RNA–Protein interactions for RNA: ENST00000505564.2

AC012339.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC012339.1, Length 941 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC012339.1-201ENST00000505564 TMEM260Q9NX78 707 aa12□□□□□ -0.49
AC012339.1-201ENST00000505564 TCEAL9Q9UHQ7 104 aa12□□□□□ -0.49
AC012339.1-201ENST00000505564 TSR3Q9UJK0 312 aaKnown RBP12□□□□□ -0.49
AC012339.1-201ENST00000505564 PCDHA4Q9UN74 947 aa12□□□□□ -0.49
AC012339.1-201ENST00000505564 ATP11BQ9Y2G3 1177 aa12□□□□□ -0.49
AC012339.1-201ENST00000505564 ELP1O95163 1332 aa12□□□□□ -0.49
AC012339.1-201ENST00000505564 MROH7Q68CQ1 1323 aa12□□□□□ -0.49
AC012339.1-201ENST00000505564 TRIOBPQ9H2D6 2365 aa12□□□□□ -0.49
AC012339.1-201ENST00000505564 A0A0U1RQG5 324 aaPredicted RBP11.99□□□□□ -0.49
AC012339.1-201ENST00000505564 CCDC194A0A1B0GVG4 234 aa11.99□□□□□ -0.49
AC012339.1-201ENST00000505564 DCDC2CA8MYV0 355 aa11.99□□□□□ -0.49
AC012339.1-201ENST00000505564 SPATA31C2B4DYI2 1134 aa11.99□□□□□ -0.49
AC012339.1-201ENST00000505564 TLR3O15455 904 aaKnown RBP11.99□□□□□ -0.49
AC012339.1-201ENST00000505564 ARIH2O95376 493 aa11.99□□□□□ -0.49
AC012339.1-201ENST00000505564 LARGE1O95461 756 aa11.99□□□□□ -0.49
AC012339.1-201ENST00000505564 GGPS1O95749 300 aa11.99□□□□□ -0.49
AC012339.1-201ENST00000505564 ICAM3P32942 547 aa11.99□□□□□ -0.49
AC012339.1-201ENST00000505564 CLK2P49760 499 aaKnown RBP11.99□□□□□ -0.49
AC012339.1-201ENST00000505564 SAFBQ15424 915 aaKnown RBP eCLIP11.99□□□□□ -0.49
AC012339.1-201ENST00000505564 CXCL17Q6UXB2 119 aa11.99□□□□□ -0.49
AC012339.1-201ENST00000505564 C7orf61Q8IZ16 206 aa11.99□□□□□ -0.49
AC012339.1-201ENST00000505564 COPS5Q92905 334 aa11.99□□□□□ -0.49
AC012339.1-201ENST00000505564 EMID1Q96A84 441 aaPredicted RBP11.99□□□□□ -0.49
AC012339.1-201ENST00000505564 PGBD1Q96JS3 809 aa11.99□□□□□ -0.49
AC012339.1-201ENST00000505564 SPATA33Q96N06 139 aa11.99□□□□□ -0.49
AC012339.1-201ENST00000505564 MTG1Q9BT17 334 aaPredicted RBP11.99□□□□□ -0.49
AC012339.1-201ENST00000505564 MYADML2A6NDP7 307 aa11.98□□□□□ -0.49
AC012339.1-201ENST00000505564 A6NJR5 290 aa11.98□□□□□ -0.49
AC012339.1-201ENST00000505564 CTDNEP1O95476 244 aa11.98□□□□□ -0.49
AC012339.1-201ENST00000505564 UBA1P22314 1058 aaKnown RBP11.98□□□□□ -0.49
AC012339.1-201ENST00000505564 CHMP4BP1P59074 171 aa11.98□□□□□ -0.49
AC012339.1-201ENST00000505564 ARHGAP1Q07960 439 aa11.98□□□□□ -0.49
AC012339.1-201ENST00000505564 GNL2Q13823 731 aaKnown RBP11.98□□□□□ -0.49
AC012339.1-201ENST00000505564 LRRC26Q2I0M4 334 aa11.98□□□□□ -0.49
AC012339.1-201ENST00000505564 CEP55Q53EZ4 464 aa11.98□□□□□ -0.49
AC012339.1-201ENST00000505564 CELF3Q5SZQ8 465 aaKnown RBP11.98□□□□□ -0.49
AC012339.1-201ENST00000505564 CCSAPQ6IQ19 270 aaPredicted RBP11.98□□□□□ -0.49
AC012339.1-201ENST00000505564 KRT25Q7Z3Z0 450 aa11.98□□□□□ -0.49
AC012339.1-201ENST00000505564 DAGLBQ8NCG7 672 aa11.98□□□□□ -0.49
AC012339.1-201ENST00000505564 NSUN7Q8NE18 718 aaKnown RBP11.98□□□□□ -0.49
AC012339.1-201ENST00000505564 PPTC7Q8NI37 304 aa11.98□□□□□ -0.49
AC012339.1-201ENST00000505564 AFG1LQ8WV93 481 aa11.98□□□□□ -0.49
AC012339.1-201ENST00000505564 AIFM3Q96NN9 605 aa11.98□□□□□ -0.49
AC012339.1-201ENST00000505564 SENP7Q9BQF6 1050 aa11.98□□□□□ -0.49
AC012339.1-201ENST00000505564 MXRA8Q9BRK3 442 aa11.98□□□□□ -0.49
AC012339.1-201ENST00000505564 SDF4Q9BRK5 362 aa11.98□□□□□ -0.49
AC012339.1-201ENST00000505564 KATNAL1Q9BW62 490 aa11.98□□□□□ -0.49
AC012339.1-201ENST00000505564 JADE2Q9NQC1 790 aa11.98□□□□□ -0.49
AC012339.1-201ENST00000505564 UBIAD1Q9Y5Z9 338 aa11.98□□□□□ -0.49
AC012339.1-201ENST00000505564 LCTP09848 1927 aa11.98□□□□□ -0.49
AC012339.1-201ENST00000505564 TULP1O00294 542 aaPredicted RBP11.97□□□□□ -0.49
AC012339.1-201ENST00000505564 SORBS3O60504 671 aa11.97□□□□□ -0.49
AC012339.1-201ENST00000505564 PQBP1O60828 265 aaKnown RBP11.97□□□□□ -0.49
AC012339.1-201ENST00000505564 PPFIA4O75335 1185 aa11.97□□□□□ -0.49
AC012339.1-201ENST00000505564 RGS20O76081 388 aa11.97□□□□□ -0.49
AC012339.1-201ENST00000505564 MMP3P08254 477 aa11.97□□□□□ -0.49
AC012339.1-201ENST00000505564 KRT2P35908 639 aa11.97□□□□□ -0.49
AC012339.1-201ENST00000505564 USP11P51784 963 aa11.97□□□□□ -0.49
AC012339.1-201ENST00000505564 RTP1P59025 263 aa11.97□□□□□ -0.49
AC012339.1-201ENST00000505564 SETQ01105 290 aaPredicted RBP11.97□□□□□ -0.49
AC012339.1-201ENST00000505564 ITGA7Q13683 1181 aa11.97□□□□□ -0.49
AC012339.1-201ENST00000505564 HIC1Q14526 733 aa11.97□□□□□ -0.49
AC012339.1-201ENST00000505564 NONOQ15233 471 aaKnown RBP eCLIP11.97□□□□□ -0.49
AC012339.1-201ENST00000505564 TMEM63BQ5T3F8 832 aa11.97□□□□□ -0.49
AC012339.1-201ENST00000505564 C1orf53Q5VUE5 145 aa11.97□□□□□ -0.49
AC012339.1-201ENST00000505564 MYSM1Q5VVJ2 828 aa11.97□□□□□ -0.49
AC012339.1-201ENST00000505564 METTL7BQ6UX53 244 aa11.97□□□□□ -0.49
AC012339.1-201ENST00000505564 CYFIP1Q7L576 1253 aa11.97□□□□□ -0.49
AC012339.1-201ENST00000505564 NIPA1Q7RTP0 329 aa11.97□□□□□ -0.49
AC012339.1-201ENST00000505564 C8orf76Q96K31 380 aa11.97□□□□□ -0.49
AC012339.1-201ENST00000505564 NAP1L4Q99733 375 aaKnown RBP11.97□□□□□ -0.49
AC012339.1-201ENST00000505564 PHF20Q9BVI0 1012 aa11.97□□□□□ -0.49
AC012339.1-201ENST00000505564 KCNJ14Q9UNX9 436 aa11.97□□□□□ -0.49
AC012339.1-201ENST00000505564 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.97□□□□□ -0.49
AC012339.1-201ENST00000505564 MCM3APO60318 1980 aa11.97□□□□□ -0.49
AC012339.1-201ENST00000505564 LRRC37A2A6NM11 1700 aa11.97□□□□□ -0.49
AC012339.1-201ENST00000505564 FRMPD3Q5JV73 1810 aa11.96□□□□□ -0.49
AC012339.1-201ENST00000505564 ARVCFO00192 962 aa11.96□□□□□ -0.49
AC012339.1-201ENST00000505564 CTAGE5O15320 804 aa11.96□□□□□ -0.49
AC012339.1-201ENST00000505564 JAK2O60674 1132 aa11.96□□□□□ -0.49
AC012339.1-201ENST00000505564 CYP3A4P08684 503 aa11.96□□□□□ -0.49
AC012339.1-201ENST00000505564 ITGB5P18084 799 aa11.96□□□□□ -0.49
AC012339.1-201ENST00000505564 PURAQ00577 322 aaKnown RBP11.96□□□□□ -0.49
AC012339.1-201ENST00000505564 SP2Q02086 613 aa11.96□□□□□ -0.49
AC012339.1-201ENST00000505564 TRIM60Q495X7 471 aa11.96□□□□□ -0.49
AC012339.1-201ENST00000505564 FAM47CQ5HY64 1035 aa11.96□□□□□ -0.49
AC012339.1-201ENST00000505564 PLA2G4DQ86XP0 818 aa11.96□□□□□ -0.49
AC012339.1-201ENST00000505564 RASGRP4Q8TDF6 673 aa11.96□□□□□ -0.49
AC012339.1-201ENST00000505564 LBHD1Q9BQE6 289 aaPredicted RBP11.96□□□□□ -0.49
AC012339.1-201ENST00000505564 PRDM5Q9NQX1 630 aaPredicted RBP11.96□□□□□ -0.49
AC012339.1-201ENST00000505564 KCNH7Q9NS40 1196 aa11.96□□□□□ -0.49
AC012339.1-201ENST00000505564 PKD2L1Q9P0L9 805 aa11.96□□□□□ -0.49
AC012339.1-201ENST00000505564 LAMA3Q16787 3333 aa11.96□□□□□ -0.5
AC012339.1-201ENST00000505564 MEIS1O00470 390 aa11.95□□□□□ -0.5
AC012339.1-201ENST00000505564 MARCH6O60337 910 aa11.95□□□□□ -0.5
AC012339.1-201ENST00000505564 SUPT20HL2P0C7V6 817 aa11.95□□□□□ -0.5
AC012339.1-201ENST00000505564 PTGS1P23219 599 aa11.95□□□□□ -0.5
AC012339.1-201ENST00000505564 SP4Q02446 784 aa11.95□□□□□ -0.5
AC012339.1-201ENST00000505564 TLE2Q04725 743 aa11.95□□□□□ -0.5
AC012339.1-201ENST00000505564 PRR16Q569H4 304 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms