RNA–Protein interactions for RNA: ENST00000505005.5

NR1I3-220, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 985 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-220ENST00000505005 FAAP100Q0VG06 881 aa11.15□□□□□ -0.62
NR1I3-220ENST00000505005 PTK7Q13308 1070 aa11.15□□□□□ -0.62
NR1I3-220ENST00000505005 MFSD10Q14728 455 aa11.15□□□□□ -0.62
NR1I3-220ENST00000505005 KIAA0753Q2KHM9 967 aa11.15□□□□□ -0.62
NR1I3-220ENST00000505005 NBPF20Q3BBV1 942 aa11.15□□□□□ -0.62
NR1I3-220ENST00000505005 PRR16Q569H4 304 aa11.15□□□□□ -0.62
NR1I3-220ENST00000505005 ODR4Q5SWX8 454 aa11.15□□□□□ -0.62
NR1I3-220ENST00000505005 MFSD5Q6N075 450 aa11.15□□□□□ -0.62
NR1I3-220ENST00000505005 TAF2Q6P1X5 1199 aa11.15□□□□□ -0.62
NR1I3-220ENST00000505005 CCDC83Q8IWF9 413 aa11.15□□□□□ -0.62
NR1I3-220ENST00000505005 NECAB1Q8N987 351 aa11.15□□□□□ -0.62
NR1I3-220ENST00000505005 FBXO18Q8NFZ0 1043 aa11.15□□□□□ -0.62
NR1I3-220ENST00000505005 COPS5Q92905 334 aa11.15□□□□□ -0.62
NR1I3-220ENST00000505005 LENG1Q96BZ8 264 aaPredicted RBP11.15□□□□□ -0.62
NR1I3-220ENST00000505005 INTS4Q96HW7 963 aaKnown RBP11.15□□□□□ -0.62
NR1I3-220ENST00000505005 LARP6Q9BRS8 491 aaKnown RBP11.15□□□□□ -0.62
NR1I3-220ENST00000505005 GTF2IRD1Q9UHL9 959 aa11.15□□□□□ -0.62
NR1I3-220ENST00000505005 SMC3Q9UQE7 1217 aa11.15□□□□□ -0.62
NR1I3-220ENST00000505005 PPME1Q9Y570 386 aa11.15□□□□□ -0.62
NR1I3-220ENST00000505005 PCDHA10Q9Y5I2 948 aa11.15□□□□□ -0.62
NR1I3-220ENST00000505005 SCN10AQ9Y5Y9 1956 aa11.15□□□□□ -0.62
NR1I3-220ENST00000505005 C17orf102A2RUQ5 167 aa11.14□□□□□ -0.63
NR1I3-220ENST00000505005 H3BQV1 296 aa11.14□□□□□ -0.63
NR1I3-220ENST00000505005 M0R2N6 131 aa11.14□□□□□ -0.63
NR1I3-220ENST00000505005 HBP1O60381 514 aa11.14□□□□□ -0.63
NR1I3-220ENST00000505005 GAS7O60861 476 aa11.14□□□□□ -0.63
NR1I3-220ENST00000505005 ATG7O95352 703 aa11.14□□□□□ -0.63
NR1I3-220ENST00000505005 CTDNEP1O95476 244 aa11.14□□□□□ -0.63
NR1I3-220ENST00000505005 LGALS2P05162 132 aa11.14□□□□□ -0.63
NR1I3-220ENST00000505005 ACTN1P12814 892 aa11.14□□□□□ -0.63
NR1I3-220ENST00000505005 STAT5BP51692 787 aa11.14□□□□□ -0.63
NR1I3-220ENST00000505005 SP2Q02086 613 aa11.14□□□□□ -0.63
NR1I3-220ENST00000505005 FPGSQ05932 587 aa11.14□□□□□ -0.63
NR1I3-220ENST00000505005 PTGISQ16647 500 aa11.14□□□□□ -0.63
NR1I3-220ENST00000505005 KRT40Q6A162 431 aa11.14□□□□□ -0.63
NR1I3-220ENST00000505005 PSRC1Q6PGN9 363 aaPredicted RBP11.14□□□□□ -0.63
NR1I3-220ENST00000505005 DIS3L2Q8IYB7 885 aaKnown RBP11.14□□□□□ -0.63
NR1I3-220ENST00000505005 AFAP1L1Q8TED9 768 aa11.14□□□□□ -0.63
NR1I3-220ENST00000505005 ATP6V0A1Q93050 837 aa11.14□□□□□ -0.63
NR1I3-220ENST00000505005 TMX3Q96JJ7 454 aa11.14□□□□□ -0.63
NR1I3-220ENST00000505005 JPH2Q9BR39 696 aaPredicted RBP11.14□□□□□ -0.63
NR1I3-220ENST00000505005 RAB34Q9BZG1 259 aa11.14□□□□□ -0.63
NR1I3-220ENST00000505005 UBE2OQ9C0C9 1292 aaKnown RBP11.14□□□□□ -0.63
NR1I3-220ENST00000505005 HIPK3Q9H422 1215 aa11.14□□□□□ -0.63
NR1I3-220ENST00000505005 PDLIM7Q9NR12 457 aa11.14□□□□□ -0.63
NR1I3-220ENST00000505005 NRBP2Q9NSY0 501 aa11.14□□□□□ -0.63
NR1I3-220ENST00000505005 TMEM260Q9NX78 707 aa11.14□□□□□ -0.63
NR1I3-220ENST00000505005 DDX25Q9UHL0 483 aaKnown RBP11.14□□□□□ -0.63
NR1I3-220ENST00000505005 SAMM50Q9Y512 469 aa11.14□□□□□ -0.63
NR1I3-220ENST00000505005 IGLV3-22A0A075B6J6 115 aa11.13□□□□□ -0.63
NR1I3-220ENST00000505005 LAD1O00515 517 aa11.13□□□□□ -0.63
NR1I3-220ENST00000505005 BACH1O14867 736 aa11.13□□□□□ -0.63
NR1I3-220ENST00000505005 CCNT1O60563 726 aaKnown RBP11.13□□□□□ -0.63
NR1I3-220ENST00000505005 LGR5O75473 907 aa11.13□□□□□ -0.63
NR1I3-220ENST00000505005 FDPSP14324 419 aaKnown RBP11.13□□□□□ -0.63
NR1I3-220ENST00000505005 ACTR2P61160 394 aa11.13□□□□□ -0.63
NR1I3-220ENST00000505005 RBL2Q08999 1139 aa11.13□□□□□ -0.63
NR1I3-220ENST00000505005 LETM2Q2VYF4 491 aa11.13□□□□□ -0.63
NR1I3-220ENST00000505005 LRCH2Q5VUJ6 765 aa11.13□□□□□ -0.63
NR1I3-220ENST00000505005 NME8Q8N427 588 aa11.13□□□□□ -0.63
NR1I3-220ENST00000505005 SNX21Q969T3 373 aa11.13□□□□□ -0.63
NR1I3-220ENST00000505005 MBOAT7Q96N66 472 aa11.13□□□□□ -0.63
NR1I3-220ENST00000505005 GDF15Q99988 308 aa11.13□□□□□ -0.63
NR1I3-220ENST00000505005 C16orf70Q9BSU1 422 aa11.13□□□□□ -0.63
NR1I3-220ENST00000505005 TBX21Q9UL17 535 aa11.13□□□□□ -0.63
NR1I3-220ENST00000505005 KCNJ14Q9UNX9 436 aa11.13□□□□□ -0.63
NR1I3-220ENST00000505005 COL1A2P08123 1366 aa11.13□□□□□ -0.63
NR1I3-220ENST00000505005 FAM86B1E9PN63 330 aa11.12□□□□□ -0.63
NR1I3-220ENST00000505005 M0QZ92 97 aa11.12□□□□□ -0.63
NR1I3-220ENST00000505005 MAGEB2O15479 319 aa11.12□□□□□ -0.63
NR1I3-220ENST00000505005 ATP9AO75110 1047 aa11.12□□□□□ -0.63
NR1I3-220ENST00000505005 BMP15O95972 392 aa11.12□□□□□ -0.63
NR1I3-220ENST00000505005 FAM86B2P0C5J1 330 aa11.12□□□□□ -0.63
NR1I3-220ENST00000505005 ARP10275 920 aa11.12□□□□□ -0.63
NR1I3-220ENST00000505005 TMOD1P28289 359 aa11.12□□□□□ -0.63
NR1I3-220ENST00000505005 SEMA3FQ13275 785 aa11.12□□□□□ -0.63
NR1I3-220ENST00000505005 RILPL1Q5EBL4 403 aa11.12□□□□□ -0.63
NR1I3-220ENST00000505005 ZNF484Q5JVG2 852 aa11.12□□□□□ -0.63
NR1I3-220ENST00000505005 GPR153Q6NV75 609 aa11.12□□□□□ -0.63
NR1I3-220ENST00000505005 PIK3AP1Q6ZUJ8 805 aa11.12□□□□□ -0.63
NR1I3-220ENST00000505005 RPAINQ86UA6 219 aa11.12□□□□□ -0.63
NR1I3-220ENST00000505005 HSCBQ8IWL3 235 aa11.12□□□□□ -0.63
NR1I3-220ENST00000505005 TDHQ8IZJ6 230 aa11.12□□□□□ -0.63
NR1I3-220ENST00000505005 KCTD17Q8N5Z5 321 aa11.12□□□□□ -0.63
NR1I3-220ENST00000505005 NEK9Q8TD19 979 aa11.12□□□□□ -0.63
NR1I3-220ENST00000505005 BBXQ8WY36 941 aaPredicted RBP11.12□□□□□ -0.63
NR1I3-220ENST00000505005 SLC5A5Q92911 643 aa11.12□□□□□ -0.63
NR1I3-220ENST00000505005 ZNF302Q9NR11 478 aa11.12□□□□□ -0.63
NR1I3-220ENST00000505005 ZMYND8Q9ULU4 1186 aaPredicted RBP11.12□□□□□ -0.63
NR1I3-220ENST00000505005 IGKV6D-21A0A0A0MT36 114 aa11.11□□□□□ -0.63
NR1I3-220ENST00000505005 GSTTP1A0A1W2PQM5 241 aa11.11□□□□□ -0.63
NR1I3-220ENST00000505005 B4GALT4O60513 344 aa11.11□□□□□ -0.63
NR1I3-220ENST00000505005 HSP90AA1P07900 732 aaKnown RBP11.11□□□□□ -0.63
NR1I3-220ENST00000505005 MAGEA10P43363 369 aaPredicted RBP11.11□□□□□ -0.63
NR1I3-220ENST00000505005 INF2Q27J81 1249 aa11.11□□□□□ -0.63
NR1I3-220ENST00000505005 TMEM266Q2M3C6 531 aa11.11□□□□□ -0.63
NR1I3-220ENST00000505005 UTP14CQ5TAP6 766 aaKnown RBP11.11□□□□□ -0.63
NR1I3-220ENST00000505005 IER5Q5VY09 327 aa11.11□□□□□ -0.63
NR1I3-220ENST00000505005 LARP1BQ659C4 914 aaKnown RBP11.11□□□□□ -0.63
NR1I3-220ENST00000505005 PDXDC2PQ6P474 469 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms