43292 621 aa8.13□□□□□ -1.11
CLCN3-206ENST00000507875 TOMM70O94826 608 aa8.13□□□□□ -1.11
CLCN3-206ENST00000507875 RRM1P23921 792 aa8.13□□□□□ -1.11
CLCN3-206ENST00000507875 TMPRSS15P98073 1019 aa8.13□□□□□ -1.11
CLCN3-206ENST00000507875 PTH1RQ03431 593 aa8.13□□□□□ -1.11
CLCN3-206ENST00000507875 KIAA2012Q0VF49 1180 aa8.13□□□□□ -1.11
CLCN3-206ENST00000507875 ANKRD1Q15327 319 aa8.13□□□□□ -1.11
CLCN3-206ENST00000507875 IMMTQ16891 758 aaKnown RBP8.13□□□□□ -1.11
CLCN3-206ENST00000507875 C1QTNF12Q5T7M4 302 aa8.13□□□□□ -1.11
CLCN3-206ENST00000507875 EEPD1Q7L9B9 569 aa8.13□□□□□ -1.11
CLCN3-206ENST00000507875 TTC30AQ86WT1 665 aa8.13□□□□□ -1.11
CLCN3-206ENST00000507875 SAMD3Q8N6K7 520 aa8.13□□□□□ -1.11
CLCN3-206ENST00000507875 PDILTQ8N807 584 aa8.13□□□□□ -1.11
CLCN3-206ENST00000507875 KLHL6Q8WZ60 621 aa8.13□□□□□ -1.11
CLCN3-206ENST00000507875 STRBPQ96SI9 672 aaKnown RBP8.13□□□□□ -1.11
CLCN3-206ENST00000507875 CEP44Q9C0F1 390 aa8.13□□□□□ -1.11
CLCN3-206ENST00000507875 SLC5A4Q9NY91 659 aa8.13□□□□□ -1.11
CLCN3-206ENST00000507875 ZNF180Q9UJW8 692 aa8.13□□□□□ -1.11
CLCN3-206ENST00000507875 MRPS23Q9Y3D9 190 aaKnown RBP8.13□□□□□ -1.11
CLCN3-206ENST00000507875 DDX60LQ5H9U9 1706 aaKnown RBP8.13□□□□□ -1.11
CLCN3-206ENST00000507875 MYH1P12882 1939 aa8.13□□□□□ -1.11
CLCN3-206ENST00000507875 A0A096LPE4 126 aa8.13□□□□□ -1.11
CLCN3-206ENST00000507875 A0A1W2PPZ6 126 aa8.13□□□□□ -1.11
CLCN3-206ENST00000507875 PHF20L1A8MW92 1017 aa8.13□□□□□ -1.11
CLCN3-206ENST00000507875 M0R2C6 588 aa8.13□□□□□ -1.11
CLCN3-206ENST00000507875 SNAP23O00161 211 aa8.13□□□□□ -1.11
CLCN3-206ENST00000507875 SUSD5O60279 629 aa8.13□□□□□ -1.11
CLCN3-206ENST00000507875 BAG3O95817 575 aa8.13□□□□□ -1.11
CLCN3-206ENST00000507875 CYP7A1P22680 504 aa8.13□□□□□ -1.11
CLCN3-206ENST00000507875 TRAPPC10P48553 1259 aa8.13□□□□□ -1.11
CLCN3-206ENST00000507875 RASSF7Q02833 373 aa8.13□□□□□ -1.11
CLCN3-206ENST00000507875 HGSNATQ68CP4 663 aa8.13□□□□□ -1.11
CLCN3-206ENST00000507875 KIAA1211LQ6NV74 962 aa8.13□□□□□ -1.11
CLCN3-206ENST00000507875 ZNF589Q86UQ0 364 aaPredicted RBP8.13□□□□□ -1.11
CLCN3-206ENST00000507875 SYNPOQ8N3V7 929 aa8.13□□□□□ -1.11
CLCN3-206ENST00000507875 FBXL16Q8N461 479 aa8.13□□□□□ -1.11
CLCN3-206ENST00000507875 SVIPQ8NHG7 77 aa8.13□□□□□ -1.11
CLCN3-206ENST00000507875 NSUN4Q96CB9 384 aaKnown RBP8.13□□□□□ -1.11
CLCN3-206ENST00000507875 SCYL1Q96KG9 808 aa8.13□□□□□ -1.11
CLCN3-206ENST00000507875 RSPH9Q9H1X1 276 aaPredicted RBP8.13□□□□□ -1.11
CLCN3-206ENST00000507875 IL25Q9H293 177 aa8.13□□□□□ -1.11
CLCN3-206ENST00000507875 RUBCNLQ9H714 662 aa8.13□□□□□ -1.11
CLCN3-206ENST00000507875 ISY1Q9ULR0 285 aaKnown RBP8.13□□□□□ -1.11
CLCN3-206ENST00000507875 GUCY2CP25092 1073 aa8.12□□□□□ -1.11
CLCN3-206ENST00000507875 NEK4P51957 841 aa8.12□□□□□ -1.11
CLCN3-206ENST00000507875 WDR4P57081 412 aaKnown RBP8.12□□□□□ -1.11
CLCN3-206ENST00000507875 SFSWAPQ12872 951 aaKnown RBP8.12□□□□□ -1.11
CLCN3-206ENST00000507875 STAT4Q14765 748 aa8.12□□□□□ -1.11
CLCN3-206ENST00000507875 VPS53Q5VIR6 699 aa8.12□□□□□ -1.11
CLCN3-206ENST00000507875 STRIP1Q5VSL9 837 aa8.12□□□□□ -1.11
CLCN3-206ENST00000507875 CLEC17AQ6ZS10 378 aa8.12□□□□□ -1.11
CLCN3-206ENST00000507875 TXNRD3Q86VQ6 643 aa8.12□□□□□ -1.11
CLCN3-206ENST00000507875 ANKLE1Q8NAG6 615 aa8.12□□□□□ -1.11
CLCN3-206ENST00000507875 VPS37AQ8NEZ2 397 aa8.12□□□□□ -1.11
CLCN3-206ENST00000507875 RSPH1Q8WYR4 309 aa8.12□□□□□ -1.11
CLCN3-206ENST00000507875 ZSCAN31Q96LW9 406 aaPredicted RBP8.12□□□□□ -1.11
CLCN3-206ENST00000507875 ATP8A2Q9NTI2 1148 aa8.12□□□□□ -1.11
CLCN3-206ENST00000507875 PALD1Q9ULE6 856 aa8.12□□□□□ -1.11
CLCN3-206ENST00000507875 KLRK1P26718 216 aa8.12□□□□□ -1.11
CLCN3-206ENST00000507875 POLR2BP30876 1174 aaKnown RBP8.12□□□□□ -1.11
CLCN3-206ENST00000507875 RPS26P62854 115 aaKnown RBP8.12□□□□□ -1.11
CLCN3-206ENST00000507875 NUCB2P80303 420 aa8.12□□□□□ -1.11
CLCN3-206ENST00000507875 MAP2K1Q02750 393 aaPredicted RBP8.12□□□□□ -1.11
CLCN3-206ENST00000507875 FGD2Q7Z6J4 655 aa8.12□□□□□ -1.11
CLCN3-206ENST00000507875 DZIP1Q86YF9 867 aaKnown RBP8.12□□□□□ -1.11
CLCN3-206ENST00000507875 RIN3Q8TB24 985 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms