RNA–Protein interactions for RNA: ENST00000505728.1

COL4A5-208, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-208ENST00000505728 ITGB5P18084 799 aa8.97□□□□□ -0.97
COL4A5-208ENST00000505728 SLC12A3P55017 1021 aa8.97□□□□□ -0.97
COL4A5-208ENST00000505728 FKBP1BP68106 108 aa8.97□□□□□ -0.97
COL4A5-208ENST00000505728 UBXN2AP68543 259 aa8.97□□□□□ -0.97
COL4A5-208ENST00000505728 EHHADHQ08426 723 aa8.97□□□□□ -0.97
COL4A5-208ENST00000505728 STK4Q13043 487 aa8.97□□□□□ -0.97
COL4A5-208ENST00000505728 PPIL2Q13356 520 aa8.97□□□□□ -0.97
COL4A5-208ENST00000505728 BAATQ14032 418 aaPredicted RBP8.97□□□□□ -0.97
COL4A5-208ENST00000505728 NR1I3Q14994 352 aa8.97□□□□□ -0.97
COL4A5-208ENST00000505728 TMEM132BQ14DG7 1078 aa8.97□□□□□ -0.97
COL4A5-208ENST00000505728 PGM5Q15124 567 aa8.97□□□□□ -0.97
COL4A5-208ENST00000505728 CCDC144BQ3MJ40 725 aa8.97□□□□□ -0.97
COL4A5-208ENST00000505728 ARHGEF16Q5VV41 709 aa8.97□□□□□ -0.97
COL4A5-208ENST00000505728 SNRNP48Q6IEG0 339 aaKnown RBP8.97□□□□□ -0.97
COL4A5-208ENST00000505728 POTEBQ6S5H4 581 aa8.97□□□□□ -0.97
COL4A5-208ENST00000505728 B3GNT9Q6UX72 402 aa8.97□□□□□ -0.97
COL4A5-208ENST00000505728 NSMFQ6X4W1 530 aa8.97□□□□□ -0.97
COL4A5-208ENST00000505728 LBX2Q6XYB7 198 aa8.97□□□□□ -0.97
COL4A5-208ENST00000505728 DYMQ7RTS9 669 aa8.97□□□□□ -0.97
COL4A5-208ENST00000505728 TMC6Q7Z403 805 aa8.97□□□□□ -0.97
COL4A5-208ENST00000505728 PRRT2Q7Z6L0 340 aaPredicted RBP8.97□□□□□ -0.97
COL4A5-208ENST00000505728 GPBP1Q86WP2 473 aa8.97□□□□□ -0.97
COL4A5-208ENST00000505728 LRRC8AQ8IWT6 810 aa8.97□□□□□ -0.97
COL4A5-208ENST00000505728 GUF1Q8N442 669 aaKnown RBP8.97□□□□□ -0.97
COL4A5-208ENST00000505728 CCDC150Q8NCX0 1101 aa8.97□□□□□ -0.97
COL4A5-208ENST00000505728 P2RX5Q93086 422 aa8.97□□□□□ -0.97
COL4A5-208ENST00000505728 DNAJC19Q96DA6 116 aa8.97□□□□□ -0.97
COL4A5-208ENST00000505728 ZNF830Q96NB3 372 aaPredicted RBP8.97□□□□□ -0.97
COL4A5-208ENST00000505728 NAP1L5Q96NT1 182 aaPredicted RBP8.97□□□□□ -0.97
COL4A5-208ENST00000505728 RMDN3Q96TC7 470 aa8.97□□□□□ -0.97
COL4A5-208ENST00000505728 PDCD2LQ9BRP1 358 aa8.97□□□□□ -0.97
COL4A5-208ENST00000505728 ACAD9Q9H845 621 aa8.97□□□□□ -0.97
COL4A5-208ENST00000505728 PXMP2Q9NR77 195 aa8.97□□□□□ -0.97
COL4A5-208ENST00000505728 HOMER2Q9NSB8 354 aa8.97□□□□□ -0.97
COL4A5-208ENST00000505728 TBC1D22BQ9NU19 505 aa8.97□□□□□ -0.97
COL4A5-208ENST00000505728 FBXO40Q9UH90 709 aa8.97□□□□□ -0.97
COL4A5-208ENST00000505728 RIPK3Q9Y572 518 aa8.97□□□□□ -0.97
COL4A5-208ENST00000505728 BRCA2P51587 3418 aa8.97□□□□□ -0.97
COL4A5-208ENST00000505728 MKI67P46013 3256 aaKnown RBP8.97□□□□□ -0.97
COL4A5-208ENST00000505728 IPO5O00410 1097 aaKnown RBP8.96□□□□□ -0.98
COL4A5-208ENST00000505728 IRF6O14896 467 aa8.96□□□□□ -0.98
COL4A5-208ENST00000505728 NRDCO43847 1150 aa8.96□□□□□ -0.98
COL4A5-208ENST00000505728 STAM2O75886 525 aa8.96□□□□□ -0.98
COL4A5-208ENST00000505728 SLITRK3O94933 977 aa8.96□□□□□ -0.98
COL4A5-208ENST00000505728 KIF20AO95235 890 aa8.96□□□□□ -0.98
COL4A5-208ENST00000505728 FGFR1OPO95684 399 aaKnown RBP8.96□□□□□ -0.98
COL4A5-208ENST00000505728 SSBP05455 408 aaKnown RBP eCLIP8.96□□□□□ -0.98
COL4A5-208ENST00000505728 IDEP14735 1019 aa8.96□□□□□ -0.98
COL4A5-208ENST00000505728 CYP11B2P19099 503 aa8.96□□□□□ -0.98
COL4A5-208ENST00000505728 EEF1GP26641 437 aaKnown RBP8.96□□□□□ -0.98
COL4A5-208ENST00000505728 CCND2P30279 289 aa8.96□□□□□ -0.98
COL4A5-208ENST00000505728 COPB2P35606 906 aa8.96□□□□□ -0.98
COL4A5-208ENST00000505728 MRPS9P82933 396 aaKnown RBP8.96□□□□□ -0.98
COL4A5-208ENST00000505728 COASYQ13057 564 aa8.96□□□□□ -0.98
COL4A5-208ENST00000505728 PABPC4Q13310 644 aaKnown RBP eCLIP8.96□□□□□ -0.98
COL4A5-208ENST00000505728 TTLL12Q14166 644 aaPredicted RBP8.96□□□□□ -0.98
COL4A5-208ENST00000505728 LDLRAD1Q5T700 205 aa8.96□□□□□ -0.98
COL4A5-208ENST00000505728 CENPPQ6IPU0 288 aa8.96□□□□□ -0.98
COL4A5-208ENST00000505728 TTI2Q6NXR4 508 aa8.96□□□□□ -0.98
COL4A5-208ENST00000505728 GADL1Q6ZQY3 521 aa8.96□□□□□ -0.98
COL4A5-208ENST00000505728 FASTKD5Q7L8L6 764 aaKnown RBP8.96□□□□□ -0.98
COL4A5-208ENST00000505728 FILIP1Q7Z7B0 1213 aa8.96□□□□□ -0.98
COL4A5-208ENST00000505728 NLRX1Q86UT6 975 aa8.96□□□□□ -0.98
COL4A5-208ENST00000505728 VSIG10LQ86VR7 867 aa8.96□□□□□ -0.98
COL4A5-208ENST00000505728 RIOX2Q8IUF8 465 aa8.96□□□□□ -0.98
COL4A5-208ENST00000505728 FAM114A1Q8IWE2 563 aa8.96□□□□□ -0.98
COL4A5-208ENST00000505728 KIAA1524Q8TCG1 905 aa8.96□□□□□ -0.98
COL4A5-208ENST00000505728 NSUN6Q8TEA1 469 aaKnown RBP8.96□□□□□ -0.98
COL4A5-208ENST00000505728 CACTINQ8WUQ7 758 aaKnown RBP8.96□□□□□ -0.98
COL4A5-208ENST00000505728 WNK4Q96J92 1243 aa8.96□□□□□ -0.98
COL4A5-208ENST00000505728 NACC1Q96RE7 527 aa8.96□□□□□ -0.98
COL4A5-208ENST00000505728 UIMC1Q96RL1 719 aa8.96□□□□□ -0.98
COL4A5-208ENST00000505728 KCNF1Q9H3M0 494 aa8.96□□□□□ -0.98
COL4A5-208ENST00000505728 ELP3Q9H9T3 547 aa8.96□□□□□ -0.98
COL4A5-208ENST00000505728 AGO4Q9HCK5 861 aaKnown RBP8.96□□□□□ -0.98
COL4A5-208ENST00000505728 SLC39A2Q9NP94 309 aa8.96□□□□□ -0.98
COL4A5-208ENST00000505728 KCNH7Q9NS40 1196 aa8.96□□□□□ -0.98
COL4A5-208ENST00000505728 PANK4Q9NVE7 773 aa8.96□□□□□ -0.98
COL4A5-208ENST00000505728 ADD3Q9UEY8 706 aaKnown RBP8.96□□□□□ -0.98
COL4A5-208ENST00000505728 RBBP6Q7Z6E9 1792 aaKnown RBP8.96□□□□□ -0.98
COL4A5-208ENST00000505728 LOXHD1Q8IVV2 1947 aa8.95□□□□□ -0.98
COL4A5-208ENST00000505728 FRMD3A2A2Y4 597 aa8.95□□□□□ -0.98
COL4A5-208ENST00000505728 POTEFA5A3E0 1075 aa8.95□□□□□ -0.98
COL4A5-208ENST00000505728 DHX15O43143 795 aaKnown RBP8.95□□□□□ -0.98
COL4A5-208ENST00000505728 TBC1D8O95759 1140 aa8.95□□□□□ -0.98
COL4A5-208ENST00000505728 KRT18P05783 430 aaKnown RBP8.95□□□□□ -0.98
COL4A5-208ENST00000505728 P4HBP07237 508 aaKnown RBP8.95□□□□□ -0.98
COL4A5-208ENST00000505728 NR3C2P08235 984 aa8.95□□□□□ -0.98
COL4A5-208ENST00000505728 FCER1AP12319 257 aa8.95□□□□□ -0.98
COL4A5-208ENST00000505728 EIF2AK2P19525 551 aaKnown RBP8.95□□□□□ -0.98
COL4A5-208ENST00000505728 OSBPP22059 807 aa8.95□□□□□ -0.98
COL4A5-208ENST00000505728 COPB1P53618 953 aaKnown RBP8.95□□□□□ -0.98
COL4A5-208ENST00000505728 SOX10P56693 466 aa8.95□□□□□ -0.98
COL4A5-208ENST00000505728 PSMC6P62333 389 aa8.95□□□□□ -0.98
COL4A5-208ENST00000505728 IRX3P78415 501 aaPredicted RBP8.95□□□□□ -0.98
COL4A5-208ENST00000505728 TBX2Q13207 712 aaPredicted RBP8.95□□□□□ -0.98
COL4A5-208ENST00000505728 GIT2Q14161 759 aa8.95□□□□□ -0.98
COL4A5-208ENST00000505728 TCP11X2Q5H9J9 407 aa8.95□□□□□ -0.98
COL4A5-208ENST00000505728 FAM26FQ5R3K3 315 aa8.95□□□□□ -0.98
COL4A5-208ENST00000505728 POTEGQ6S5H5 508 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms