RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 LLPHQ9BRT6 129 aaKnown RBP8.29□□□□□ -1.08
GYPB-206ENST00000506516 TMEM260Q9NX78 707 aa8.29□□□□□ -1.08
GYPB-206ENST00000506516 PCDHA4Q9UN74 947 aa8.29□□□□□ -1.08
GYPB-206ENST00000506516 A0A0U1RQG5 324 aaPredicted RBP8.28□□□□□ -1.08
GYPB-206ENST00000506516 BHMG1C9JSJ3 638 aaPredicted RBP8.28□□□□□ -1.08
GYPB-206ENST00000506516 NOP56O00567 594 aaKnown RBP8.28□□□□□ -1.08
GYPB-206ENST00000506516 CTAGE5O15320 804 aa8.28□□□□□ -1.08
GYPB-206ENST00000506516 PPFIA4O75335 1185 aa8.28□□□□□ -1.08
GYPB-206ENST00000506516 RGS20O76081 388 aa8.28□□□□□ -1.08
GYPB-206ENST00000506516 CTDNEP1O95476 244 aa8.28□□□□□ -1.08
GYPB-206ENST00000506516 GGPS1O95749 300 aa8.28□□□□□ -1.08
GYPB-206ENST00000506516 MYL3P08590 195 aa8.28□□□□□ -1.08
GYPB-206ENST00000506516 USP11P51784 963 aa8.28□□□□□ -1.08
GYPB-206ENST00000506516 ARHGAP1Q07960 439 aa8.28□□□□□ -1.08
GYPB-206ENST00000506516 MTMR1Q13613 665 aa8.28□□□□□ -1.08
GYPB-206ENST00000506516 TRIM29Q14134 588 aa8.28□□□□□ -1.08
GYPB-206ENST00000506516 DGKDQ16760 1214 aa8.28□□□□□ -1.08
GYPB-206ENST00000506516 LRRC26Q2I0M4 334 aa8.28□□□□□ -1.08
GYPB-206ENST00000506516 CELF3Q5SZQ8 465 aaKnown RBP8.28□□□□□ -1.08
GYPB-206ENST00000506516 SWT1Q5T5J6 900 aaKnown RBP8.28□□□□□ -1.08
GYPB-206ENST00000506516 MYSM1Q5VVJ2 828 aa8.28□□□□□ -1.08
GYPB-206ENST00000506516 CXCL17Q6UXB2 119 aa8.28□□□□□ -1.08
GYPB-206ENST00000506516 C7orf61Q8IZ16 206 aa8.28□□□□□ -1.08
GYPB-206ENST00000506516 BLIDQ8IZY5 108 aa8.28□□□□□ -1.08
GYPB-206ENST00000506516 NSUN7Q8NE18 718 aaKnown RBP8.28□□□□□ -1.08
GYPB-206ENST00000506516 AFG1LQ8WV93 481 aa8.28□□□□□ -1.08
GYPB-206ENST00000506516 PGBD1Q96JS3 809 aa8.28□□□□□ -1.08
GYPB-206ENST00000506516 MXRA8Q9BRK3 442 aa8.28□□□□□ -1.08
GYPB-206ENST00000506516 MTG1Q9BT17 334 aaPredicted RBP8.28□□□□□ -1.08
GYPB-206ENST00000506516 ALG1Q9BT22 464 aa8.28□□□□□ -1.08
GYPB-206ENST00000506516 ANO3Q9BYT9 981 aa8.28□□□□□ -1.08
GYPB-206ENST00000506516 JADE2Q9NQC1 790 aa8.28□□□□□ -1.08
GYPB-206ENST00000506516 PRKAG2Q9UGJ0 569 aa8.28□□□□□ -1.08
GYPB-206ENST00000506516 ATP11BQ9Y2G3 1177 aa8.28□□□□□ -1.08
GYPB-206ENST00000506516 UBIAD1Q9Y5Z9 338 aa8.28□□□□□ -1.08
GYPB-206ENST00000506516 SMCHD1A6NHR9 2005 aa8.28□□□□□ -1.08
GYPB-206ENST00000506516 MROH7Q68CQ1 1323 aa8.28□□□□□ -1.08
GYPB-206ENST00000506516 DCDC2CA8MYV0 355 aa8.27□□□□□ -1.09
GYPB-206ENST00000506516 ARVCFO00192 962 aa8.27□□□□□ -1.09
GYPB-206ENST00000506516 TLR3O15455 904 aaKnown RBP8.27□□□□□ -1.09
GYPB-206ENST00000506516 LARGE1O95461 756 aa8.27□□□□□ -1.09
GYPB-206ENST00000506516 CYP3A4P08684 503 aa8.27□□□□□ -1.09
GYPB-206ENST00000506516 ITGB5P18084 799 aa8.27□□□□□ -1.09
GYPB-206ENST00000506516 PTGS1P23219 599 aa8.27□□□□□ -1.09
GYPB-206ENST00000506516 SREBF1P36956 1147 aa8.27□□□□□ -1.09
GYPB-206ENST00000506516 RTP1P59025 263 aa8.27□□□□□ -1.09
GYPB-206ENST00000506516 HMGN5P82970 282 aaKnown RBP8.27□□□□□ -1.09
GYPB-206ENST00000506516 ARHGAP4P98171 946 aa8.27□□□□□ -1.09
GYPB-206ENST00000506516 SP2Q02086 613 aa8.27□□□□□ -1.09
GYPB-206ENST00000506516 ITGA7Q13683 1181 aa8.27□□□□□ -1.09
GYPB-206ENST00000506516 SNX17Q15036 470 aa8.27□□□□□ -1.09
GYPB-206ENST00000506516 CEP55Q53EZ4 464 aa8.27□□□□□ -1.09
GYPB-206ENST00000506516 METTL7BQ6UX53 244 aa8.27□□□□□ -1.09
GYPB-206ENST00000506516 CYFIP1Q7L576 1253 aa8.27□□□□□ -1.09
GYPB-206ENST00000506516 NIPA1Q7RTP0 329 aa8.27□□□□□ -1.09
GYPB-206ENST00000506516 CCDC83Q8IWF9 413 aa8.27□□□□□ -1.09
GYPB-206ENST00000506516 FAM184AQ8NB25 1140 aa8.27□□□□□ -1.09
GYPB-206ENST00000506516 RDH13Q8NBN7 331 aa8.27□□□□□ -1.09
GYPB-206ENST00000506516 PPTC7Q8NI37 304 aa8.27□□□□□ -1.09
GYPB-206ENST00000506516 PCMTD1Q96MG8 357 aaPredicted RBP8.27□□□□□ -1.09
GYPB-206ENST00000506516 SPATA33Q96N06 139 aa8.27□□□□□ -1.09
GYPB-206ENST00000506516 TOX2Q96NM4 488 aa8.27□□□□□ -1.09
GYPB-206ENST00000506516 AIFM3Q96NN9 605 aa8.27□□□□□ -1.09
GYPB-206ENST00000506516 PHF20Q9BVI0 1012 aa8.27□□□□□ -1.09
GYPB-206ENST00000506516 KATNAL1Q9BW62 490 aa8.27□□□□□ -1.09
GYPB-206ENST00000506516 BRMS1Q9HCU9 246 aa8.27□□□□□ -1.09
GYPB-206ENST00000506516 KCNJ14Q9UNX9 436 aa8.27□□□□□ -1.09
GYPB-206ENST00000506516 MYH6P13533 1939 aa8.27□□□□□ -1.09
GYPB-206ENST00000506516 BAZ2BQ9UIF8 2168 aaKnown RBP8.27□□□□□ -1.09
GYPB-206ENST00000506516 TNRC18O15417 2968 aaPredicted RBP8.26□□□□□ -1.09
GYPB-206ENST00000506516 CCDC194A0A1B0GVG4 234 aa8.26□□□□□ -1.09
GYPB-206ENST00000506516 H0YGN5 161 aa8.26□□□□□ -1.09
GYPB-206ENST00000506516 MEIS1O00470 390 aa8.26□□□□□ -1.09
GYPB-206ENST00000506516 HRO43593 1189 aa8.26□□□□□ -1.09
GYPB-206ENST00000506516 PQBP1O60828 265 aaKnown RBP8.26□□□□□ -1.09
GYPB-206ENST00000506516 ATP9AO75110 1047 aa8.26□□□□□ -1.09
GYPB-206ENST00000506516 MMP3P08254 477 aa8.26□□□□□ -1.09
GYPB-206ENST00000506516 FDPSP14324 419 aaKnown RBP8.26□□□□□ -1.09
GYPB-206ENST00000506516 UBA1P22314 1058 aaKnown RBP8.26□□□□□ -1.09
GYPB-206ENST00000506516 CDK7P50613 346 aa8.26□□□□□ -1.09
GYPB-206ENST00000506516 CHMP4BP1P59074 171 aa8.26□□□□□ -1.09
GYPB-206ENST00000506516 PURAQ00577 322 aaKnown RBP8.26□□□□□ -1.09
GYPB-206ENST00000506516 TLE2Q04725 743 aa8.26□□□□□ -1.09
GYPB-206ENST00000506516 SAFBQ15424 915 aaKnown RBP eCLIP8.26□□□□□ -1.09
GYPB-206ENST00000506516 HSDL1Q3SXM5 330 aa8.26□□□□□ -1.09
GYPB-206ENST00000506516 TRIM60Q495X7 471 aa8.26□□□□□ -1.09
GYPB-206ENST00000506516 PRPF38BQ5VTL8 546 aaKnown RBP8.26□□□□□ -1.09
GYPB-206ENST00000506516 ANKRD33Q7Z3H0 272 aa8.26□□□□□ -1.09
GYPB-206ENST00000506516 DAGLBQ8NCG7 672 aa8.26□□□□□ -1.09
GYPB-206ENST00000506516 LBHD1Q9BQE6 289 aaPredicted RBP8.26□□□□□ -1.09
GYPB-206ENST00000506516 SDF4Q9BRK5 362 aa8.26□□□□□ -1.09
GYPB-206ENST00000506516 KCNH7Q9NS40 1196 aa8.26□□□□□ -1.09
GYPB-206ENST00000506516 KIF3AQ9Y496 699 aa8.26□□□□□ -1.09
GYPB-206ENST00000506516 KIAA0100Q14667 2235 aaKnown RBP8.26□□□□□ -1.09
GYPB-206ENST00000506516 M0R2N6 131 aa8.25□□□□□ -1.09
GYPB-206ENST00000506516 SORBS3O60504 671 aa8.25□□□□□ -1.09
GYPB-206ENST00000506516 JAK2O60674 1132 aa8.25□□□□□ -1.09
GYPB-206ENST00000506516 CLTBP09497 229 aa8.25□□□□□ -1.09
GYPB-206ENST00000506516 SUPT20HL2P0C7V6 817 aa8.25□□□□□ -1.09
GYPB-206ENST00000506516 ARP10275 920 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms