RNA–Protein interactions for RNA: ENST00000504526.1

TRAPPC11-203, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-203ENST00000504526 RASGRP4Q8TDF6 673 aa24.09■■□□□ 1.45
TRAPPC11-203ENST00000504526 HERVK_113Q902F9 699 aa24.09■■□□□ 1.45
TRAPPC11-203ENST00000504526 WASF1Q92558 559 aa24.09■■□□□ 1.45
TRAPPC11-203ENST00000504526 SMARCAD1Q9H4L7 1026 aa24.09■■□□□ 1.45
TRAPPC11-203ENST00000504526 ERAP1Q9NZ08 941 aa24.09■■□□□ 1.45
TRAPPC11-203ENST00000504526 TELO2Q9Y4R8 837 aa24.09■■□□□ 1.45
TRAPPC11-203ENST00000504526 EMSYQ7Z589 1322 aa24.09■■□□□ 1.45
TRAPPC11-203ENST00000504526 IGLV3-22A0A075B6J6 115 aa24.08■■□□□ 1.45
TRAPPC11-203ENST00000504526 HSFX4A0A1B0GTS1 333 aaPredicted RBP24.08■■□□□ 1.45
TRAPPC11-203ENST00000504526 HSFX3A0A1B0GWH4 333 aaPredicted RBP24.08■■□□□ 1.45
TRAPPC11-203ENST00000504526 USP11P51784 963 aa24.08■■□□□ 1.45
TRAPPC11-203ENST00000504526 ITGB3BPQ13352 177 aaPredicted RBP24.08■■□□□ 1.45
TRAPPC11-203ENST00000504526 ME3Q16798 604 aa24.08■■□□□ 1.45
TRAPPC11-203ENST00000504526 FAM109BQ6ICB4 259 aaPredicted RBP24.08■■□□□ 1.45
TRAPPC11-203ENST00000504526 BLIDQ8IZY5 108 aa24.08■■□□□ 1.45
TRAPPC11-203ENST00000504526 DHX38Q92620 1227 aaKnown RBP24.08■■□□□ 1.45
TRAPPC11-203ENST00000504526 ATP6V0A1Q93050 837 aa24.08■■□□□ 1.45
TRAPPC11-203ENST00000504526 GTF3C6Q969F1 213 aa24.08■■□□□ 1.45
TRAPPC11-203ENST00000504526 DOCK5Q9H7D0 1870 aa24.08■■□□□ 1.45
TRAPPC11-203ENST00000504526 SELPP16109 830 aa24.07■■□□□ 1.44
TRAPPC11-203ENST00000504526 LRRC8DQ7L1W4 858 aa24.07■■□□□ 1.44
TRAPPC11-203ENST00000504526 SERINC5Q86VE9 423 aa24.07■■□□□ 1.44
TRAPPC11-203ENST00000504526 GLG1Q92896 1179 aa24.07■■□□□ 1.44
TRAPPC11-203ENST00000504526 TNPO1Q92973 898 aaKnown RBP24.07■■□□□ 1.44
TRAPPC11-203ENST00000504526 RNPEPQ9H4A4 650 aa24.07■■□□□ 1.44
TRAPPC11-203ENST00000504526 AZI2Q9H6S1 392 aa24.07■■□□□ 1.44
TRAPPC11-203ENST00000504526 ORC3Q9UBD5 711 aaPredicted RBP24.07■■□□□ 1.44
TRAPPC11-203ENST00000504526 IPO5O00410 1097 aaKnown RBP24.06■■□□□ 1.44
TRAPPC11-203ENST00000504526 LGR5O75473 907 aa24.06■■□□□ 1.44
TRAPPC11-203ENST00000504526 CKBP12277 381 aa24.06■■□□□ 1.44
TRAPPC11-203ENST00000504526 ACTN1P12814 892 aa24.06■■□□□ 1.44
TRAPPC11-203ENST00000504526 ACTR2P61160 394 aa24.06■■□□□ 1.44
TRAPPC11-203ENST00000504526 ZNF200P98182 395 aaPredicted RBP24.06■■□□□ 1.44
TRAPPC11-203ENST00000504526 AIFM3Q96NN9 605 aa24.06■■□□□ 1.44
TRAPPC11-203ENST00000504526 ZNF577Q9BSK1 485 aa24.06■■□□□ 1.44
TRAPPC11-203ENST00000504526 TBC1D22BQ9NU19 505 aa24.06■■□□□ 1.44
TRAPPC11-203ENST00000504526 NRCAMQ92823 1304 aa24.06■■□□□ 1.44
TRAPPC11-203ENST00000504526 M0R2N6 131 aa24.05■■□□□ 1.44
TRAPPC11-203ENST00000504526 CTDNEP1O95476 244 aa24.05■■□□□ 1.44
TRAPPC11-203ENST00000504526 HIC1Q14526 733 aa24.05■■□□□ 1.44
TRAPPC11-203ENST00000504526 TRIM71Q2Q1W2 868 aaKnown RBP24.05■■□□□ 1.44
TRAPPC11-203ENST00000504526 DEFB128Q7Z7B8 93 aa24.05■■□□□ 1.44
TRAPPC11-203ENST00000504526 NECAB1Q8N987 351 aa24.05■■□□□ 1.44
TRAPPC11-203ENST00000504526 PHF20Q9BVI0 1012 aa24.05■■□□□ 1.44
TRAPPC11-203ENST00000504526 TCEAL9Q9UHQ7 104 aa24.05■■□□□ 1.44
TRAPPC11-203ENST00000504526 CAND2O75155 1236 aa24.04■■□□□ 1.44
TRAPPC11-203ENST00000504526 ATG7O95352 703 aa24.04■■□□□ 1.44
TRAPPC11-203ENST00000504526 LARGE1O95461 756 aa24.04■■□□□ 1.44
TRAPPC11-203ENST00000504526 RBM25P49756 843 aaKnown RBP24.04■■□□□ 1.44
TRAPPC11-203ENST00000504526 NPY5RQ15761 445 aa24.04■■□□□ 1.44
TRAPPC11-203ENST00000504526 PRR16Q569H4 304 aa24.04■■□□□ 1.44
TRAPPC11-203ENST00000504526 OTOP2Q7RTS6 562 aa24.04■■□□□ 1.44
TRAPPC11-203ENST00000504526 PLPPR4Q7Z2D5 763 aa24.04■■□□□ 1.44
TRAPPC11-203ENST00000504526 KRT25Q7Z3Z0 450 aa24.04■■□□□ 1.44
TRAPPC11-203ENST00000504526 DEFB123Q8N688 67 aa24.04■■□□□ 1.44
TRAPPC11-203ENST00000504526 TBCKQ8TEA7 893 aa24.04■■□□□ 1.44
TRAPPC11-203ENST00000504526 VWCEQ96DN2 955 aa24.04■■□□□ 1.44
TRAPPC11-203ENST00000504526 SETD4Q9NVD3 440 aa24.04■■□□□ 1.44
TRAPPC11-203ENST00000504526 LIMCH1Q9UPQ0 1083 aa24.04■■□□□ 1.44
TRAPPC11-203ENST00000504526 TANC1Q9C0D5 1861 aa24.04■■□□□ 1.44
TRAPPC11-203ENST00000504526 TREHO43280 583 aa24.03■■□□□ 1.44
TRAPPC11-203ENST00000504526 SLC26A2P50443 739 aa24.03■■□□□ 1.44
TRAPPC11-203ENST00000504526 NONOQ15233 471 aaKnown RBP eCLIP24.03■■□□□ 1.44
TRAPPC11-203ENST00000504526 ZNF697Q5TEC3 545 aa24.03■■□□□ 1.44
TRAPPC11-203ENST00000504526 FTOQ9C0B1 505 aaKnown RBP eCLIP24.03■■□□□ 1.44
TRAPPC11-203ENST00000504526 UPF2Q9HAU5 1272 aaKnown RBP24.03■■□□□ 1.44
TRAPPC11-203ENST00000504526 TMEM265A0A087WTH1 108 aa24.02■■□□□ 1.44
TRAPPC11-203ENST00000504526 DHX15O43143 795 aaKnown RBP24.02■■□□□ 1.44
TRAPPC11-203ENST00000504526 STAT5BP51692 787 aa24.02■■□□□ 1.44
TRAPPC11-203ENST00000504526 ADAM17P78536 824 aa24.02■■□□□ 1.44
TRAPPC11-203ENST00000504526 PPFIA1Q13136 1202 aa24.02■■□□□ 1.44
TRAPPC11-203ENST00000504526 IL27Q8NEV9 243 aa24.02■■□□□ 1.44
TRAPPC11-203ENST00000504526 LMBR1Q8WVP7 490 aa24.02■■□□□ 1.44
TRAPPC11-203ENST00000504526 PCYT2Q99447 389 aa24.02■■□□□ 1.44
TRAPPC11-203ENST00000504526 KCNJ14Q9UNX9 436 aa24.02■■□□□ 1.44
TRAPPC11-203ENST00000504526 IGKV6D-21A0A0A0MT36 114 aa24.01■■□□□ 1.43
TRAPPC11-203ENST00000504526 DDX39AO00148 427 aaKnown RBP24.01■■□□□ 1.43
TRAPPC11-203ENST00000504526 CCNE2O96020 404 aa24.01■■□□□ 1.43
TRAPPC11-203ENST00000504526 MARK3P27448 753 aa24.01■■□□□ 1.43
TRAPPC11-203ENST00000504526 THPOP40225 353 aa24.01■■□□□ 1.43
TRAPPC11-203ENST00000504526 KRT76Q01546 638 aa24.01■■□□□ 1.43
TRAPPC11-203ENST00000504526 ZNF618Q5T7W0 954 aa24.01■■□□□ 1.43
TRAPPC11-203ENST00000504526 FAM160B1Q5W0V3 765 aa24.01■■□□□ 1.43
TRAPPC11-203ENST00000504526 ZNF746Q6NUN9 644 aaPredicted RBP24.01■■□□□ 1.43
TRAPPC11-203ENST00000504526 MIS18BP1Q6P0N0 1132 aa24.01■■□□□ 1.43
TRAPPC11-203ENST00000504526 MOXD1Q6UVY6 613 aa24.01■■□□□ 1.43
TRAPPC11-203ENST00000504526 NSUN7Q8NE18 718 aaKnown RBP24.01■■□□□ 1.43
TRAPPC11-203ENST00000504526 WNT8BQ93098 351 aa24.01■■□□□ 1.43
TRAPPC11-203ENST00000504526 LENG9Q96B70 501 aa24.01■■□□□ 1.43
TRAPPC11-203ENST00000504526 ZSCAN31Q96LW9 406 aaPredicted RBP24.01■■□□□ 1.43
TRAPPC11-203ENST00000504526 KIF2CQ99661 725 aa24.01■■□□□ 1.43
TRAPPC11-203ENST00000504526 CXXC1Q9P0U4 656 aaPredicted RBP24.01■■□□□ 1.43
TRAPPC11-203ENST00000504526 SLC4A7Q9Y6M7 1214 aa24.01■■□□□ 1.43
TRAPPC11-203ENST00000504526 LAMA3Q16787 3333 aa24.01■■□□□ 1.43
TRAPPC11-203ENST00000504526 CCDC194A0A1B0GVG4 234 aa24■■□□□ 1.43
TRAPPC11-203ENST00000504526 RRN3P2A6NIE6 340 aa24■■□□□ 1.43
TRAPPC11-203ENST00000504526 ZBBXA8MT70 800 aa24■■□□□ 1.43
TRAPPC11-203ENST00000504526 BAIAP3O94812 1187 aa24■■□□□ 1.43
TRAPPC11-203ENST00000504526 CXCL10P02778 98 aa24■■□□□ 1.43
TRAPPC11-203ENST00000504526 FDPSP14324 419 aaKnown RBP24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms