RNA–Protein interactions for RNA: ENST00000504884.6

SNCAIP-207, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 1,885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-207ENST00000504884 RGL1Q9NZL6 768 aa17.08■□□□□ 0.33
SNCAIP-207ENST00000504884 CNOT7Q9UIV1 285 aaKnown RBP17.08■□□□□ 0.33
SNCAIP-207ENST00000504884 SCAF8Q9UPN6 1271 aaKnown RBP17.08■□□□□ 0.33
SNCAIP-207ENST00000504884 BCS1LQ9Y276 419 aa17.08■□□□□ 0.33
SNCAIP-207ENST00000504884 GAS7O60861 476 aa17.07■□□□□ 0.32
SNCAIP-207ENST00000504884 SLITRK3O94933 977 aa17.07■□□□□ 0.32
SNCAIP-207ENST00000504884 GMPSP49915 693 aaPredicted RBP17.07■□□□□ 0.32
SNCAIP-207ENST00000504884 PRELPP51888 382 aa17.07■□□□□ 0.32
SNCAIP-207ENST00000504884 MARSP56192 900 aaKnown RBP17.07■□□□□ 0.32
SNCAIP-207ENST00000504884 CCDC40Q4G0X9 1142 aa17.07■□□□□ 0.32
SNCAIP-207ENST00000504884 NELFCDQ8IXH7 590 aa17.07■□□□□ 0.32
SNCAIP-207ENST00000504884 REEP2Q9BRK0 252 aa17.07■□□□□ 0.32
SNCAIP-207ENST00000504884 FGFBP2Q9BYJ0 223 aa17.07■□□□□ 0.32
SNCAIP-207ENST00000504884 EDEM3Q9BZQ6 932 aa17.07■□□□□ 0.32
SNCAIP-207ENST00000504884 BHMT2Q9H2M3 363 aa17.07■□□□□ 0.32
SNCAIP-207ENST00000504884 MAP3K20Q9NYL2 800 aaKnown RBP17.07■□□□□ 0.32
SNCAIP-207ENST00000504884 ZNF536O15090 1300 aa17.07■□□□□ 0.32
SNCAIP-207ENST00000504884 A0A0U1RQJ8 604 aa17.07■□□□□ 0.32
SNCAIP-207ENST00000504884 FZD9O00144 591 aa17.07■□□□□ 0.32
SNCAIP-207ENST00000504884 HNRNPH3P31942 346 aaKnown RBP17.07■□□□□ 0.32
SNCAIP-207ENST00000504884 ZNF569Q5MCW4 686 aa17.07■□□□□ 0.32
SNCAIP-207ENST00000504884 ZC3H3Q8IXZ2 948 aaKnown RBP17.07■□□□□ 0.32
SNCAIP-207ENST00000504884 SAMD3Q8N6K7 520 aa17.07■□□□□ 0.32
SNCAIP-207ENST00000504884 ATRIPQ8WXE1 791 aa17.07■□□□□ 0.32
SNCAIP-207ENST00000504884 ZNF577Q9BSK1 485 aa17.07■□□□□ 0.32
SNCAIP-207ENST00000504884 MMRN2Q9H8L6 949 aa17.07■□□□□ 0.32
SNCAIP-207ENST00000504884 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.07■□□□□ 0.32
SNCAIP-207ENST00000504884 PNMA2Q9UL42 364 aa17.07■□□□□ 0.32
SNCAIP-207ENST00000504884 MRFAP1Q9Y605 127 aa17.07■□□□□ 0.32
SNCAIP-207ENST00000504884 V9GYY5 206 aaPredicted RBP17.07■□□□□ 0.32
SNCAIP-207ENST00000504884 EFCAB8A8MWE9 144 aa17.06■□□□□ 0.32
SNCAIP-207ENST00000504884 CETN3O15182 167 aa17.06■□□□□ 0.32
SNCAIP-207ENST00000504884 ARHGAP25P42331 645 aa17.06■□□□□ 0.32
SNCAIP-207ENST00000504884 UBXN2AP68543 259 aa17.06■□□□□ 0.32
SNCAIP-207ENST00000504884 GHRHRQ02643 423 aa17.06■□□□□ 0.32
SNCAIP-207ENST00000504884 ADAM9Q13443 819 aa17.06■□□□□ 0.32
SNCAIP-207ENST00000504884 ELF2Q15723 593 aa17.06■□□□□ 0.32
SNCAIP-207ENST00000504884 ZNF662Q6ZS27 426 aa17.06■□□□□ 0.32
SNCAIP-207ENST00000504884 ARHGAP27Q6ZUM4 889 aa17.06■□□□□ 0.32
SNCAIP-207ENST00000504884 SAMD7Q7Z3H4 446 aa17.06■□□□□ 0.32
SNCAIP-207ENST00000504884 TPH2Q8IWU9 490 aa17.06■□□□□ 0.32
SNCAIP-207ENST00000504884 UBXN4Q92575 508 aa17.06■□□□□ 0.32
SNCAIP-207ENST00000504884 DYDC2Q96IM9 177 aa17.06■□□□□ 0.32
SNCAIP-207ENST00000504884 MXRA8Q9BRK3 442 aa17.06■□□□□ 0.32
SNCAIP-207ENST00000504884 CARD6Q9BX69 1037 aa17.06■□□□□ 0.32
SNCAIP-207ENST00000504884 HAUS4Q9H6D7 363 aa17.06■□□□□ 0.32
SNCAIP-207ENST00000504884 NHEJ1Q9H9Q4 299 aaPredicted RBP17.06■□□□□ 0.32
SNCAIP-207ENST00000504884 HACL1Q9UJ83 578 aa17.06■□□□□ 0.32
SNCAIP-207ENST00000504884 PLAGL2Q9UPG8 496 aa17.06■□□□□ 0.32
SNCAIP-207ENST00000504884 TRAF3IP3Q9Y228 551 aa17.06■□□□□ 0.32
SNCAIP-207ENST00000504884 IPO7O95373 1038 aaKnown RBP17.05■□□□□ 0.32
SNCAIP-207ENST00000504884 ARP10275 920 aa17.05■□□□□ 0.32
SNCAIP-207ENST00000504884 GAP43P17677 238 aa17.05■□□□□ 0.32
SNCAIP-207ENST00000504884 CTTNQ14247 550 aaKnown RBP17.05■□□□□ 0.32
SNCAIP-207ENST00000504884 EPHA7Q15375 998 aa17.05■□□□□ 0.32
SNCAIP-207ENST00000504884 KNOP1Q1ED39 458 aaKnown RBP17.05■□□□□ 0.32
SNCAIP-207ENST00000504884 ERCC6LQ2NKX8 1250 aa17.05■□□□□ 0.32
SNCAIP-207ENST00000504884 DCAF15Q66K64 600 aa17.05■□□□□ 0.32
SNCAIP-207ENST00000504884 RINT1Q6NUQ1 792 aa17.05■□□□□ 0.32
SNCAIP-207ENST00000504884 EPM2AIP1Q7L775 607 aaPredicted RBP17.05■□□□□ 0.32
SNCAIP-207ENST00000504884 FBXO41Q8TF61 875 aa17.05■□□□□ 0.32
SNCAIP-207ENST00000504884 HOOK2Q96ED9 719 aa17.05■□□□□ 0.32
SNCAIP-207ENST00000504884 NACC1Q96RE7 527 aa17.05■□□□□ 0.32
SNCAIP-207ENST00000504884 RIT2Q99578 217 aa17.05■□□□□ 0.32
SNCAIP-207ENST00000504884 TEKT3Q9BXF9 490 aa17.05■□□□□ 0.32
SNCAIP-207ENST00000504884 TANGO6Q9C0B7 1094 aa17.05■□□□□ 0.32
SNCAIP-207ENST00000504884 SLC38A10Q9HBR0 1119 aa17.05■□□□□ 0.32
SNCAIP-207ENST00000504884 FAM184BQ9ULE4 1060 aa17.05■□□□□ 0.32
SNCAIP-207ENST00000504884 REXO2Q9Y3B8 237 aaKnown RBP17.05■□□□□ 0.32
SNCAIP-207ENST00000504884 GJA3Q9Y6H8 435 aa17.05■□□□□ 0.32
SNCAIP-207ENST00000504884 BRCA1P38398 1863 aaKnown RBP17.05■□□□□ 0.32
SNCAIP-207ENST00000504884 CTAGE9A4FU28 777 aa17.05■□□□□ 0.32
SNCAIP-207ENST00000504884 EIF3CLB5ME19 914 aaKnown RBP17.05■□□□□ 0.32
SNCAIP-207ENST00000504884 TBCAO75347 108 aaKnown RBP17.05■□□□□ 0.32
SNCAIP-207ENST00000504884 BCRP11274 1271 aa17.05■□□□□ 0.32
SNCAIP-207ENST00000504884 USP14P54578 494 aa17.05■□□□□ 0.32
SNCAIP-207ENST00000504884 TBC1D10BQ4KMP7 808 aaPredicted RBP17.05■□□□□ 0.32
SNCAIP-207ENST00000504884 SFR1Q86XK3 245 aa17.05■□□□□ 0.32
SNCAIP-207ENST00000504884 TRIM59Q8IWR1 403 aa17.05■□□□□ 0.32
SNCAIP-207ENST00000504884 NEK11Q8NG66 645 aa17.05■□□□□ 0.32
SNCAIP-207ENST00000504884 CLEC4DQ8WXI8 215 aa17.05■□□□□ 0.32
SNCAIP-207ENST00000504884 EIF3CQ99613 913 aaKnown RBP17.05■□□□□ 0.32
SNCAIP-207ENST00000504884 FAM207AQ9NSI2 230 aaPredicted RBP17.05■□□□□ 0.32
SNCAIP-207ENST00000504884 IPO5O00410 1097 aaKnown RBP17.04■□□□□ 0.32
SNCAIP-207ENST00000504884 PDXKO00764 312 aa17.04■□□□□ 0.32
SNCAIP-207ENST00000504884 CHMP2AO43633 222 aa17.04■□□□□ 0.32
SNCAIP-207ENST00000504884 CALUO43852 315 aaPredicted RBP17.04■□□□□ 0.32
SNCAIP-207ENST00000504884 FDX1P10109 184 aa17.04■□□□□ 0.32
SNCAIP-207ENST00000504884 BMT2Q1RMZ1 405 aa17.04■□□□□ 0.32
SNCAIP-207ENST00000504884 B3GNT9Q6UX72 402 aa17.04■□□□□ 0.32
SNCAIP-207ENST00000504884 NIPA1Q7RTP0 329 aa17.04■□□□□ 0.32
SNCAIP-207ENST00000504884 LRRN4CLQ8ND94 238 aa17.04■□□□□ 0.32
SNCAIP-207ENST00000504884 RUSC1Q9BVN2 902 aa17.04■□□□□ 0.32
SNCAIP-207ENST00000504884 CCDC94Q9BW85 323 aaPredicted RBP17.04■□□□□ 0.32
SNCAIP-207ENST00000504884 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.04■□□□□ 0.32
SNCAIP-207ENST00000504884 RPTORQ8N122 1335 aa17.04■□□□□ 0.32
SNCAIP-207ENST00000504884 ATAD5Q96QE3 1844 aa17.04■□□□□ 0.32
SNCAIP-207ENST00000504884 TADA3O75528 432 aa17.03■□□□□ 0.32
SNCAIP-207ENST00000504884 C1orf186Q6ZWK4 172 aa17.03■□□□□ 0.32
SNCAIP-207ENST00000504884 CPXCR1Q8N123 301 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms