RNA–Protein interactions for RNA: ENST00000506714.5

HERC6-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 2

Gene HERC6, Length 2,293 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-206ENST00000506714 FAM153CQ494X1 144 aa16.52■□□□□ 0.23
HERC6-206ENST00000506714 ASPRV1Q53RT3 343 aa16.52■□□□□ 0.23
HERC6-206ENST00000506714 TTC19Q6DKK2 380 aaPredicted RBP16.52■□□□□ 0.23
HERC6-206ENST00000506714 PPP1R18Q6NYC8 613 aa16.52■□□□□ 0.23
HERC6-206ENST00000506714 ZNF804AQ7Z570 1209 aa16.52■□□□□ 0.23
HERC6-206ENST00000506714 YTHDF3Q7Z739 585 aaKnown RBP16.52■□□□□ 0.23
HERC6-206ENST00000506714 CCDC65Q8IXS2 484 aa16.52■□□□□ 0.23
HERC6-206ENST00000506714 USP38Q8NB14 1042 aa16.52■□□□□ 0.23
HERC6-206ENST00000506714 CEP95Q96GE4 821 aa16.52■□□□□ 0.23
HERC6-206ENST00000506714 ATP6V1G3Q96LB4 118 aa16.52■□□□□ 0.23
HERC6-206ENST00000506714 CEP89Q96ST8 783 aa16.52■□□□□ 0.23
HERC6-206ENST00000506714 RTFDC1Q9BY42 306 aaPredicted RBP16.52■□□□□ 0.23
HERC6-206ENST00000506714 FAM153AQ9UHL3 310 aa16.52■□□□□ 0.23
HERC6-206ENST00000506714 SLC26A4O43511 780 aa16.51■□□□□ 0.23
HERC6-206ENST00000506714 FTCDO95954 541 aa16.51■□□□□ 0.23
HERC6-206ENST00000506714 HSPA9P38646 679 aaKnown RBP16.51■□□□□ 0.23
HERC6-206ENST00000506714 KCTD16Q68DU8 428 aa16.51■□□□□ 0.23
HERC6-206ENST00000506714 LRIG3Q6UXM1 1119 aa16.51■□□□□ 0.23
HERC6-206ENST00000506714 ARFGAP2Q8N6H7 521 aa16.51■□□□□ 0.23
HERC6-206ENST00000506714 CASKIN2Q8WXE0 1202 aa16.51■□□□□ 0.23
HERC6-206ENST00000506714 PIK3R5Q8WYR1 880 aa16.51■□□□□ 0.23
HERC6-206ENST00000506714 PBKQ96KB5 322 aa16.51■□□□□ 0.23
HERC6-206ENST00000506714 RNPC3Q96LT9 517 aaKnown RBP16.51■□□□□ 0.23
HERC6-206ENST00000506714 NUDT12Q9BQG2 462 aa16.51■□□□□ 0.23
HERC6-206ENST00000506714 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.51■□□□□ 0.23
HERC6-206ENST00000506714 ANKIB1Q9P2G1 1089 aa16.51■□□□□ 0.23
HERC6-206ENST00000506714 GGA2Q9UJY4 613 aa16.51■□□□□ 0.23
HERC6-206ENST00000506714 TMEM59LQ9UK28 342 aa16.51■□□□□ 0.23
HERC6-206ENST00000506714 SAMM50Q9Y512 469 aa16.51■□□□□ 0.23
HERC6-206ENST00000506714 GOLGA6L10A6NI86 522 aa16.5■□□□□ 0.23
HERC6-206ENST00000506714 USP17L5A8MUK1 530 aa16.5■□□□□ 0.23
HERC6-206ENST00000506714 MEFVO15553 781 aaPredicted RBP16.5■□□□□ 0.23
HERC6-206ENST00000506714 TM4SF1P30408 202 aa16.5■□□□□ 0.23
HERC6-206ENST00000506714 ATP1A2P50993 1020 aa16.5■□□□□ 0.23
HERC6-206ENST00000506714 CUL1Q13616 776 aa16.5■□□□□ 0.23
HERC6-206ENST00000506714 RAPGEF1Q13905 1077 aa16.5■□□□□ 0.23
HERC6-206ENST00000506714 ASIC2Q16515 512 aa16.5■□□□□ 0.23
HERC6-206ENST00000506714 HYIQ5T013 277 aa16.5■□□□□ 0.23
HERC6-206ENST00000506714 SWT1Q5T5J6 900 aaKnown RBP16.5■□□□□ 0.23
HERC6-206ENST00000506714 KCNK18Q7Z418 384 aa16.5■□□□□ 0.23
HERC6-206ENST00000506714 SH2D3CQ8N5H7 860 aa16.5■□□□□ 0.23
HERC6-206ENST00000506714 OTUD6BQ8N6M0 293 aa16.5■□□□□ 0.23
HERC6-206ENST00000506714 NAP1L4Q99733 375 aaKnown RBP16.5■□□□□ 0.23
HERC6-206ENST00000506714 UBA5Q9GZZ9 404 aa16.5■□□□□ 0.23
HERC6-206ENST00000506714 ISCUQ9H1K1 167 aa16.5■□□□□ 0.23
HERC6-206ENST00000506714 TAF1DQ9H5J8 278 aaPredicted RBP16.5■□□□□ 0.23
HERC6-206ENST00000506714 BZW2Q9Y6E2 419 aaKnown RBP16.5■□□□□ 0.23
HERC6-206ENST00000506714 A0A087X0T9 212 aa16.5■□□□□ 0.23
HERC6-206ENST00000506714 GPR75-ASB3A0A0A6YYF3 556 aa16.5■□□□□ 0.23
HERC6-206ENST00000506714 PPP1R37O75864 691 aa16.5■□□□□ 0.23
HERC6-206ENST00000506714 FAM228BP0C875 321 aa16.5■□□□□ 0.23
HERC6-206ENST00000506714 MYBP10242 640 aa16.5■□□□□ 0.23
HERC6-206ENST00000506714 PDHBP11177 359 aa16.5■□□□□ 0.23
HERC6-206ENST00000506714 GCFC2P16383 781 aaKnown RBP16.5■□□□□ 0.23
HERC6-206ENST00000506714 ERCC3P19447 782 aa16.5■□□□□ 0.23
HERC6-206ENST00000506714 EPS15P42566 896 aa16.5■□□□□ 0.23
HERC6-206ENST00000506714 BTDP43251 543 aa16.5■□□□□ 0.23
HERC6-206ENST00000506714 RPS6KA1Q15418 735 aa16.5■□□□□ 0.23
HERC6-206ENST00000506714 MCTP2Q6DN12 878 aa16.5■□□□□ 0.23
HERC6-206ENST00000506714 TMC4Q7Z404 712 aa16.5■□□□□ 0.23
HERC6-206ENST00000506714 TEX11Q8IYF3 940 aa16.5■□□□□ 0.23
HERC6-206ENST00000506714 GLIS3Q8NEA6 775 aa16.5■□□□□ 0.23
HERC6-206ENST00000506714 RABEP2Q9H5N1 569 aa16.5■□□□□ 0.23
HERC6-206ENST00000506714 ESYT3A0FGR9 886 aa16.49■□□□□ 0.23
HERC6-206ENST00000506714 EDIL3O43854 480 aa16.49■□□□□ 0.23
HERC6-206ENST00000506714 MDH1P40925 334 aaKnown RBP16.49■□□□□ 0.23
HERC6-206ENST00000506714 GUCY2FP51841 1108 aa16.49■□□□□ 0.23
HERC6-206ENST00000506714 C15orf52Q6ZUT6 534 aaKnown RBP16.49■□□□□ 0.23
HERC6-206ENST00000506714 GPIHBP1Q8IV16 184 aa16.49■□□□□ 0.23
HERC6-206ENST00000506714 ZC3H3Q8IXZ2 948 aaKnown RBP16.49■□□□□ 0.23
HERC6-206ENST00000506714 CCDC24Q8N4L8 307 aa16.49■□□□□ 0.23
HERC6-206ENST00000506714 PLCB1Q9NQ66 1216 aa16.49■□□□□ 0.23
HERC6-206ENST00000506714 ZSCAN5CA6NGD5 496 aaPredicted RBP16.49■□□□□ 0.23
HERC6-206ENST00000506714 MARCH6O60337 910 aa16.49■□□□□ 0.23
HERC6-206ENST00000506714 HMGB2P26583 209 aaKnown RBP16.49■□□□□ 0.23
HERC6-206ENST00000506714 NFIXQ14938 502 aa16.49■□□□□ 0.23
HERC6-206ENST00000506714 PTGISQ16647 500 aa16.49■□□□□ 0.23
HERC6-206ENST00000506714 EDRF1Q3B7T1 1238 aa16.49■□□□□ 0.23
HERC6-206ENST00000506714 CNPY4Q8N129 248 aa16.49■□□□□ 0.23
HERC6-206ENST00000506714 COA7Q96BR5 231 aa16.49■□□□□ 0.23
HERC6-206ENST00000506714 LRRC45Q96CN5 670 aa16.49■□□□□ 0.23
HERC6-206ENST00000506714 CALR3Q96L12 384 aaKnown RBP16.49■□□□□ 0.23
HERC6-206ENST00000506714 ADAMTS1Q9UHI8 967 aa16.49■□□□□ 0.23
HERC6-206ENST00000506714 DDX25Q9UHL0 483 aaKnown RBP16.49■□□□□ 0.23
HERC6-206ENST00000506714 PCDHA12Q9UN75 941 aa16.49■□□□□ 0.23
HERC6-206ENST00000506714 ATP8B3O60423 1300 aa16.49■□□□□ 0.23
HERC6-206ENST00000506714 PLIN4Q96Q06 1357 aa16.48■□□□□ 0.23
HERC6-206ENST00000506714 RAD51CO43502 376 aa16.48■□□□□ 0.23
HERC6-206ENST00000506714 FSBPO95073 299 aa16.48■□□□□ 0.23
HERC6-206ENST00000506714 GRIK5Q16478 980 aa16.48■□□□□ 0.23
HERC6-206ENST00000506714 SLF2Q8IX21 1173 aa16.48■□□□□ 0.23
HERC6-206ENST00000506714 ACTRT1Q8TDG2 376 aa16.48■□□□□ 0.23
HERC6-206ENST00000506714 KAT2BQ92831 832 aa16.48■□□□□ 0.23
HERC6-206ENST00000506714 FOCADQ5VW36 1801 aa16.48■□□□□ 0.23
HERC6-206ENST00000506714 CETN3O15182 167 aa16.48■□□□□ 0.23
HERC6-206ENST00000506714 APBA3O96018 575 aa16.48■□□□□ 0.23
HERC6-206ENST00000506714 ANXA13P27216 316 aa16.48■□□□□ 0.23
HERC6-206ENST00000506714 TNNI2P48788 182 aa16.48■□□□□ 0.23
HERC6-206ENST00000506714 USP11P51784 963 aa16.48■□□□□ 0.23
HERC6-206ENST00000506714 ECM1Q16610 540 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms