RNA–Protein interactions for RNA: ENST00000506163.5

SMN1-204, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN1, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-204ENST00000506163 LLPHQ9BRT6 129 aaKnown RBP20.28■□□□□ 0.84
SMN1-204ENST00000506163 SLC9A2Q9UBY0 812 aa20.28■□□□□ 0.84
SMN1-204ENST00000506163 TDP2O95551 362 aa20.27■□□□□ 0.84
SMN1-204ENST00000506163 NR5A1Q13285 461 aa20.27■□□□□ 0.84
SMN1-204ENST00000506163 INF2Q27J81 1249 aa20.27■□□□□ 0.84
SMN1-204ENST00000506163 MFSD5Q6N075 450 aa20.27■□□□□ 0.84
SMN1-204ENST00000506163 C16orf59Q7L2K0 433 aa20.27■□□□□ 0.84
SMN1-204ENST00000506163 KATNAL1Q9BW62 490 aa20.27■□□□□ 0.84
SMN1-204ENST00000506163 WNT8AQ9H1J5 351 aa20.27■□□□□ 0.84
SMN1-204ENST00000506163 HIPK3Q9H422 1215 aa20.27■□□□□ 0.84
SMN1-204ENST00000506163 RNPEPQ9H4A4 650 aa20.27■□□□□ 0.84
SMN1-204ENST00000506163 DDX39AO00148 427 aaKnown RBP20.27■□□□□ 0.83
SMN1-204ENST00000506163 IPO5O00410 1097 aaKnown RBP20.27■□□□□ 0.83
SMN1-204ENST00000506163 MSH4O15457 936 aa20.27■□□□□ 0.83
SMN1-204ENST00000506163 XBP1P17861 261 aa20.27■□□□□ 0.83
SMN1-204ENST00000506163 HOXC8P31273 242 aa20.27■□□□□ 0.83
SMN1-204ENST00000506163 ACTR2P61160 394 aa20.27■□□□□ 0.83
SMN1-204ENST00000506163 NONOQ15233 471 aaKnown RBP eCLIP20.27■□□□□ 0.83
SMN1-204ENST00000506163 PTGISQ16647 500 aa20.27■□□□□ 0.83
SMN1-204ENST00000506163 C9orf50Q5SZB4 431 aa20.27■□□□□ 0.83
SMN1-204ENST00000506163 KRT40Q6A162 431 aa20.27■□□□□ 0.83
SMN1-204ENST00000506163 C7orf31Q8N865 590 aa20.27■□□□□ 0.83
SMN1-204ENST00000506163 DHX38Q92620 1227 aaKnown RBP20.27■□□□□ 0.83
SMN1-204ENST00000506163 WNT8BQ93098 351 aa20.27■□□□□ 0.83
SMN1-204ENST00000506163 MBOAT7Q96N66 472 aa20.27■□□□□ 0.83
SMN1-204ENST00000506163 CYP3A7-CYP3A51PA0A087WV96 503 aa20.26■□□□□ 0.83
SMN1-204ENST00000506163 ST18O60284 1047 aa20.26■□□□□ 0.83
SMN1-204ENST00000506163 LGR5O75473 907 aa20.26■□□□□ 0.83
SMN1-204ENST00000506163 ATG7O95352 703 aa20.26■□□□□ 0.83
SMN1-204ENST00000506163 SUPT20HL2P0C7V6 817 aa20.26■□□□□ 0.83
SMN1-204ENST00000506163 SMIM10L2AP0DMW4 78 aa20.26■□□□□ 0.83
SMN1-204ENST00000506163 SMIM10L2BP0DMW5 78 aa20.26■□□□□ 0.83
SMN1-204ENST00000506163 CSF2RAP15509 400 aa20.26■□□□□ 0.83
SMN1-204ENST00000506163 CYP3A7P24462 503 aa20.26■□□□□ 0.83
SMN1-204ENST00000506163 CCL23P55773 120 aa20.26■□□□□ 0.83
SMN1-204ENST00000506163 KRT25Q7Z3Z0 450 aa20.26■□□□□ 0.83
SMN1-204ENST00000506163 TMX3Q96JJ7 454 aa20.26■□□□□ 0.83
SMN1-204ENST00000506163 SDF4Q9BRK5 362 aa20.26■□□□□ 0.83
SMN1-204ENST00000506163 ZNF577Q9BSK1 485 aa20.26■□□□□ 0.83
SMN1-204ENST00000506163 LAMA2P24043 3122 aaKnown RBP20.25■□□□□ 0.83
SMN1-204ENST00000506163 BTBD18B2RXH4 712 aa20.25■□□□□ 0.83
SMN1-204ENST00000506163 MMP1P03956 469 aa20.25■□□□□ 0.83
SMN1-204ENST00000506163 SETQ01105 290 aaPredicted RBP20.25■□□□□ 0.83
SMN1-204ENST00000506163 GUCY1B3Q02153 619 aa20.25■□□□□ 0.83
SMN1-204ENST00000506163 FPGSQ05932 587 aa20.25■□□□□ 0.83
SMN1-204ENST00000506163 SHHQ15465 462 aa20.25■□□□□ 0.83
SMN1-204ENST00000506163 PIK3AP1Q6ZUJ8 805 aa20.25■□□□□ 0.83
SMN1-204ENST00000506163 A0A1W2PPC1 479 aa20.24■□□□□ 0.83
SMN1-204ENST00000506163 KRT2P35908 639 aa20.24■□□□□ 0.83
SMN1-204ENST00000506163 Q4G0T1 1027 aa20.24■□□□□ 0.83
SMN1-204ENST00000506163 ABHD15Q6UXT9 468 aa20.24■□□□□ 0.83
SMN1-204ENST00000506163 TDHQ8IZJ6 230 aa20.24■□□□□ 0.83
SMN1-204ENST00000506163 SCLYQ96I15 445 aa20.24■□□□□ 0.83
SMN1-204ENST00000506163 SETD4Q9NVD3 440 aa20.24■□□□□ 0.83
SMN1-204ENST00000506163 SZT2Q5T011 3432 aa20.23■□□□□ 0.83
SMN1-204ENST00000506163 IGKV6D-21A0A0A0MT36 114 aa20.23■□□□□ 0.83
SMN1-204ENST00000506163 CCDC194A0A1B0GVG4 234 aa20.23■□□□□ 0.83
SMN1-204ENST00000506163 SOX1O00570 391 aaPredicted RBP20.23■□□□□ 0.83
SMN1-204ENST00000506163 WNT7AO00755 349 aa20.23■□□□□ 0.83
SMN1-204ENST00000506163 SLC37A4O43826 429 aa20.23■□□□□ 0.83
SMN1-204ENST00000506163 ACRP10323 421 aa20.23■□□□□ 0.83
SMN1-204ENST00000506163 MARK3P27448 753 aa20.23■□□□□ 0.83
SMN1-204ENST00000506163 FXR1P51114 621 aaKnown RBP eCLIP20.23■□□□□ 0.83
SMN1-204ENST00000506163 ADAM17P78536 824 aa20.23■□□□□ 0.83
SMN1-204ENST00000506163 TRIM71Q2Q1W2 868 aaKnown RBP20.23■□□□□ 0.83
SMN1-204ENST00000506163 DIS3L2Q8IYB7 885 aaKnown RBP20.23■□□□□ 0.83
SMN1-204ENST00000506163 SLC5A5Q92911 643 aa20.23■□□□□ 0.83
SMN1-204ENST00000506163 EMSYQ7Z589 1322 aa20.22■□□□□ 0.83
SMN1-204ENST00000506163 GPNMBQ14956 572 aa20.22■□□□□ 0.83
SMN1-204ENST00000506163 LETM2Q2VYF4 491 aa20.22■□□□□ 0.83
SMN1-204ENST00000506163 MOXD1Q6UVY6 613 aa20.22■□□□□ 0.83
SMN1-204ENST00000506163 ETNPPLQ8TBG4 499 aa20.22■□□□□ 0.83
SMN1-204ENST00000506163 GLG1Q92896 1179 aa20.22■□□□□ 0.83
SMN1-204ENST00000506163 SMARCAD1Q9H4L7 1026 aa20.22■□□□□ 0.83
SMN1-204ENST00000506163 TBC1D22BQ9NU19 505 aa20.22■□□□□ 0.83
SMN1-204ENST00000506163 C17orf102A2RUQ5 167 aa20.21■□□□□ 0.83
SMN1-204ENST00000506163 TREHO43280 583 aa20.21■□□□□ 0.83
SMN1-204ENST00000506163 TRAF7Q6Q0C0 670 aa20.21■□□□□ 0.83
SMN1-204ENST00000506163 NEK8Q86SG6 692 aa20.21■□□□□ 0.83
SMN1-204ENST00000506163 CCDC60Q8IWA6 550 aaPredicted RBP20.21■□□□□ 0.83
SMN1-204ENST00000506163 TMEM199Q8N511 208 aa20.21■□□□□ 0.83
SMN1-204ENST00000506163 ERAP1Q9NZ08 941 aa20.21■□□□□ 0.83
SMN1-204ENST00000506163 ZNF215Q9UL58 517 aaPredicted RBP20.21■□□□□ 0.83
SMN1-204ENST00000506163 NOD1Q9Y239 953 aa20.21■□□□□ 0.83
SMN1-204ENST00000506163 SCN5AQ14524 2016 aa20.21■□□□□ 0.83
SMN1-204ENST00000506163 PSMD10O75832 226 aa20.2■□□□□ 0.82
SMN1-204ENST00000506163 IQCF3P0C7M6 154 aa20.2■□□□□ 0.82
SMN1-204ENST00000506163 ATP4AP20648 1035 aa20.2■□□□□ 0.82
SMN1-204ENST00000506163 HMGN5P82970 282 aaKnown RBP20.2■□□□□ 0.82
SMN1-204ENST00000506163 PLCB4Q15147 1175 aa20.2■□□□□ 0.82
SMN1-204ENST00000506163 TMEM240Q5SV17 173 aa20.2■□□□□ 0.82
SMN1-204ENST00000506163 PLPPR4Q7Z2D5 763 aa20.2■□□□□ 0.82
SMN1-204ENST00000506163 SERINC5Q86VE9 423 aa20.2■□□□□ 0.82
SMN1-204ENST00000506163 IL27Q8NEV9 243 aa20.2■□□□□ 0.82
SMN1-204ENST00000506163 FBXO18Q8NFZ0 1043 aa20.2■□□□□ 0.82
SMN1-204ENST00000506163 LMBR1Q8WVP7 490 aa20.2■□□□□ 0.82
SMN1-204ENST00000506163 ATP6V0A1Q93050 837 aa20.2■□□□□ 0.82
SMN1-204ENST00000506163 ZBTB10Q96DT7 871 aa20.2■□□□□ 0.82
SMN1-204ENST00000506163 C8orf76Q96K31 380 aa20.2■□□□□ 0.82
SMN1-204ENST00000506163 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms