RNA–Protein interactions for RNA: ENST00000506443.5

COPS4-204, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 4

Gene COPS4, Length 578 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-204ENST00000506443 NSUN6Q8TEA1 469 aaKnown RBP10.46□□□□□ -0.73
COPS4-204ENST00000506443 IWS1Q96ST2 819 aa10.46□□□□□ -0.73
COPS4-204ENST00000506443 C16orf70Q9BSU1 422 aa10.46□□□□□ -0.73
COPS4-204ENST00000506443 HELLSQ9NRZ9 838 aa10.46□□□□□ -0.73
COPS4-204ENST00000506443 CD207Q9UJ71 328 aa10.46□□□□□ -0.73
COPS4-204ENST00000506443 CIZ1Q9ULV3 898 aaPredicted RBP10.46□□□□□ -0.73
COPS4-204ENST00000506443 MRVI1Q9Y6F6 885 aa10.46□□□□□ -0.73
COPS4-204ENST00000506443 ADGRA3Q8IWK6 1321 aa10.46□□□□□ -0.73
COPS4-204ENST00000506443 NCOR2Q9Y618 2525 aa10.46□□□□□ -0.74
COPS4-204ENST00000506443 TTC3P53804 2025 aa10.45□□□□□ -0.74
COPS4-204ENST00000506443 KAT6AQ92794 2004 aa10.45□□□□□ -0.74
COPS4-204ENST00000506443 ZMYM6O95789 1325 aa10.45□□□□□ -0.74
COPS4-204ENST00000506443 PPFIA4O75335 1185 aa10.45□□□□□ -0.74
COPS4-204ENST00000506443 EIF3JO75822 258 aaKnown RBP10.45□□□□□ -0.74
COPS4-204ENST00000506443 SMIM10L2AP0DMW4 78 aa10.45□□□□□ -0.74
COPS4-204ENST00000506443 SMIM10L2BP0DMW5 78 aa10.45□□□□□ -0.74
COPS4-204ENST00000506443 HSPD1P10809 573 aaKnown RBP10.45□□□□□ -0.74
COPS4-204ENST00000506443 GHRP10912 638 aa10.45□□□□□ -0.74
COPS4-204ENST00000506443 MX1P20591 662 aa10.45□□□□□ -0.74
COPS4-204ENST00000506443 UBA1P22314 1058 aaKnown RBP10.45□□□□□ -0.74
COPS4-204ENST00000506443 HOXC8P31273 242 aa10.45□□□□□ -0.74
COPS4-204ENST00000506443 NDUFV1P49821 464 aa10.45□□□□□ -0.74
COPS4-204ENST00000506443 LAMC2Q13753 1193 aa10.45□□□□□ -0.74
COPS4-204ENST00000506443 GPATCH4Q5T3I0 446 aaKnown RBP10.45□□□□□ -0.74
COPS4-204ENST00000506443 MYSM1Q5VVJ2 828 aa10.45□□□□□ -0.74
COPS4-204ENST00000506443 RUFY4Q6ZNE9 571 aa10.45□□□□□ -0.74
COPS4-204ENST00000506443 IFNLR1Q8IU57 520 aaPredicted RBP10.45□□□□□ -0.74
COPS4-204ENST00000506443 PPTC7Q8NI37 304 aa10.45□□□□□ -0.74
COPS4-204ENST00000506443 FEZF2Q8TBJ5 459 aa10.45□□□□□ -0.74
COPS4-204ENST00000506443 SPOCK2Q92563 424 aa10.45□□□□□ -0.74
COPS4-204ENST00000506443 FAM227BQ96M60 508 aa10.45□□□□□ -0.74
COPS4-204ENST00000506443 RMDN3Q96TC7 470 aa10.45□□□□□ -0.74
COPS4-204ENST00000506443 APOL5Q9BWW9 433 aa10.45□□□□□ -0.74
COPS4-204ENST00000506443 USP15Q9Y4E8 981 aaPredicted RBP10.45□□□□□ -0.74
COPS4-204ENST00000506443 MRPL42Q9Y6G3 142 aaKnown RBP10.45□□□□□ -0.74
COPS4-204ENST00000506443 A0A0D9SFI3 127 aa10.44□□□□□ -0.74
COPS4-204ENST00000506443 LOC730098B7Z3J9 87 aa10.44□□□□□ -0.74
COPS4-204ENST00000506443 PPP1R11O60927 126 aaPredicted RBP10.44□□□□□ -0.74
COPS4-204ENST00000506443 GGPS1O95749 300 aa10.44□□□□□ -0.74
COPS4-204ENST00000506443 ITGB1P05556 798 aa10.44□□□□□ -0.74
COPS4-204ENST00000506443 NR3C2P08235 984 aa10.44□□□□□ -0.74
COPS4-204ENST00000506443 GHRHRQ02643 423 aa10.44□□□□□ -0.74
COPS4-204ENST00000506443 ADAM15Q13444 863 aa10.44□□□□□ -0.74
COPS4-204ENST00000506443 QRICH1Q2TAL8 776 aa10.44□□□□□ -0.74
COPS4-204ENST00000506443 MCMDC2Q4G0Z9 681 aa10.44□□□□□ -0.74
COPS4-204ENST00000506443 BMP8AQ7Z5Y6 402 aa10.44□□□□□ -0.74
COPS4-204ENST00000506443 RBM23Q86U06 439 aaKnown RBP10.44□□□□□ -0.74
COPS4-204ENST00000506443 ZNF589Q86UQ0 364 aaPredicted RBP10.44□□□□□ -0.74
COPS4-204ENST00000506443 DGKHQ86XP1 1220 aa10.44□□□□□ -0.74
COPS4-204ENST00000506443 SUGP1Q8IWZ8 645 aaKnown RBP10.44□□□□□ -0.74
COPS4-204ENST00000506443 ADGRF4Q8IZF3 695 aa10.44□□□□□ -0.74
COPS4-204ENST00000506443 FIBCD1Q8N539 461 aa10.44□□□□□ -0.74
COPS4-204ENST00000506443 SMRP1Q8NCR6 262 aa10.44□□□□□ -0.74
COPS4-204ENST00000506443 SEPT8Q92599 483 aa10.44□□□□□ -0.74
COPS4-204ENST00000506443 ATOH1Q92858 354 aaPredicted RBP10.44□□□□□ -0.74
COPS4-204ENST00000506443 ATP6V0A1Q93050 837 aa10.44□□□□□ -0.74
COPS4-204ENST00000506443 MARVELD3Q96A59 401 aa10.44□□□□□ -0.74
COPS4-204ENST00000506443 EVI5LQ96CN4 794 aa10.44□□□□□ -0.74
COPS4-204ENST00000506443 RPGRIP1Q96KN7 1286 aa10.44□□□□□ -0.74
COPS4-204ENST00000506443 PXMP2Q9NR77 195 aa10.44□□□□□ -0.74
COPS4-204ENST00000506443 SETD4Q9NVD3 440 aa10.44□□□□□ -0.74
COPS4-204ENST00000506443 CTNNA3Q9UI47 895 aa10.44□□□□□ -0.74
COPS4-204ENST00000506443 CACNA1BQ00975 2339 aa10.44□□□□□ -0.74
COPS4-204ENST00000506443 ABCB11O95342 1321 aa10.43□□□□□ -0.74
COPS4-204ENST00000506443 EMSYQ7Z589 1322 aa10.43□□□□□ -0.74
COPS4-204ENST00000506443 PRR23AA6NEV1 266 aa10.43□□□□□ -0.74
COPS4-204ENST00000506443 C5orf67F2Z3F1 127 aa10.43□□□□□ -0.74
COPS4-204ENST00000506443 KDM4AO75164 1064 aa10.43□□□□□ -0.74
COPS4-204ENST00000506443 MMP1P03956 469 aa10.43□□□□□ -0.74
COPS4-204ENST00000506443 LGALS2P05162 132 aa10.43□□□□□ -0.74
COPS4-204ENST00000506443 PCP11498 1178 aaKnown RBP10.43□□□□□ -0.74
COPS4-204ENST00000506443 MYCLP12524 364 aaPredicted RBP10.43□□□□□ -0.74
COPS4-204ENST00000506443 IBSPP21815 317 aaPredicted RBP10.43□□□□□ -0.74
COPS4-204ENST00000506443 HOXA13P31271 388 aaPredicted RBP10.43□□□□□ -0.74
COPS4-204ENST00000506443 BMPR1AP36894 532 aa10.43□□□□□ -0.74
COPS4-204ENST00000506443 NRIP1P48552 1158 aa10.43□□□□□ -0.74
COPS4-204ENST00000506443 PDAP1Q13442 181 aaKnown RBP10.43□□□□□ -0.74
COPS4-204ENST00000506443 SLC35G1Q2M3R5 365 aa10.43□□□□□ -0.74
COPS4-204ENST00000506443 PAN2Q504Q3 1202 aaKnown RBP10.43□□□□□ -0.74
COPS4-204ENST00000506443 MFSD6Q6ZSS7 791 aa10.43□□□□□ -0.74
COPS4-204ENST00000506443 TICAM2Q86XR7 235 aa10.43□□□□□ -0.74
COPS4-204ENST00000506443 SPATA33Q96N06 139 aa10.43□□□□□ -0.74
COPS4-204ENST00000506443 SAMD11Q96NU1 681 aa10.43□□□□□ -0.74
COPS4-204ENST00000506443 UPF3BQ9BZI7 483 aaKnown RBP10.43□□□□□ -0.74
COPS4-204ENST00000506443 RNPEPQ9H4A4 650 aa10.43□□□□□ -0.74
COPS4-204ENST00000506443 JMJD4Q9H9V9 463 aa10.43□□□□□ -0.74
COPS4-204ENST00000506443 FAM50BQ9Y247 325 aa10.43□□□□□ -0.74
COPS4-204ENST00000506443 DMXL1Q9Y485 3027 aa10.43□□□□□ -0.74
COPS4-204ENST00000506443 DNAH14Q0VDD8 3507 aa10.42□□□□□ -0.74
COPS4-204ENST00000506443 C17orf102A2RUQ5 167 aa10.42□□□□□ -0.74
COPS4-204ENST00000506443 PER2O15055 1255 aa10.42□□□□□ -0.74
COPS4-204ENST00000506443 CHRNA1P02708 482 aa10.42□□□□□ -0.74
COPS4-204ENST00000506443 AVPR2P30518 371 aa10.42□□□□□ -0.74
COPS4-204ENST00000506443 HSD17B4P51659 736 aa10.42□□□□□ -0.74
COPS4-204ENST00000506443 PDE1AP54750 535 aa10.42□□□□□ -0.74
COPS4-204ENST00000506443 SP4Q02446 784 aa10.42□□□□□ -0.74
COPS4-204ENST00000506443 SEMA3FQ13275 785 aa10.42□□□□□ -0.74
COPS4-204ENST00000506443 CELF3Q5SZQ8 465 aaKnown RBP10.42□□□□□ -0.74
COPS4-204ENST00000506443 ARHGEF16Q5VV41 709 aa10.42□□□□□ -0.74
COPS4-204ENST00000506443 STOX1Q6ZVD7 989 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms