RNA–Protein interactions for RNA: ENST00000504554.1

RFC1-207, Transcript of replication factor C subunit 1, humanhuman

TSL 4

Gene RFC1, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-207ENST00000504554 CFHP08603 1231 aa9.21□□□□□ -0.94
RFC1-207ENST00000504554 UBA1P22314 1058 aaKnown RBP9.21□□□□□ -0.94
RFC1-207ENST00000504554 PDIA3P30101 505 aaKnown RBP9.21□□□□□ -0.94
RFC1-207ENST00000504554 CCND2P30279 289 aa9.21□□□□□ -0.94
RFC1-207ENST00000504554 CPT1AP50416 773 aa9.21□□□□□ -0.94
RFC1-207ENST00000504554 METAP2P50579 478 aaKnown RBP eCLIP9.21□□□□□ -0.94
RFC1-207ENST00000504554 EVCP57679 992 aa9.21□□□□□ -0.94
RFC1-207ENST00000504554 SHHQ15465 462 aa9.21□□□□□ -0.94
RFC1-207ENST00000504554 NTRK3Q16288 839 aa9.21□□□□□ -0.94
RFC1-207ENST00000504554 PKN1Q16512 942 aa9.21□□□□□ -0.94
RFC1-207ENST00000504554 NBPF20Q3BBV1 942 aa9.21□□□□□ -0.94
RFC1-207ENST00000504554 RUFY3Q7L099 469 aa9.21□□□□□ -0.94
RFC1-207ENST00000504554 C16orf59Q7L2K0 433 aa9.21□□□□□ -0.94
RFC1-207ENST00000504554 TDHQ8IZJ6 230 aa9.21□□□□□ -0.94
RFC1-207ENST00000504554 VWCEQ96DN2 955 aa9.21□□□□□ -0.94
RFC1-207ENST00000504554 PGBD1Q96JS3 809 aa9.21□□□□□ -0.94
RFC1-207ENST00000504554 CTAGE1Q96RT6 745 aa9.21□□□□□ -0.94
RFC1-207ENST00000504554 MPHOSPH6Q99547 160 aaKnown RBP9.21□□□□□ -0.94
RFC1-207ENST00000504554 MTG1Q9BT17 334 aaPredicted RBP9.21□□□□□ -0.94
RFC1-207ENST00000504554 PSTPIP2Q9H939 334 aa9.21□□□□□ -0.94
RFC1-207ENST00000504554 NCOA5Q9HCD5 579 aaKnown RBP9.21□□□□□ -0.94
RFC1-207ENST00000504554 TRMT13Q9NUP7 481 aaKnown RBP9.21□□□□□ -0.94
RFC1-207ENST00000504554 PRKAG2Q9UGJ0 569 aa9.21□□□□□ -0.94
RFC1-207ENST00000504554 NAP1L2Q9ULW6 460 aaPredicted RBP9.21□□□□□ -0.94
RFC1-207ENST00000504554 MRVI1Q9Y6F6 885 aa9.21□□□□□ -0.94
RFC1-207ENST00000504554 TRIOBPQ9H2D6 2365 aa9.21□□□□□ -0.94
RFC1-207ENST00000504554 SPTBN5Q9NRC6 3674 aaKnown RBP9.2□□□□□ -0.94
RFC1-207ENST00000504554 LAMA2P24043 3122 aaKnown RBP9.2□□□□□ -0.94
RFC1-207ENST00000504554 A0A1W2PPC1 479 aa9.2□□□□□ -0.94
RFC1-207ENST00000504554 B4DLN1 442 aa9.2□□□□□ -0.94
RFC1-207ENST00000504554 GGPS1O95749 300 aa9.2□□□□□ -0.94
RFC1-207ENST00000504554 TIMP1P01033 207 aa9.2□□□□□ -0.94
RFC1-207ENST00000504554 PSMA5P28066 241 aa9.2□□□□□ -0.94
RFC1-207ENST00000504554 CYP2C18P33260 490 aa9.2□□□□□ -0.94
RFC1-207ENST00000504554 MRPL12P52815 198 aaKnown RBP9.2□□□□□ -0.94
RFC1-207ENST00000504554 RCAN1P53805 252 aa9.2□□□□□ -0.94
RFC1-207ENST00000504554 CCT2P78371 535 aaKnown RBP9.2□□□□□ -0.94
RFC1-207ENST00000504554 TRAF1Q13077 416 aa9.2□□□□□ -0.94
RFC1-207ENST00000504554 HSDL1Q3SXM5 330 aa9.2□□□□□ -0.94
RFC1-207ENST00000504554 CELF3Q5SZQ8 465 aaKnown RBP9.2□□□□□ -0.94
RFC1-207ENST00000504554 SMARCC2Q8TAQ2 1214 aa9.2□□□□□ -0.94
RFC1-207ENST00000504554 PHKBQ93100 1093 aa9.2□□□□□ -0.94
RFC1-207ENST00000504554 INPP4AQ96PE3 977 aaPredicted RBP9.2□□□□□ -0.94
RFC1-207ENST00000504554 PPP1R12CQ9BZL4 782 aa9.2□□□□□ -0.94
RFC1-207ENST00000504554 TM6SF1Q9BZW5 370 aa9.2□□□□□ -0.94
RFC1-207ENST00000504554 ALDH8A1Q9H2A2 487 aaPredicted RBP9.2□□□□□ -0.94
RFC1-207ENST00000504554 POLR3EQ9NVU0 708 aa9.2□□□□□ -0.94
RFC1-207ENST00000504554 TMEM260Q9NX78 707 aa9.2□□□□□ -0.94
RFC1-207ENST00000504554 PCDHA6Q9UN73 950 aa9.2□□□□□ -0.94
RFC1-207ENST00000504554 PCDHA8Q9Y5H6 950 aa9.2□□□□□ -0.94
RFC1-207ENST00000504554 SPATA31C2B4DYI2 1134 aa9.19□□□□□ -0.94
RFC1-207ENST00000504554 ATP9AO75110 1047 aa9.19□□□□□ -0.94
RFC1-207ENST00000504554 ZNF286BP0CG31 522 aa9.19□□□□□ -0.94
RFC1-207ENST00000504554 CYP2C9P11712 490 aa9.19□□□□□ -0.94
RFC1-207ENST00000504554 HOXD8P13378 290 aaPredicted RBP9.19□□□□□ -0.94
RFC1-207ENST00000504554 RAG1P15918 1043 aa9.19□□□□□ -0.94
RFC1-207ENST00000504554 ITGB5P18084 799 aa9.19□□□□□ -0.94
RFC1-207ENST00000504554 ICAM3P32942 547 aa9.19□□□□□ -0.94
RFC1-207ENST00000504554 CLK2P49760 499 aaKnown RBP9.19□□□□□ -0.94
RFC1-207ENST00000504554 FGD1P98174 961 aa9.19□□□□□ -0.94
RFC1-207ENST00000504554 PFKFB3Q16875 520 aaPredicted RBP9.19□□□□□ -0.94
RFC1-207ENST00000504554 LRIT3Q3SXY7 679 aa9.19□□□□□ -0.94
RFC1-207ENST00000504554 KMT5BQ4FZB7 885 aa9.19□□□□□ -0.94
RFC1-207ENST00000504554 PCNX4Q63HM2 1172 aa9.19□□□□□ -0.94
RFC1-207ENST00000504554 DHX37Q8IY37 1157 aaKnown RBP9.19□□□□□ -0.94
RFC1-207ENST00000504554 PPTC7Q8NI37 304 aa9.19□□□□□ -0.94
RFC1-207ENST00000504554 CYP2W1Q8TAV3 490 aa9.19□□□□□ -0.94
RFC1-207ENST00000504554 SPIRE2Q8WWL2 714 aa9.19□□□□□ -0.94
RFC1-207ENST00000504554 LBHD1Q9BQE6 289 aaPredicted RBP9.19□□□□□ -0.94
RFC1-207ENST00000504554 WNT8AQ9H1J5 351 aa9.19□□□□□ -0.94
RFC1-207ENST00000504554 RIC8AQ9NPQ8 531 aa9.19□□□□□ -0.94
RFC1-207ENST00000504554 BARHL2Q9NY43 387 aa9.19□□□□□ -0.94
RFC1-207ENST00000504554 CYP46A1Q9Y6A2 500 aa9.19□□□□□ -0.94
RFC1-207ENST00000504554 MROH7Q68CQ1 1323 aa9.19□□□□□ -0.94
RFC1-207ENST00000504554 SMCO2A6NFE2 343 aa9.18□□□□□ -0.94
RFC1-207ENST00000504554 HAS3O00219 553 aa9.18□□□□□ -0.94
RFC1-207ENST00000504554 PRPF3O43395 683 aaKnown RBP9.18□□□□□ -0.94
RFC1-207ENST00000504554 EDIL3O43854 480 aa9.18□□□□□ -0.94
RFC1-207ENST00000504554 ACRP10323 421 aa9.18□□□□□ -0.94
RFC1-207ENST00000504554 SCG2P13521 617 aa9.18□□□□□ -0.94
RFC1-207ENST00000504554 MYH6P13533 1939 aa9.18□□□□□ -0.94
RFC1-207ENST00000504554 CSF2RAP15509 400 aa9.18□□□□□ -0.94
RFC1-207ENST00000504554 NAPAP54920 295 aa9.18□□□□□ -0.94
RFC1-207ENST00000504554 CCL23P55773 120 aa9.18□□□□□ -0.94
RFC1-207ENST00000504554 CHMP4BP1P59074 171 aa9.18□□□□□ -0.94
RFC1-207ENST00000504554 ZNF200P98182 395 aaPredicted RBP9.18□□□□□ -0.94
RFC1-207ENST00000504554 STK3Q13188 491 aa9.18□□□□□ -0.94
RFC1-207ENST00000504554 LAMC2Q13753 1193 aa9.18□□□□□ -0.94
RFC1-207ENST00000504554 PPP2R2DQ66LE6 453 aa9.18□□□□□ -0.94
RFC1-207ENST00000504554 GDF6Q6KF10 455 aaPredicted RBP9.18□□□□□ -0.94
RFC1-207ENST00000504554 MFSD5Q6N075 450 aa9.18□□□□□ -0.94
RFC1-207ENST00000504554 TRIM67Q6ZTA4 783 aa9.18□□□□□ -0.94
RFC1-207ENST00000504554 CYFIP1Q7L576 1253 aa9.18□□□□□ -0.94
RFC1-207ENST00000504554 DHX38Q92620 1227 aaKnown RBP9.18□□□□□ -0.94
RFC1-207ENST00000504554 CUL5Q93034 780 aa9.18□□□□□ -0.94
RFC1-207ENST00000504554 IL17RAQ96F46 866 aa9.18□□□□□ -0.94
RFC1-207ENST00000504554 SPATA33Q96N06 139 aa9.18□□□□□ -0.94
RFC1-207ENST00000504554 C16orf70Q9BSU1 422 aa9.18□□□□□ -0.94
RFC1-207ENST00000504554 NOC4LQ9BVI4 516 aaKnown RBP9.18□□□□□ -0.94
RFC1-207ENST00000504554 PDRG1Q9NUG6 133 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms