RNA–Protein interactions for RNA: ENST00000505045.1

CDH9-203, Transcript of cadherin 9, humanhuman

TSL 1 (best)

Gene CDH9, Length 1,801 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-203ENST00000505045 TMEM132BQ14DG7 1078 aa5.79□□□□□ -1.48
CDH9-203ENST00000505045 SBK1Q52WX2 424 aa5.79□□□□□ -1.48
CDH9-203ENST00000505045 PRRT3Q5FWE3 981 aa5.79□□□□□ -1.48
CDH9-203ENST00000505045 FAM83BQ5T0W9 1011 aa5.79□□□□□ -1.48
CDH9-203ENST00000505045 B4GALNT3Q6L9W6 998 aa5.79□□□□□ -1.48
CDH9-203ENST00000505045 PSAPL1Q6NUJ1 521 aa5.79□□□□□ -1.48
CDH9-203ENST00000505045 PLEKHH3Q7Z736 793 aa5.79□□□□□ -1.48
CDH9-203ENST00000505045 ZNF589Q86UQ0 364 aaPredicted RBP5.79□□□□□ -1.48
CDH9-203ENST00000505045 ETFBKMTQ8IXQ9 262 aa5.79□□□□□ -1.48
CDH9-203ENST00000505045 TRPV1Q8NER1 839 aa5.79□□□□□ -1.48
CDH9-203ENST00000505045 TTC9Q92623 222 aa5.79□□□□□ -1.48
CDH9-203ENST00000505045 CHMP4CQ96CF2 233 aa5.79□□□□□ -1.48
CDH9-203ENST00000505045 FAM227BQ96M60 508 aa5.79□□□□□ -1.48
CDH9-203ENST00000505045 PNMA5Q96PV4 448 aa5.79□□□□□ -1.48
CDH9-203ENST00000505045 SPATC1LQ9H0A9 340 aa5.79□□□□□ -1.48
CDH9-203ENST00000505045 PLIN4Q96Q06 1357 aa5.79□□□□□ -1.48
CDH9-203ENST00000505045 RPTORQ8N122 1335 aa5.79□□□□□ -1.48
CDH9-203ENST00000505045 REV3LO60673 3130 aa5.79□□□□□ -1.48
CDH9-203ENST00000505045 WDR46O15213 610 aaKnown RBP5.78□□□□□ -1.48
CDH9-203ENST00000505045 NMT2O60551 498 aa5.78□□□□□ -1.48
CDH9-203ENST00000505045 NDUFB10O96000 172 aa5.78□□□□□ -1.48
CDH9-203ENST00000505045 ZFYP08048 801 aaPredicted RBP5.78□□□□□ -1.48
CDH9-203ENST00000505045 XRCC5P13010 732 aaKnown RBP5.78□□□□□ -1.48
CDH9-203ENST00000505045 TAL1P17542 331 aaPredicted RBP5.78□□□□□ -1.48
CDH9-203ENST00000505045 ERCC3P19447 782 aa5.78□□□□□ -1.48
CDH9-203ENST00000505045 ADORA2AP29274 412 aa5.78□□□□□ -1.48
CDH9-203ENST00000505045 CYP2C19P33261 490 aa5.78□□□□□ -1.48
CDH9-203ENST00000505045 IRX6P78412 446 aaPredicted RBP5.78□□□□□ -1.48
CDH9-203ENST00000505045 GPLD1P80108 840 aa5.78□□□□□ -1.48
CDH9-203ENST00000505045 FAM47AQ5JRC9 791 aa5.78□□□□□ -1.48
CDH9-203ENST00000505045 DHX32Q7L7V1 743 aaKnown RBP5.78□□□□□ -1.48
CDH9-203ENST00000505045 SMC5Q8IY18 1101 aa5.78□□□□□ -1.48
CDH9-203ENST00000505045 IFNL3Q8IZI9 196 aa5.78□□□□□ -1.48
CDH9-203ENST00000505045 LRRC47Q8N1G4 583 aaKnown RBP5.78□□□□□ -1.48
CDH9-203ENST00000505045 REPS2Q8NFH8 660 aa5.78□□□□□ -1.48
CDH9-203ENST00000505045 GTF3C2Q8WUA4 911 aaPredicted RBP5.78□□□□□ -1.48
CDH9-203ENST00000505045 LPAR1Q92633 364 aa5.78□□□□□ -1.48
CDH9-203ENST00000505045 CEP95Q96GE4 821 aa5.78□□□□□ -1.48
CDH9-203ENST00000505045 PAWRQ96IZ0 340 aaKnown RBP5.78□□□□□ -1.48
CDH9-203ENST00000505045 LPIN3Q9BQK8 851 aa5.78□□□□□ -1.48
CDH9-203ENST00000505045 IL25Q9H293 177 aa5.78□□□□□ -1.48
CDH9-203ENST00000505045 FRRS1LQ9P0K9 344 aa5.78□□□□□ -1.48
CDH9-203ENST00000505045 STAP2Q9UGK3 403 aa5.78□□□□□ -1.48
CDH9-203ENST00000505045 ZNF214Q9UL59 606 aaPredicted RBP5.78□□□□□ -1.48
CDH9-203ENST00000505045 USP20Q9Y2K6 914 aa5.78□□□□□ -1.48
CDH9-203ENST00000505045 GTF3C3Q9Y5Q9 886 aa5.78□□□□□ -1.48
CDH9-203ENST00000505045 CHD7Q9P2D1 2997 aa5.78□□□□□ -1.48
CDH9-203ENST00000505045 CHD9Q3L8U1 2897 aa5.78□□□□□ -1.48
CDH9-203ENST00000505045 A0A0A0MRY4 1105 aa5.78□□□□□ -1.48
CDH9-203ENST00000505045 ERC2O15083 957 aa5.78□□□□□ -1.48
CDH9-203ENST00000505045 HYAL3O43820 417 aaPredicted RBP5.78□□□□□ -1.48
CDH9-203ENST00000505045 SASH3O75995 380 aa5.78□□□□□ -1.48
CDH9-203ENST00000505045 TFRCP02786 760 aaKnown RBP5.78□□□□□ -1.48
CDH9-203ENST00000505045 APPP05067 770 aa5.78□□□□□ -1.48
CDH9-203ENST00000505045 HOXD8P13378 290 aaPredicted RBP5.78□□□□□ -1.48
CDH9-203ENST00000505045 RGS2P41220 211 aa5.78□□□□□ -1.48
CDH9-203ENST00000505045 GATA4P43694 442 aa5.78□□□□□ -1.48
CDH9-203ENST00000505045 PPARAQ07869 468 aa5.78□□□□□ -1.48
CDH9-203ENST00000505045 TBC1D8BQ0IIM8 1120 aa5.78□□□□□ -1.48
CDH9-203ENST00000505045 PLS1Q14651 629 aa5.78□□□□□ -1.48
CDH9-203ENST00000505045 COG2Q14746 738 aa5.78□□□□□ -1.48
CDH9-203ENST00000505045 HABP4Q5JVS0 413 aaKnown RBP5.78□□□□□ -1.48
CDH9-203ENST00000505045 NKAPLQ5M9Q1 402 aa5.78□□□□□ -1.48
CDH9-203ENST00000505045 C16orf46Q6P387 395 aa5.78□□□□□ -1.48
CDH9-203ENST00000505045 GIMAP6Q6P9H5 292 aa5.78□□□□□ -1.48
CDH9-203ENST00000505045 AMOTL1Q8IY63 956 aa5.78□□□□□ -1.48
CDH9-203ENST00000505045 GCC1Q96CN9 775 aa5.78□□□□□ -1.48
CDH9-203ENST00000505045 CCDC17Q96LX7 622 aa5.78□□□□□ -1.48
CDH9-203ENST00000505045 IGFLR1Q9H665 355 aa5.78□□□□□ -1.48
CDH9-203ENST00000505045 KANSL2Q9H9L4 492 aa5.78□□□□□ -1.48
CDH9-203ENST00000505045 JPH1Q9HDC5 661 aaPredicted RBP5.78□□□□□ -1.48
CDH9-203ENST00000505045 OGDHLQ9ULD0 1010 aa5.78□□□□□ -1.48
CDH9-203ENST00000505045 ADAMTS5Q9UNA0 930 aa5.78□□□□□ -1.48
CDH9-203ENST00000505045 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.78□□□□□ -1.48
CDH9-203ENST00000505045 PATL2C9JE40 543 aaKnown RBP5.77□□□□□ -1.49
CDH9-203ENST00000505045 VWA5AO00534 786 aa5.77□□□□□ -1.49
CDH9-203ENST00000505045 PGK2P07205 417 aa5.77□□□□□ -1.49
CDH9-203ENST00000505045 HOXC6P09630 235 aa5.77□□□□□ -1.49
CDH9-203ENST00000505045 CYBAP13498 195 aa5.77□□□□□ -1.49
CDH9-203ENST00000505045 FXR1P51114 621 aaKnown RBP eCLIP5.77□□□□□ -1.49
CDH9-203ENST00000505045 NRLP54845 237 aa5.77□□□□□ -1.49
CDH9-203ENST00000505045 CCNA1P78396 465 aa5.77□□□□□ -1.49
CDH9-203ENST00000505045 PLAURQ03405 335 aa5.77□□□□□ -1.49
CDH9-203ENST00000505045 NMIQ13287 307 aaPredicted RBP5.77□□□□□ -1.49
CDH9-203ENST00000505045 PCSK7Q16549 785 aa5.77□□□□□ -1.49
CDH9-203ENST00000505045 PERM1Q5SV97 790 aa5.77□□□□□ -1.49
CDH9-203ENST00000505045 ANO1Q5XXA6 986 aa5.77□□□□□ -1.49
CDH9-203ENST00000505045 KRT25Q7Z3Z0 450 aa5.77□□□□□ -1.49
CDH9-203ENST00000505045 CCAR1Q8IX12 1150 aaKnown RBP5.77□□□□□ -1.49
CDH9-203ENST00000505045 NUDT8Q8WV74 236 aa5.77□□□□□ -1.49
CDH9-203ENST00000505045 DPF3Q92784 378 aa5.77□□□□□ -1.49
CDH9-203ENST00000505045 LENG1Q96BZ8 264 aaPredicted RBP5.77□□□□□ -1.49
CDH9-203ENST00000505045 NAPBQ9H115 298 aa5.77□□□□□ -1.49
CDH9-203ENST00000505045 PRO3102Q9H379 93 aa5.77□□□□□ -1.49
CDH9-203ENST00000505045 MKNK2Q9HBH9 465 aa5.77□□□□□ -1.49
CDH9-203ENST00000505045 MTMR4Q9NYA4 1195 aa5.77□□□□□ -1.49
CDH9-203ENST00000505045 PPP1R9AQ9ULJ8 1098 aa5.77□□□□□ -1.49
CDH9-203ENST00000505045 RIPK3Q9Y572 518 aa5.77□□□□□ -1.49
CDH9-203ENST00000505045 SUPT16HQ9Y5B9 1047 aaKnown RBP5.77□□□□□ -1.49
CDH9-203ENST00000505045 MUC3AQ02505 3323 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms